RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 SPAG11AQ6PDA7 123 aa3.2□□□□□ -1.9
VPS41-211ENST00000466017 A0A087X002 238 aa3.19□□□□□ -1.9
VPS41-211ENST00000466017 IGLV9-49A0A0B4J1Y8 123 aa3.19□□□□□ -1.9
VPS41-211ENST00000466017 KRTAP10-8P60410 259 aa3.19□□□□□ -1.9
VPS41-211ENST00000466017 RPS29P62273 56 aaKnown RBP3.19□□□□□ -1.9
VPS41-211ENST00000466017 MOBPQ13875 183 aa3.19□□□□□ -1.9
VPS41-211ENST00000466017 ASB16-AS1Q495Z4 193 aa3.19□□□□□ -1.9
VPS41-211ENST00000466017 Q75L30 129 aa3.19□□□□□ -1.9
VPS41-211ENST00000466017 ANAPC11Q9NYG5 84 aa3.19□□□□□ -1.9
VPS41-211ENST00000466017 BIRC6Q9NR09 4857 aa3.19□□□□□ -1.9
VPS41-211ENST00000466017 KIAA1109Q2LD37 5005 aa3.19□□□□□ -1.9
VPS41-211ENST00000466017 SPINK1P00995 79 aa3.18□□□□□ -1.9
VPS41-211ENST00000466017 C9orf153Q5TBE3 101 aa3.18□□□□□ -1.9
VPS41-211ENST00000466017 NOTCH2NLQ7Z3S9 236 aa3.18□□□□□ -1.9
VPS41-211ENST00000466017 LINC00643Q86TS7 51 aa3.18□□□□□ -1.9
VPS41-211ENST00000466017 TYMSOSQ8TAI1 123 aa3.18□□□□□ -1.9
VPS41-211ENST00000466017 UBL5Q9BZL1 73 aa3.18□□□□□ -1.9
VPS41-211ENST00000466017 LINC00846Q9NV44 126 aa3.18□□□□□ -1.9
VPS41-211ENST00000466017 OXTP01178 125 aa3.17□□□□□ -1.9
VPS41-211ENST00000466017 SS18L2Q9UHA2 77 aa3.17□□□□□ -1.9
VPS41-211ENST00000466017 NREPQ16612 68 aa3.16□□□□□ -1.9
VPS41-211ENST00000466017 Q6ZVQ6 151 aa3.16□□□□□ -1.9
VPS41-211ENST00000466017 A0A087WSZ3 146 aa3.15□□□□□ -1.91
VPS41-211ENST00000466017 A0A1B0GV72 72 aa3.15□□□□□ -1.91
VPS41-211ENST00000466017 J3KT08 172 aa3.15□□□□□ -1.91
VPS41-211ENST00000466017 VPS25Q9BRG1 176 aa3.15□□□□□ -1.91
VPS41-211ENST00000466017 IMUPQ9GZP8 106 aa3.15□□□□□ -1.91
VPS41-211ENST00000466017 LINC00472Q9H8W2 130 aa3.15□□□□□ -1.91
VPS41-211ENST00000466017 FAT3Q8TDW7 4589 aa3.15□□□□□ -1.91
VPS41-211ENST00000466017 A0A0G2JQZ4 141 aa3.14□□□□□ -1.91
VPS41-211ENST00000466017 CXCL6P80162 114 aa3.14□□□□□ -1.91
VPS41-211ENST00000466017 LCE3CQ5T5A8 94 aa3.14□□□□□ -1.91
VPS41-211ENST00000466017 ATP5EP2Q5VTU8 51 aa3.14□□□□□ -1.91
VPS41-211ENST00000466017 LINC00304Q8N9R0 145 aa3.14□□□□□ -1.91
VPS41-211ENST00000466017 LIMD2Q9BT23 127 aa3.14□□□□□ -1.91
VPS41-211ENST00000466017 SIGMAR1Q99720 223 aa3.13□□□□□ -1.91
VPS41-211ENST00000466017 SRRM2Q9UQ35 2752 aaKnown RBP3.13□□□□□ -1.91
VPS41-211ENST00000466017 HERC2O95714 4834 aa3.13□□□□□ -1.91
VPS41-211ENST00000466017 BPY2O14599 106 aa3.12□□□□□ -1.91
VPS41-211ENST00000466017 MT1HL1P0DM35 61 aa3.12□□□□□ -1.91
VPS41-211ENST00000466017 Q96NJ1 140 aa3.12□□□□□ -1.91
VPS41-211ENST00000466017 HRCT1Q6UXD1 115 aa3.11□□□□□ -1.91
VPS41-211ENST00000466017 TNXBP22105 4242 aa3.11□□□□□ -1.91
VPS41-211ENST00000466017 A8MWP4 228 aa3.1□□□□□ -1.91
VPS41-211ENST00000466017 DSCR10P59022 87 aa3.1□□□□□ -1.91
VPS41-211ENST00000466017 C1orf195Q5TG92 126 aa3.1□□□□□ -1.91
VPS41-211ENST00000466017 LRP1Q07954 4544 aaKnown RBP3.09□□□□□ -1.91
VPS41-211ENST00000466017 KRTAP16-1A8MUX0 517 aa3.09□□□□□ -1.91
VPS41-211ENST00000466017 NDUFB1O75438 58 aa3.09□□□□□ -1.91
VPS41-211ENST00000466017 IGKV3D-7A0A0C4DH55 119 aa3.08□□□□□ -1.92
VPS41-211ENST00000466017 KRTAP9-6A8MVA2 160 aa3.08□□□□□ -1.92
VPS41-211ENST00000466017 MT-ATP8P03928 68 aa3.08□□□□□ -1.92
VPS41-211ENST00000466017 IGKV4-1P06312 121 aa3.08□□□□□ -1.92
VPS41-211ENST00000466017 FP248Q71RG6 208 aaPredicted RBP3.08□□□□□ -1.92
VPS41-211ENST00000466017 PRR15Q8IV56 129 aa3.08□□□□□ -1.92
VPS41-211ENST00000466017 PRAC1Q96KF2 57 aa3.08□□□□□ -1.92
VPS41-211ENST00000466017 FLG2Q5D862 2391 aaPredicted RBP3.07□□□□□ -1.92
VPS41-211ENST00000466017 C8orf87E5RJ46 101 aa3.07□□□□□ -1.92
VPS41-211ENST00000466017 SCGB1A1P11684 91 aa3.07□□□□□ -1.92
VPS41-211ENST00000466017 A0A1B0GVX0 72 aa3.06□□□□□ -1.92
VPS41-211ENST00000466017 DEFB116Q30KQ4 102 aa3.06□□□□□ -1.92
VPS41-211ENST00000466017 MYCBP2O75592 4640 aa3.05□□□□□ -1.92
VPS41-211ENST00000466017 K7EQZ3 153 aa3.05□□□□□ -1.92
VPS41-211ENST00000466017 HIST1H4AP62805 103 aaKnown RBP3.05□□□□□ -1.92
VPS41-211ENST00000466017 DMBT1Q9UGM3 2413 aaPredicted RBP3.05□□□□□ -1.92
VPS41-211ENST00000466017 C8orf17Q9NRJ1 99 aa3.04□□□□□ -1.92
VPS41-211ENST00000466017 MMP24-AS1A0A0U1RRL7 71 aa3.03□□□□□ -1.92
VPS41-211ENST00000466017 HCG22E2RYF7 251 aa3.03□□□□□ -1.92
VPS41-211ENST00000466017 LINC00313P59037 77 aa3.03□□□□□ -1.92
VPS41-211ENST00000466017 TMEM254Q8TBM7 123 aa3.03□□□□□ -1.92
VPS41-211ENST00000466017 hDV103S1A0JD37 113 aa3.02□□□□□ -1.93
VPS41-211ENST00000466017 SMIM20Q8N5G0 67 aa3.02□□□□□ -1.93
VPS41-211ENST00000466017 Q8N9L7 120 aa3.02□□□□□ -1.93
VPS41-211ENST00000466017 A0A087WVE0 104 aa3.01□□□□□ -1.93
VPS41-211ENST00000466017 IGHV6-1A0A0B4J1U7 121 aa3.01□□□□□ -1.93
VPS41-211ENST00000466017 CASC2Q6XLA1 102 aa3.01□□□□□ -1.93
VPS41-211ENST00000466017 MRPL34Q9BQ48 92 aaKnown RBP3.01□□□□□ -1.93
VPS41-211ENST00000466017 TP53AIP1Q9HCN2 124 aa3.01□□□□□ -1.93
VPS41-211ENST00000466017 ABCA13Q86UQ4 5058 aa3□□□□□ -1.93
VPS41-211ENST00000466017 IGLV7-46A0A075B6I9 117 aa3□□□□□ -1.93
VPS41-211ENST00000466017 ATOX1O00244 68 aa3□□□□□ -1.93
VPS41-211ENST00000466017 FAM236AA0A1B0GUQ0 79 aa2.99□□□□□ -1.93
VPS41-211ENST00000466017 FAM236BA0A1B0GV22 79 aa2.99□□□□□ -1.93
VPS41-211ENST00000466017 TPRXLQ17RH7 258 aa2.99□□□□□ -1.93
VPS41-211ENST00000466017 C20orf166-AS1Q96NR2 134 aa2.99□□□□□ -1.93
VPS41-211ENST00000466017 TRAV7A0A075B6U4 112 aa2.98□□□□□ -1.93
VPS41-211ENST00000466017 A8MUU9 505 aa2.98□□□□□ -1.93
VPS41-211ENST00000466017 UQCRQO14949 82 aa2.98□□□□□ -1.93
VPS41-211ENST00000466017 KRTAP13-3Q3SY46 172 aa2.98□□□□□ -1.93
VPS41-211ENST00000466017 WFDC13Q8IUB5 93 aa2.98□□□□□ -1.93
VPS41-211ENST00000466017 RETNLBQ9BQ08 111 aa2.98□□□□□ -1.93
VPS41-211ENST00000466017 OCR1Q9BZK8 76 aa2.98□□□□□ -1.93
VPS41-211ENST00000466017 C5orf47Q569G3 176 aa2.97□□□□□ -1.93
VPS41-211ENST00000466017 H3BPC8 53 aa2.96□□□□□ -1.94
VPS41-211ENST00000466017 PRR4Q16378 134 aa2.96□□□□□ -1.94
VPS41-211ENST00000466017 SERP2Q8N6R1 65 aa2.96□□□□□ -1.94
VPS41-211ENST00000466017 COX7CP15954 63 aa2.95□□□□□ -1.94
VPS41-211ENST00000466017 KRTAP5-1Q6L8H4 278 aa2.95□□□□□ -1.94
VPS41-211ENST00000466017 PCLOQ9Y6V0 5065 aa2.93□□□□□ -1.94
VPS41-211ENST00000466017 C9orf92A6NGG3 77 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms