RNA–Protein interactions for RNA: ENST00000465655.2

RPL39P28-201, Transcript of ribosomal protein L39 pseudogene 28, humanhuman

BASIC

Gene RPL39P28, Length 155 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P28-201ENST00000465655 FBN1P35555 2871 aaKnown RBP0.4□□□□□ -2.34
RPL39P28-201ENST00000465655 BAHCC1Q9P281 2608 aa0.4□□□□□ -2.34
RPL39P28-201ENST00000465655 CELSR3Q9NYQ7 3312 aa0.4□□□□□ -2.34
RPL39P28-201ENST00000465655 TRANK1O15050 2925 aa0.4□□□□□ -2.35
RPL39P28-201ENST00000465655 ROS1P08922 2347 aa0.4□□□□□ -2.35
RPL39P28-201ENST00000465655 HERC1Q15751 4861 aa0.4□□□□□ -2.35
RPL39P28-201ENST00000465655 KRTAP10-11P60412 298 aa0.4□□□□□ -2.35
RPL39P28-201ENST00000465655 Q5VSD8 79 aa0.4□□□□□ -2.35
RPL39P28-201ENST00000465655 KRTAP1-5Q9BYS1 174 aa0.4□□□□□ -2.35
RPL39P28-201ENST00000465655 UBR5O95071 2799 aaPredicted RBP0.4□□□□□ -2.35
RPL39P28-201ENST00000465655 CHD9Q3L8U1 2897 aa0.4□□□□□ -2.35
RPL39P28-201ENST00000465655 FAT2Q9NYQ8 4349 aa0.4□□□□□ -2.35
RPL39P28-201ENST00000465655 AKAP13Q12802 2813 aa0.4□□□□□ -2.35
RPL39P28-201ENST00000465655 RP1L1Q8IWN7 2480 aaPredicted RBP0.4□□□□□ -2.35
RPL39P28-201ENST00000465655 CCDC168Q8NDH2 2452 aa0.4□□□□□ -2.35
RPL39P28-201ENST00000465655 FLGP20930 4061 aaPredicted RBP0.39□□□□□ -2.35
RPL39P28-201ENST00000465655 ZNF462Q96JM2 2506 aa0.39□□□□□ -2.35
RPL39P28-201ENST00000465655 COL6A5A8TX70 2615 aa0.39□□□□□ -2.35
RPL39P28-201ENST00000465655 CSMD2Q7Z408 3487 aa0.39□□□□□ -2.35
RPL39P28-201ENST00000465655 SVEP1Q4LDE5 3571 aa0.39□□□□□ -2.35
RPL39P28-201ENST00000465655 LRP1Q07954 4544 aaKnown RBP0.39□□□□□ -2.35
RPL39P28-201ENST00000465655 MUC3AQ02505 3323 aa0.39□□□□□ -2.35
RPL39P28-201ENST00000465655 SRRM2Q9UQ35 2752 aaKnown RBP0.39□□□□□ -2.35
RPL39P28-201ENST00000465655 SPRR5A0A1B0GTR4 108 aa0.39□□□□□ -2.35
RPL39P28-201ENST00000465655 TNP1P09430 55 aa0.39□□□□□ -2.35
RPL39P28-201ENST00000465655 KRTAP10-9P60411 292 aa0.39□□□□□ -2.35
RPL39P28-201ENST00000465655 FAM208BQ5VWN6 2430 aa0.39□□□□□ -2.35
RPL39P28-201ENST00000465655 GVINP1Q7Z2Y8 2422 aa0.39□□□□□ -2.35
RPL39P28-201ENST00000465655 TTC28Q96AY4 2481 aa0.39□□□□□ -2.35
RPL39P28-201ENST00000465655 ABCA12Q86UK0 2595 aa0.39□□□□□ -2.35
RPL39P28-201ENST00000465655 ABCA2Q9BZC7 2435 aa0.38□□□□□ -2.35
RPL39P28-201ENST00000465655 MAP1AP78559 2803 aaPredicted RBP0.38□□□□□ -2.35
RPL39P28-201ENST00000465655 COL7A1Q02388 2944 aa0.38□□□□□ -2.35
RPL39P28-201ENST00000465655 ITPR1Q14643 2758 aa0.38□□□□□ -2.35
RPL39P28-201ENST00000465655 NBASA2RRP1 2371 aa0.38□□□□□ -2.35
RPL39P28-201ENST00000465655 CACNA1HO95180 2353 aa0.38□□□□□ -2.35
RPL39P28-201ENST00000465655 A0A1B0GVY2 172 aa0.38□□□□□ -2.35
RPL39P28-201ENST00000465655 KRTAP10-1P60331 282 aa0.38□□□□□ -2.35
RPL39P28-201ENST00000465655 DCHS2Q6V1P9 2916 aa0.38□□□□□ -2.35
RPL39P28-201ENST00000465655 JMJD1CQ15652 2540 aa0.38□□□□□ -2.35
RPL39P28-201ENST00000465655 PKHD1P08F94 4074 aa0.38□□□□□ -2.35
RPL39P28-201ENST00000465655 EP300Q09472 2414 aaPredicted RBP0.38□□□□□ -2.35
RPL39P28-201ENST00000465655 MUC6Q6W4X9 2439 aa0.38□□□□□ -2.35
RPL39P28-201ENST00000465655 LRBAP50851 2863 aa0.38□□□□□ -2.35
RPL39P28-201ENST00000465655 STARD9Q9P2P6 4700 aa0.37□□□□□ -2.35
RPL39P28-201ENST00000465655 TACC2O95359 2948 aa0.37□□□□□ -2.35
RPL39P28-201ENST00000465655 FAM186AA6NE01 2351 aa0.37□□□□□ -2.35
RPL39P28-201ENST00000465655 VWFP04275 2813 aa0.37□□□□□ -2.35
RPL39P28-201ENST00000465655 KRTAP10-10P60014 251 aa0.37□□□□□ -2.35
RPL39P28-201ENST00000465655 KRTAP10-3P60369 221 aa0.37□□□□□ -2.35
RPL39P28-201ENST00000465655 EYSQ5T1H1 3165 aa0.37□□□□□ -2.35
RPL39P28-201ENST00000465655 NCOR2Q9Y618 2525 aa0.37□□□□□ -2.35
RPL39P28-201ENST00000465655 SONP18583 2426 aaKnown RBP0.37□□□□□ -2.35
RPL39P28-201ENST00000465655 SPG11Q96JI7 2443 aa0.37□□□□□ -2.35
RPL39P28-201ENST00000465655 TNXBP22105 4242 aa0.37□□□□□ -2.35
RPL39P28-201ENST00000465655 ADGRG4Q8IZF6 3080 aa0.36□□□□□ -2.35
RPL39P28-201ENST00000465655 TEX15Q9BXT5 2789 aa0.36□□□□□ -2.35
RPL39P28-201ENST00000465655 LRP1BQ9NZR2 4599 aa0.36□□□□□ -2.35
RPL39P28-201ENST00000465655 MUC17Q685J3 4493 aa0.36□□□□□ -2.35
RPL39P28-201ENST00000465655 NF1P21359 2839 aa0.36□□□□□ -2.35
RPL39P28-201ENST00000465655 MEGF8Q7Z7M0 2845 aa0.36□□□□□ -2.35
RPL39P28-201ENST00000465655 M0R2T5 61 aa0.36□□□□□ -2.35
RPL39P28-201ENST00000465655 MT3P25713 68 aa0.36□□□□□ -2.35
RPL39P28-201ENST00000465655 KRTAP10-2P60368 255 aa0.36□□□□□ -2.35
RPL39P28-201ENST00000465655 LPAP08519 4548 aa0.36□□□□□ -2.35
RPL39P28-201ENST00000465655 CEP290O15078 2479 aa0.36□□□□□ -2.35
RPL39P28-201ENST00000465655 RIF1Q5UIP0 2472 aaKnown RBP0.36□□□□□ -2.35
RPL39P28-201ENST00000465655 PKD1L2Q7Z442 2459 aa0.36□□□□□ -2.35
RPL39P28-201ENST00000465655 LRP2P98164 4655 aa0.35□□□□□ -2.35
RPL39P28-201ENST00000465655 PIEZO1Q92508 2521 aa0.35□□□□□ -2.35
RPL39P28-201ENST00000465655 DMBT1Q9UGM3 2413 aaPredicted RBP0.35□□□□□ -2.35
RPL39P28-201ENST00000465655 CHD8Q9HCK8 2581 aa0.35□□□□□ -2.35
RPL39P28-201ENST00000465655 KRTAP1-4P0C5Y4 121 aa0.35□□□□□ -2.35
RPL39P28-201ENST00000465655 RPS29P62273 56 aaKnown RBP0.35□□□□□ -2.35
RPL39P28-201ENST00000465655 LCE1AQ5T7P2 110 aa0.35□□□□□ -2.35
RPL39P28-201ENST00000465655 LCE3AQ5TA76 89 aa0.35□□□□□ -2.35
RPL39P28-201ENST00000465655 KRTAP1-3Q8IUG1 177 aa0.35□□□□□ -2.35
RPL39P28-201ENST00000465655 ANKHD1Q8IWZ3 2542 aaKnown RBP0.35□□□□□ -2.35
RPL39P28-201ENST00000465655 PDZD2O15018 2839 aa0.35□□□□□ -2.35
RPL39P28-201ENST00000465655 HIVEP3Q5T1R4 2406 aa0.34□□□□□ -2.35
RPL39P28-201ENST00000465655 USP9XQ93008 2570 aaPredicted RBP0.34□□□□□ -2.35
RPL39P28-201ENST00000465655 HRNRQ86YZ3 2850 aaPredicted RBP0.34□□□□□ -2.35
RPL39P28-201ENST00000465655 TGP01266 2768 aa0.34□□□□□ -2.36
RPL39P28-201ENST00000465655 KRTAP1-1Q07627 177 aa0.34□□□□□ -2.36
RPL39P28-201ENST00000465655 PTPN13Q12923 2485 aa0.34□□□□□ -2.36
RPL39P28-201ENST00000465655 DOPEY1Q5JWR5 2465 aa0.34□□□□□ -2.36
RPL39P28-201ENST00000465655 LCE1EQ5T753 118 aa0.34□□□□□ -2.36
RPL39P28-201ENST00000465655 LCE1FQ5T754 118 aa0.34□□□□□ -2.36
RPL39P28-201ENST00000465655 LCE5AQ5TCM9 118 aa0.34□□□□□ -2.36
RPL39P28-201ENST00000465655 NAV2Q8IVL1 2488 aa0.34□□□□□ -2.36
RPL39P28-201ENST00000465655 KRTAP2-2Q9BYT5 123 aa0.34□□□□□ -2.36
RPL39P28-201ENST00000465655 NIPBLQ6KC79 2804 aaeCLIP0.34□□□□□ -2.36
RPL39P28-201ENST00000465655 ZNF292O60281 2723 aa0.34□□□□□ -2.36
RPL39P28-201ENST00000465655 FBN2P35556 2912 aa0.34□□□□□ -2.36
RPL39P28-201ENST00000465655 UTP20O75691 2785 aaKnown RBP0.34□□□□□ -2.36
RPL39P28-201ENST00000465655 EPG5Q9HCE0 2579 aa0.33□□□□□ -2.36
RPL39P28-201ENST00000465655 HECTD1Q9ULT8 2610 aa0.33□□□□□ -2.36
RPL39P28-201ENST00000465655 SMR3BP02814 79 aaPredicted RBP0.33□□□□□ -2.36
RPL39P28-201ENST00000465655 KRTAP12-4P60329 112 aa0.33□□□□□ -2.36
RPL39P28-201ENST00000465655 LCE3CQ5T5A8 94 aa0.33□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms