RNA–Protein interactions for RNA: ENST00000467371.1

SPTBN1-204, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 3,332 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-204ENST00000467371 SPART-AS1P0CW21 52 aa4.57□□□□□ -1.68
SPTBN1-204ENST00000467371 WFDC10BQ8IUB3 73 aa4.57□□□□□ -1.68
SPTBN1-204ENST00000467371 H0Y9P7 68 aa4.56□□□□□ -1.68
SPTBN1-204ENST00000467371 STAB2Q8WWQ8 2551 aa4.55□□□□□ -1.68
SPTBN1-204ENST00000467371 KRTAP21-3Q3LHN1 58 aa4.55□□□□□ -1.68
SPTBN1-204ENST00000467371 DEFB105AQ8NG35 78 aa4.54□□□□□ -1.68
SPTBN1-204ENST00000467371 C6orf48Q9UBA6 75 aa4.54□□□□□ -1.68
SPTBN1-204ENST00000467371 KRTAP10-11P60412 298 aa4.52□□□□□ -1.69
SPTBN1-204ENST00000467371 KRTAP24-1Q3LI83 254 aa4.51□□□□□ -1.69
SPTBN1-204ENST00000467371 WFDC13Q8IUB5 93 aa4.5□□□□□ -1.69
SPTBN1-204ENST00000467371 DEFB131BA0A096LNP1 70 aa4.5□□□□□ -1.69
SPTBN1-204ENST00000467371 ALMS1Q8TCU4 4167 aa4.5□□□□□ -1.69
SPTBN1-204ENST00000467371 PRO2289Q9P1D8 64 aa4.48□□□□□ -1.69
SPTBN1-204ENST00000467371 ZNF861PO60384 105 aa4.47□□□□□ -1.69
SPTBN1-204ENST00000467371 LELP1Q5T871 98 aa4.47□□□□□ -1.69
SPTBN1-204ENST00000467371 IGKV2-24A0A0C4DH68 120 aa4.47□□□□□ -1.69
SPTBN1-204ENST00000467371 HRES1P13985 223 aa4.47□□□□□ -1.69
SPTBN1-204ENST00000467371 Q6ZRX8 168 aa4.46□□□□□ -1.69
SPTBN1-204ENST00000467371 A0A087WTM6 91 aa4.46□□□□□ -1.7
SPTBN1-204ENST00000467371 SPATA8Q6RVD6 105 aa4.46□□□□□ -1.7
SPTBN1-204ENST00000467371 ANK2Q01484 3957 aa4.45□□□□□ -1.7
SPTBN1-204ENST00000467371 SPRR1AP35321 89 aa4.45□□□□□ -1.7
SPTBN1-204ENST00000467371 SRRM2Q9UQ35 2752 aaKnown RBP4.45□□□□□ -1.7
SPTBN1-204ENST00000467371 COL7A1Q02388 2944 aa4.44□□□□□ -1.7
SPTBN1-204ENST00000467371 PSORS1C2Q9UIG4 136 aa4.43□□□□□ -1.7
SPTBN1-204ENST00000467371 A0A0G2JQZ4 141 aa4.43□□□□□ -1.7
SPTBN1-204ENST00000467371 A0A1W2PNN7 141 aa4.43□□□□□ -1.7
SPTBN1-204ENST00000467371 R4GN34 69 aa4.43□□□□□ -1.7
SPTBN1-204ENST00000467371 A0A096LNI7 61 aa4.42□□□□□ -1.7
SPTBN1-204ENST00000467371 RPL37AP61513 92 aaKnown RBP4.42□□□□□ -1.7
SPTBN1-204ENST00000467371 IGFL1Q6UW32 110 aa4.42□□□□□ -1.7
SPTBN1-204ENST00000467371 UQCR11O14957 56 aa4.41□□□□□ -1.7
SPTBN1-204ENST00000467371 UBE2DNLQ8IWF7 75 aa4.41□□□□□ -1.7
SPTBN1-204ENST00000467371 MMP24-AS1A0A0U1RRL7 71 aa4.39□□□□□ -1.71
SPTBN1-204ENST00000467371 LINC00472Q9H8W2 130 aa4.39□□□□□ -1.71
SPTBN1-204ENST00000467371 TP53AIP1Q9HCN2 124 aa4.39□□□□□ -1.71
SPTBN1-204ENST00000467371 PCOTHQ58A44 107 aa4.39□□□□□ -1.71
SPTBN1-204ENST00000467371 NBDYA0A0U1RRE5 68 aa4.38□□□□□ -1.71
SPTBN1-204ENST00000467371 TGP01266 2768 aa4.37□□□□□ -1.71
SPTBN1-204ENST00000467371 LYSTQ99698 3801 aa4.37□□□□□ -1.71
SPTBN1-204ENST00000467371 PRLHP81277 87 aa4.36□□□□□ -1.71
SPTBN1-204ENST00000467371 K7EIL1 84 aa4.35□□□□□ -1.71
SPTBN1-204ENST00000467371 TPRXLQ17RH7 258 aa4.32□□□□□ -1.72
SPTBN1-204ENST00000467371 LINC01556Q5JQF7 62 aa4.32□□□□□ -1.72
SPTBN1-204ENST00000467371 KRTAP7-1Q8IUC3 87 aa4.32□□□□□ -1.72
SPTBN1-204ENST00000467371 SPACA4Q8TDM5 124 aa4.31□□□□□ -1.72
SPTBN1-204ENST00000467371 Q96NJ1 140 aa4.31□□□□□ -1.72
SPTBN1-204ENST00000467371 KRTAP1-5Q9BYS1 174 aa4.31□□□□□ -1.72
SPTBN1-204ENST00000467371 A0A1B0GU69 56 aa4.3□□□□□ -1.72
SPTBN1-204ENST00000467371 ACYP2P14621 99 aa4.3□□□□□ -1.72
SPTBN1-204ENST00000467371 SPINT4Q6UDR6 99 aa4.29□□□□□ -1.72
SPTBN1-204ENST00000467371 DNAH10Q8IVF4 4471 aa4.28□□□□□ -1.72
SPTBN1-204ENST00000467371 SPRR1BP22528 89 aa4.28□□□□□ -1.72
SPTBN1-204ENST00000467371 KRTAP13-3Q3SY46 172 aa4.27□□□□□ -1.73
SPTBN1-204ENST00000467371 DNAH3Q8TD57 4116 aa4.25□□□□□ -1.73
SPTBN1-204ENST00000467371 LINC00304Q8N9R0 145 aa4.25□□□□□ -1.73
SPTBN1-204ENST00000467371 H3BNG1 76 aa4.24□□□□□ -1.73
SPTBN1-204ENST00000467371 ANAPC11Q9NYG5 84 aa4.24□□□□□ -1.73
SPTBN1-204ENST00000467371 DNAH1Q9P2D7 4330 aa4.23□□□□□ -1.73
SPTBN1-204ENST00000467371 MRPL34Q9BQ48 92 aaKnown RBP4.23□□□□□ -1.73
SPTBN1-204ENST00000467371 KRTAP11-1Q8IUC1 163 aa4.22□□□□□ -1.73
SPTBN1-204ENST00000467371 LY6G6CO95867 125 aa4.2□□□□□ -1.74
SPTBN1-204ENST00000467371 HUWE1Q7Z6Z7 4374 aaKnown RBP4.2□□□□□ -1.74
SPTBN1-204ENST00000467371 FBN3Q75N90 2809 aa4.2□□□□□ -1.74
SPTBN1-204ENST00000467371 CMYA5Q8N3K9 4069 aa4.19□□□□□ -1.74
SPTBN1-204ENST00000467371 SPINK6Q6UWN8 80 aa4.18□□□□□ -1.74
SPTBN1-204ENST00000467371 DNAH7Q8WXX0 4024 aa4.18□□□□□ -1.74
SPTBN1-204ENST00000467371 MEGF8Q7Z7M0 2845 aa4.17□□□□□ -1.74
SPTBN1-204ENST00000467371 IGKV2-30P06310 120 aa4.16□□□□□ -1.74
SPTBN1-204ENST00000467371 APLNQ9ULZ1 77 aa4.16□□□□□ -1.74
SPTBN1-204ENST00000467371 C14orf177Q52M58 125 aa4.15□□□□□ -1.74
SPTBN1-204ENST00000467371 DNAH9Q9NYC9 4486 aa4.15□□□□□ -1.75
SPTBN1-204ENST00000467371 KRTAP10-8P60410 259 aa4.12□□□□□ -1.75
SPTBN1-204ENST00000467371 PLECQ15149 4684 aaKnown RBP4.12□□□□□ -1.75
SPTBN1-204ENST00000467371 DNHD1Q96M86 4753 aa4.12□□□□□ -1.75
SPTBN1-204ENST00000467371 KRTAP10-2P60368 255 aa4.11□□□□□ -1.75
SPTBN1-204ENST00000467371 H0YAA0 97 aa4.1□□□□□ -1.75
SPTBN1-204ENST00000467371 PRKDCP78527 4128 aaKnown RBP4.09□□□□□ -1.75
SPTBN1-204ENST00000467371 KRTAP13-1Q8IUC0 172 aa4.09□□□□□ -1.76
SPTBN1-204ENST00000467371 KMT2AQ03164 3969 aa4.09□□□□□ -1.76
SPTBN1-204ENST00000467371 STARD9Q9P2P6 4700 aa4.08□□□□□ -1.76
SPTBN1-204ENST00000467371 INE1O15225 51 aa4.07□□□□□ -1.76
SPTBN1-204ENST00000467371 Q6ZSA8 131 aa4.07□□□□□ -1.76
SPTBN1-204ENST00000467371 FRAS1Q86XX4 4008 aa4.06□□□□□ -1.76
SPTBN1-204ENST00000467371 Q6ZRN7 208 aaPredicted RBP4.03□□□□□ -1.76
SPTBN1-204ENST00000467371 IGKV2D-30A0A075B6S6 120 aa4.03□□□□□ -1.76
SPTBN1-204ENST00000467371 SMR3BP02814 79 aaPredicted RBP4.01□□□□□ -1.77
SPTBN1-204ENST00000467371 CRIPTQ9P021 101 aa3.97□□□□□ -1.77
SPTBN1-204ENST00000467371 SSBP3-AS1Q7Z2R9 100 aa3.96□□□□□ -1.77
SPTBN1-204ENST00000467371 DNAH6Q9C0G6 4158 aa3.96□□□□□ -1.78
SPTBN1-204ENST00000467371 H1FX-AS1Q4G0G2 97 aa3.96□□□□□ -1.78
SPTBN1-204ENST00000467371 FLG2Q5D862 2391 aaPredicted RBP3.95□□□□□ -1.78
SPTBN1-204ENST00000467371 KRTAP10-1P60331 282 aa3.95□□□□□ -1.78
SPTBN1-204ENST00000467371 DNAH11Q96DT5 4516 aa3.94□□□□□ -1.78
SPTBN1-204ENST00000467371 DNAH8Q96JB1 4490 aa3.94□□□□□ -1.78
SPTBN1-204ENST00000467371 VPS13DQ5THJ4 4388 aa3.94□□□□□ -1.78
SPTBN1-204ENST00000467371 KRTAP19-4Q3LI73 84 aa3.93□□□□□ -1.78
SPTBN1-204ENST00000467371 HYDINQ4G0P3 5121 aa3.93□□□□□ -1.78
SPTBN1-204ENST00000467371 DNAH2Q9P225 4427 aa3.93□□□□□ -1.78
SPTBN1-204ENST00000467371 DYNC2H1Q8NCM8 4307 aaKnown RBP3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms