RNA–Protein interactions for RNA: ENST00000468892.5

ABCF3-207, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 1,360 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-207ENST00000468892 SERP2Q8N6R1 65 aa10.71□□□□□ -0.69
ABCF3-207ENST00000468892 IGHV6-1A0A0B4J1U7 121 aa10.7□□□□□ -0.7
ABCF3-207ENST00000468892 TRAV7A0A075B6U4 112 aa10.69□□□□□ -0.7
ABCF3-207ENST00000468892 C8orf87E5RJ46 101 aa10.69□□□□□ -0.7
ABCF3-207ENST00000468892 KRTAP10-8P60410 259 aa10.69□□□□□ -0.7
ABCF3-207ENST00000468892 WFDC13Q8IUB5 93 aa10.68□□□□□ -0.7
ABCF3-207ENST00000468892 C8orf17Q9NRJ1 99 aa10.68□□□□□ -0.7
ABCF3-207ENST00000468892 PKHD1L1Q86WI1 4243 aa10.67□□□□□ -0.7
ABCF3-207ENST00000468892 hDV103S1A0JD37 113 aa10.66□□□□□ -0.7
ABCF3-207ENST00000468892 ABCA13Q86UQ4 5058 aa10.66□□□□□ -0.7
ABCF3-207ENST00000468892 MMP24-AS1A0A0U1RRL7 71 aa10.65□□□□□ -0.7
ABCF3-207ENST00000468892 COX7CP15954 63 aa10.65□□□□□ -0.7
ABCF3-207ENST00000468892 KRTAP29-1A8MX34 341 aaPredicted RBP10.65□□□□□ -0.71
ABCF3-207ENST00000468892 UQCRQO14949 82 aa10.65□□□□□ -0.71
ABCF3-207ENST00000468892 OXTP01178 125 aa10.62□□□□□ -0.71
ABCF3-207ENST00000468892 TMEM254Q8TBM7 123 aa10.61□□□□□ -0.71
ABCF3-207ENST00000468892 LINC00313P59037 77 aa10.6□□□□□ -0.71
ABCF3-207ENST00000468892 OCR1Q9BZK8 76 aa10.6□□□□□ -0.71
ABCF3-207ENST00000468892 MRPL34Q9BQ48 92 aaKnown RBP10.57□□□□□ -0.72
ABCF3-207ENST00000468892 TP53AIP1Q9HCN2 124 aa10.56□□□□□ -0.72
ABCF3-207ENST00000468892 CCDC179H3BU77 68 aa10.52□□□□□ -0.72
ABCF3-207ENST00000468892 C5orf47Q569G3 176 aa10.52□□□□□ -0.73
ABCF3-207ENST00000468892 NOTCH2NLQ7Z3S9 236 aa10.52□□□□□ -0.73
ABCF3-207ENST00000468892 NDUFS5O43920 106 aa10.51□□□□□ -0.73
ABCF3-207ENST00000468892 MT1HL1P0DM35 61 aa10.48□□□□□ -0.73
ABCF3-207ENST00000468892 FP248Q71RG6 208 aaPredicted RBP10.48□□□□□ -0.73
ABCF3-207ENST00000468892 MP68P56378 58 aa10.46□□□□□ -0.74
ABCF3-207ENST00000468892 C20orf197Q8N268 126 aa10.46□□□□□ -0.74
ABCF3-207ENST00000468892 FLG2Q5D862 2391 aaPredicted RBP10.45□□□□□ -0.74
ABCF3-207ENST00000468892 KRTAP4-5Q9BYR2 181 aa10.45□□□□□ -0.74
ABCF3-207ENST00000468892 HERC1Q15751 4861 aa10.45□□□□□ -0.74
ABCF3-207ENST00000468892 RETNLBQ9BQ08 111 aa10.43□□□□□ -0.74
ABCF3-207ENST00000468892 H3BPC8 53 aa10.42□□□□□ -0.74
ABCF3-207ENST00000468892 Q8N9P0 234 aaPredicted RBP10.42□□□□□ -0.74
ABCF3-207ENST00000468892 KLKP1Q107X0 134 aa10.41□□□□□ -0.74
ABCF3-207ENST00000468892 TRAV22A0A0B4J277 110 aa10.4□□□□□ -0.74
ABCF3-207ENST00000468892 KRTAP16-1A8MUX0 517 aa10.39□□□□□ -0.75
ABCF3-207ENST00000468892 H0Y9P7 68 aa10.39□□□□□ -0.75
ABCF3-207ENST00000468892 NDUFC1O43677 76 aa10.39□□□□□ -0.75
ABCF3-207ENST00000468892 A0A0U1RQV1 116 aa10.37□□□□□ -0.75
ABCF3-207ENST00000468892 SNURFQ9Y675 71 aa10.35□□□□□ -0.75
ABCF3-207ENST00000468892 FAT3Q8TDW7 4589 aa10.33□□□□□ -0.76
ABCF3-207ENST00000468892 DMBT1Q9UGM3 2413 aaPredicted RBP10.33□□□□□ -0.76
ABCF3-207ENST00000468892 LRP1Q07954 4544 aaKnown RBP10.33□□□□□ -0.76
ABCF3-207ENST00000468892 IGLV7-46A0A075B6I9 117 aa10.33□□□□□ -0.76
ABCF3-207ENST00000468892 J3QL48 77 aa10.33□□□□□ -0.76
ABCF3-207ENST00000468892 TNXBP22105 4242 aa10.33□□□□□ -0.76
ABCF3-207ENST00000468892 C9orf92A6NGG3 77 aa10.32□□□□□ -0.76
ABCF3-207ENST00000468892 LINC00208Q96KT6 92 aa10.31□□□□□ -0.76
ABCF3-207ENST00000468892 C1orf64Q8NEQ6 169 aa10.29□□□□□ -0.76
ABCF3-207ENST00000468892 ZCCHC13Q8WW36 166 aaKnown RBP10.27□□□□□ -0.76
ABCF3-207ENST00000468892 C20orf166-AS1Q96NR2 134 aa10.26□□□□□ -0.77
ABCF3-207ENST00000468892 A8MUU9 505 aa10.26□□□□□ -0.77
ABCF3-207ENST00000468892 LOC101927531A0A1B0GV80 90 aa10.25□□□□□ -0.77
ABCF3-207ENST00000468892 TMEM258P61165 79 aa10.25□□□□□ -0.77
ABCF3-207ENST00000468892 PRR4Q16378 134 aa10.25□□□□□ -0.77
ABCF3-207ENST00000468892 H7BZZ5 65 aa10.23□□□□□ -0.77
ABCF3-207ENST00000468892 CYSTM1Q9H1C7 97 aa10.23□□□□□ -0.77
ABCF3-207ENST00000468892 Q5W150 140 aa10.22□□□□□ -0.77
ABCF3-207ENST00000468892 KRTAP13-3Q3SY46 172 aa10.21□□□□□ -0.78
ABCF3-207ENST00000468892 Q75L30 129 aa10.2□□□□□ -0.78
ABCF3-207ENST00000468892 MYCBP2O75592 4640 aa10.2□□□□□ -0.78
ABCF3-207ENST00000468892 ATP5EP56381 51 aaPredicted RBP10.16□□□□□ -0.78
ABCF3-207ENST00000468892 TPRXLQ17RH7 258 aa10.14□□□□□ -0.79
ABCF3-207ENST00000468892 FAM236DA0A1B0GTK5 79 aa10.12□□□□□ -0.79
ABCF3-207ENST00000468892 FAM236CP0DP71 79 aa10.12□□□□□ -0.79
ABCF3-207ENST00000468892 CYP4F30PQ9H0H9 118 aa10.12□□□□□ -0.79
ABCF3-207ENST00000468892 IGKV2-30P06310 120 aa10.11□□□□□ -0.79
ABCF3-207ENST00000468892 ATP11AUNQ6ZP68 121 aa10.1□□□□□ -0.79
ABCF3-207ENST00000468892 XP32Q5T750 250 aa10.09□□□□□ -0.79
ABCF3-207ENST00000468892 SPANXA2-OT1Q8N9U9 137 aa10.09□□□□□ -0.79
ABCF3-207ENST00000468892 RPL37P61927 97 aaKnown RBP10.08□□□□□ -0.8
ABCF3-207ENST00000468892 PCOTHQ58A44 107 aa10.06□□□□□ -0.8
ABCF3-207ENST00000468892 IGKV2D-30A0A075B6S6 120 aa10.05□□□□□ -0.8
ABCF3-207ENST00000468892 C7orf65Q6ZTY9 151 aa10.05□□□□□ -0.8
ABCF3-207ENST00000468892 UBR4Q5T4S7 5183 aa10.03□□□□□ -0.8
ABCF3-207ENST00000468892 SERP1Q9Y6X1 66 aa9.94□□□□□ -0.82
ABCF3-207ENST00000468892 HRES1P13985 223 aa9.93□□□□□ -0.82
ABCF3-207ENST00000468892 SPINK7P58062 85 aa9.92□□□□□ -0.82
ABCF3-207ENST00000468892 RPS28P62857 69 aaKnown RBP9.92□□□□□ -0.82
ABCF3-207ENST00000468892 SEC61BP60468 96 aaKnown RBP9.86□□□□□ -0.83
ABCF3-207ENST00000468892 ACYP2P14621 99 aa9.82□□□□□ -0.84
ABCF3-207ENST00000468892 DMAC1Q96GE9 116 aa9.81□□□□□ -0.84
ABCF3-207ENST00000468892 A8MUN3 132 aa9.8□□□□□ -0.84
ABCF3-207ENST00000468892 HMCN2Q8NDA2 5059 aa9.8□□□□□ -0.84
ABCF3-207ENST00000468892 C4orf26Q17RF5 130 aa9.75□□□□□ -0.85
ABCF3-207ENST00000468892 COA5Q86WW8 74 aa9.74□□□□□ -0.85
ABCF3-207ENST00000468892 COX6B2Q6YFQ2 88 aa9.7□□□□□ -0.86
ABCF3-207ENST00000468892 SMIM26A0A096LP01 95 aa9.68□□□□□ -0.86
ABCF3-207ENST00000468892 CHKB-CPT1BH3BT56 60 aa9.67□□□□□ -0.86
ABCF3-207ENST00000468892 RBM12B-AS1Q9P1G2 102 aa9.62□□□□□ -0.87
ABCF3-207ENST00000468892 LPAP08519 4548 aa9.57□□□□□ -0.88
ABCF3-207ENST00000468892 SPTSSBQ8NFR3 76 aa9.56□□□□□ -0.88
ABCF3-207ENST00000468892 LRP2P98164 4655 aa9.56□□□□□ -0.88
ABCF3-207ENST00000468892 KRTAP3-1Q9BYR8 98 aa9.55□□□□□ -0.88
ABCF3-207ENST00000468892 RNF213Q63HN8 5207 aa9.54□□□□□ -0.88
ABCF3-207ENST00000468892 V9GYY9 64 aa9.54□□□□□ -0.88
ABCF3-207ENST00000468892 MPLKIPQ8TAP9 179 aa9.53□□□□□ -0.88
ABCF3-207ENST00000468892 H1FX-AS1Q4G0G2 97 aa9.49□□□□□ -0.89
ABCF3-207ENST00000468892 Q1T7F1 81 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms