RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 ZNF706Q9Y5V0 76 aaPredicted RBP4.39□□□□□ -1.71
USP48-206ENST00000464577 ANK2Q01484 3957 aa4.39□□□□□ -1.71
USP48-206ENST00000464577 F8P00451 2351 aa4.38□□□□□ -1.71
USP48-206ENST00000464577 IGHV6-1A0A0B4J1U7 121 aa4.38□□□□□ -1.71
USP48-206ENST00000464577 K7EIL1 84 aa4.38□□□□□ -1.71
USP48-206ENST00000464577 RBM12B-AS1Q9P1G2 102 aa4.38□□□□□ -1.71
USP48-206ENST00000464577 C7orf65Q6ZTY9 151 aa4.37□□□□□ -1.71
USP48-206ENST00000464577 APLNQ9ULZ1 77 aa4.37□□□□□ -1.71
USP48-206ENST00000464577 PANO1I0J062 215 aa4.36□□□□□ -1.71
USP48-206ENST00000464577 SPACA4Q8TDM5 124 aa4.36□□□□□ -1.71
USP48-206ENST00000464577 HUWE1Q7Z6Z7 4374 aaKnown RBP4.36□□□□□ -1.71
USP48-206ENST00000464577 BAHCC1Q9P281 2608 aa4.36□□□□□ -1.71
USP48-206ENST00000464577 SPINK7P58062 85 aa4.36□□□□□ -1.71
USP48-206ENST00000464577 WWC2-AS2Q96NR7 200 aa4.36□□□□□ -1.71
USP48-206ENST00000464577 CMYA5Q8N3K9 4069 aa4.35□□□□□ -1.71
USP48-206ENST00000464577 DNAH10Q8IVF4 4471 aa4.35□□□□□ -1.71
USP48-206ENST00000464577 KRTAP13-3Q3SY46 172 aa4.34□□□□□ -1.71
USP48-206ENST00000464577 MAST4O15021 2626 aa4.34□□□□□ -1.71
USP48-206ENST00000464577 FLNBO75369 2602 aaKnown RBP4.34□□□□□ -1.71
USP48-206ENST00000464577 Q6ZRN7 208 aaPredicted RBP4.34□□□□□ -1.71
USP48-206ENST00000464577 A0A087X002 238 aa4.33□□□□□ -1.72
USP48-206ENST00000464577 NBDYA0A0U1RRE5 68 aa4.33□□□□□ -1.72
USP48-206ENST00000464577 NOTCH2NLQ7Z3S9 236 aa4.33□□□□□ -1.72
USP48-206ENST00000464577 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.33□□□□□ -1.72
USP48-206ENST00000464577 TENM2Q9NT68 2774 aa4.33□□□□□ -1.72
USP48-206ENST00000464577 ACYP2P14621 99 aa4.32□□□□□ -1.72
USP48-206ENST00000464577 DNAH9Q9NYC9 4486 aa4.32□□□□□ -1.72
USP48-206ENST00000464577 HECTD1Q9ULT8 2610 aa4.32□□□□□ -1.72
USP48-206ENST00000464577 IGLV5-52A0A0A0MRZ9 124 aa4.31□□□□□ -1.72
USP48-206ENST00000464577 C8orf87E5RJ46 101 aa4.31□□□□□ -1.72
USP48-206ENST00000464577 Q5W150 140 aa4.31□□□□□ -1.72
USP48-206ENST00000464577 ZNF861PO60384 105 aa4.3□□□□□ -1.72
USP48-206ENST00000464577 PRR26Q8N8Z3 221 aa4.3□□□□□ -1.72
USP48-206ENST00000464577 SRRM2Q9UQ35 2752 aaKnown RBP4.3□□□□□ -1.72
USP48-206ENST00000464577 A0A0A0MQY5 61 aa4.3□□□□□ -1.72
USP48-206ENST00000464577 DMAC1Q96GE9 116 aa4.3□□□□□ -1.72
USP48-206ENST00000464577 PSORS1C2Q9UIG4 136 aa4.3□□□□□ -1.72
USP48-206ENST00000464577 DYNC2H1Q8NCM8 4307 aaKnown RBP4.29□□□□□ -1.72
USP48-206ENST00000464577 A0A087WTM6 91 aa4.26□□□□□ -1.73
USP48-206ENST00000464577 ANAPC11Q9NYG5 84 aa4.26□□□□□ -1.73
USP48-206ENST00000464577 NUPR2A6NF83 97 aa4.26□□□□□ -1.73
USP48-206ENST00000464577 SPINK6Q6UWN8 80 aa4.26□□□□□ -1.73
USP48-206ENST00000464577 STAB1Q9NY15 2570 aa4.25□□□□□ -1.73
USP48-206ENST00000464577 RTL8CO15255 209 aa4.25□□□□□ -1.73
USP48-206ENST00000464577 LYSTQ99698 3801 aa4.25□□□□□ -1.73
USP48-206ENST00000464577 ALMS1Q8TCU4 4167 aa4.24□□□□□ -1.73
USP48-206ENST00000464577 NOTCH1P46531 2555 aa4.24□□□□□ -1.73
USP48-206ENST00000464577 A0A1B0GU69 56 aa4.24□□□□□ -1.73
USP48-206ENST00000464577 IGKV2-30P06310 120 aa4.24□□□□□ -1.73
USP48-206ENST00000464577 LINC00313P59037 77 aa4.24□□□□□ -1.73
USP48-206ENST00000464577 SPATA8Q6RVD6 105 aa4.24□□□□□ -1.73
USP48-206ENST00000464577 SSBP3-AS1Q7Z2R9 100 aa4.24□□□□□ -1.73
USP48-206ENST00000464577 FBN1P35555 2871 aaKnown RBP4.24□□□□□ -1.73
USP48-206ENST00000464577 NBEAL1Q6ZS30 2694 aa4.23□□□□□ -1.73
USP48-206ENST00000464577 PLA2G1BP04054 148 aaKnown RBP4.23□□□□□ -1.73
USP48-206ENST00000464577 IGLV7-43P04211 117 aa4.23□□□□□ -1.73
USP48-206ENST00000464577 DNAH8Q96JB1 4490 aa4.23□□□□□ -1.73
USP48-206ENST00000464577 CIRBP-AS1Q8TBR5 109 aa4.22□□□□□ -1.73
USP48-206ENST00000464577 LCE5AQ5TCM9 118 aa4.2□□□□□ -1.74
USP48-206ENST00000464577 STAB2Q8WWQ8 2551 aa4.19□□□□□ -1.74
USP48-206ENST00000464577 UQCR11O14957 56 aa4.19□□□□□ -1.74
USP48-206ENST00000464577 MIR22HGQ0VDD5 57 aa4.19□□□□□ -1.74
USP48-206ENST00000464577 PRAC1Q96KF2 57 aa4.19□□□□□ -1.74
USP48-206ENST00000464577 DNAH17Q9UFH2 4485 aa4.19□□□□□ -1.74
USP48-206ENST00000464577 COL6A5A8TX70 2615 aa4.18□□□□□ -1.74
USP48-206ENST00000464577 VPS13DQ5THJ4 4388 aa4.18□□□□□ -1.74
USP48-206ENST00000464577 KRTAP16-1A8MUX0 517 aa4.18□□□□□ -1.74
USP48-206ENST00000464577 PLECQ15149 4684 aaKnown RBP4.18□□□□□ -1.74
USP48-206ENST00000464577 ADM2Q7Z4H4 148 aa4.16□□□□□ -1.74
USP48-206ENST00000464577 RETNLBQ9BQ08 111 aa4.15□□□□□ -1.74
USP48-206ENST00000464577 IGKV2D-30A0A075B6S6 120 aa4.15□□□□□ -1.75
USP48-206ENST00000464577 LINC01554Q52M75 96 aa4.15□□□□□ -1.75
USP48-206ENST00000464577 COL7A1Q02388 2944 aa4.14□□□□□ -1.75
USP48-206ENST00000464577 DNAH7Q8WXX0 4024 aa4.14□□□□□ -1.75
USP48-206ENST00000464577 LCE4AQ5TA78 99 aa4.14□□□□□ -1.75
USP48-206ENST00000464577 KRTAP13-2Q52LG2 175 aa4.13□□□□□ -1.75
USP48-206ENST00000464577 C1orf134Q5TEV5 83 aa4.11□□□□□ -1.75
USP48-206ENST00000464577 HECTD4Q9Y4D8 3996 aa4.11□□□□□ -1.75
USP48-206ENST00000464577 CSMD3Q7Z407 3707 aa4.11□□□□□ -1.75
USP48-206ENST00000464577 MGAM2Q2M2H8 2515 aa4.09□□□□□ -1.75
USP48-206ENST00000464577 DNAH2Q9P225 4427 aa4.08□□□□□ -1.76
USP48-206ENST00000464577 FRAS1Q86XX4 4008 aa4.07□□□□□ -1.76
USP48-206ENST00000464577 STARD9Q9P2P6 4700 aa4.06□□□□□ -1.76
USP48-206ENST00000464577 LY6G6CO95867 125 aa4.06□□□□□ -1.76
USP48-206ENST00000464577 KRTAP1-4P0C5Y4 121 aa4.06□□□□□ -1.76
USP48-206ENST00000464577 CSAG1Q6PB30 78 aa4.06□□□□□ -1.76
USP48-206ENST00000464577 PRKDCP78527 4128 aaKnown RBP4.06□□□□□ -1.76
USP48-206ENST00000464577 Q6ZSA8 131 aa4.06□□□□□ -1.76
USP48-206ENST00000464577 KRTAP19-4Q3LI73 84 aa4.05□□□□□ -1.76
USP48-206ENST00000464577 FBN3Q75N90 2809 aa4.04□□□□□ -1.76
USP48-206ENST00000464577 SPINK1P00995 79 aa4.03□□□□□ -1.76
USP48-206ENST00000464577 KRTAP10-2P60368 255 aa4.03□□□□□ -1.76
USP48-206ENST00000464577 Q8N1X5 172 aa4.02□□□□□ -1.77
USP48-206ENST00000464577 DNAH11Q96DT5 4516 aa4.02□□□□□ -1.77
USP48-206ENST00000464577 A8MUU9 505 aa4.01□□□□□ -1.77
USP48-206ENST00000464577 RPS29P62273 56 aaKnown RBP4.01□□□□□ -1.77
USP48-206ENST00000464577 H0YAA0 97 aa4.01□□□□□ -1.77
USP48-206ENST00000464577 TYMSOSQ8TAI1 123 aa4.01□□□□□ -1.77
USP48-206ENST00000464577 KRTAP10-1P60331 282 aa4□□□□□ -1.77
USP48-206ENST00000464577 MEGF8Q7Z7M0 2845 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 146.2 ms