RNA–Protein interactions for RNA: ENST00000464025.5

LMO2-204, Transcript of LIM domain only 2, humanhuman

TSL 1 (best)

Gene LMO2, Length 1,550 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO2-204ENST00000464025 KRTAP13-2Q52LG2 175 aa10.2□□□□□ -0.78
LMO2-204ENST00000464025 LINC00208Q96KT6 92 aa10.19□□□□□ -0.78
LMO2-204ENST00000464025 MRPL34Q9BQ48 92 aaKnown RBP10.18□□□□□ -0.78
LMO2-204ENST00000464025 VPS13BQ7Z7G8 4022 aa10.16□□□□□ -0.78
LMO2-204ENST00000464025 CYP4F30PQ9H0H9 118 aa10.16□□□□□ -0.78
LMO2-204ENST00000464025 SMIM26A0A096LP01 95 aa10.15□□□□□ -0.78
LMO2-204ENST00000464025 C8orf87E5RJ46 101 aa10.14□□□□□ -0.79
LMO2-204ENST00000464025 SPANXA2-OT1Q8N9U9 137 aa10.14□□□□□ -0.79
LMO2-204ENST00000464025 C1orf64Q8NEQ6 169 aa10.13□□□□□ -0.79
LMO2-204ENST00000464025 A0A1B0GVY2 172 aa10.12□□□□□ -0.79
LMO2-204ENST00000464025 LCE2DQ5TA82 110 aaPredicted RBP10.11□□□□□ -0.79
LMO2-204ENST00000464025 SPINK6Q6UWN8 80 aa10.11□□□□□ -0.79
LMO2-204ENST00000464025 NOTCH2NLQ7Z3S9 236 aa10.11□□□□□ -0.79
LMO2-204ENST00000464025 LIMD2Q9BT23 127 aa10.08□□□□□ -0.8
LMO2-204ENST00000464025 C1orf195Q5TG92 126 aa10.07□□□□□ -0.8
LMO2-204ENST00000464025 PLA2G1BP04054 148 aaKnown RBP10.06□□□□□ -0.8
LMO2-204ENST00000464025 NDUFS5O43920 106 aa10.05□□□□□ -0.8
LMO2-204ENST00000464025 PKHD1P08F94 4074 aa10.05□□□□□ -0.8
LMO2-204ENST00000464025 FP248Q71RG6 208 aaPredicted RBP10.05□□□□□ -0.8
LMO2-204ENST00000464025 DYNC1H1Q14204 4646 aaKnown RBP10.02□□□□□ -0.81
LMO2-204ENST00000464025 TYMSOSQ8TAI1 123 aa10.02□□□□□ -0.81
LMO2-204ENST00000464025 SPINK1P00995 79 aa10.01□□□□□ -0.81
LMO2-204ENST00000464025 LINC00313P59037 77 aa10.01□□□□□ -0.81
LMO2-204ENST00000464025 RPS29P62273 56 aaKnown RBP10□□□□□ -0.81
LMO2-204ENST00000464025 C4orf48Q5BLP8 95 aa10□□□□□ -0.81
LMO2-204ENST00000464025 IGLV7-46A0A075B6I9 117 aa9.99□□□□□ -0.81
LMO2-204ENST00000464025 C4orf26Q17RF5 130 aa9.99□□□□□ -0.81
LMO2-204ENST00000464025 KRTAP13-3Q3SY46 172 aa9.99□□□□□ -0.81
LMO2-204ENST00000464025 Q8N9P0 234 aaPredicted RBP9.98□□□□□ -0.81
LMO2-204ENST00000464025 LOC101927531A0A1B0GV80 90 aa9.96□□□□□ -0.82
LMO2-204ENST00000464025 SPAG11AQ6PDA7 123 aa9.96□□□□□ -0.82
LMO2-204ENST00000464025 KRTAP10-4P60372 401 aaPredicted RBP9.94□□□□□ -0.82
LMO2-204ENST00000464025 PRR4Q16378 134 aa9.94□□□□□ -0.82
LMO2-204ENST00000464025 APOBP04114 4563 aaKnown RBP9.94□□□□□ -0.82
LMO2-204ENST00000464025 Q5W150 140 aa9.92□□□□□ -0.82
LMO2-204ENST00000464025 KRTAP16-1A8MUX0 517 aa9.92□□□□□ -0.82
LMO2-204ENST00000464025 LINC00304Q8N9R0 145 aa9.9□□□□□ -0.82
LMO2-204ENST00000464025 RYR2Q92736 4967 aa9.9□□□□□ -0.83
LMO2-204ENST00000464025 FAM229AH3BQW9 127 aa9.89□□□□□ -0.83
LMO2-204ENST00000464025 SMR3BP02814 79 aaPredicted RBP9.89□□□□□ -0.83
LMO2-204ENST00000464025 PRR26Q8N8Z3 221 aa9.89□□□□□ -0.83
LMO2-204ENST00000464025 SVIPQ8NHG7 77 aa9.88□□□□□ -0.83
LMO2-204ENST00000464025 PCOTHQ58A44 107 aa9.88□□□□□ -0.83
LMO2-204ENST00000464025 PKHD1L1Q86WI1 4243 aa9.87□□□□□ -0.83
LMO2-204ENST00000464025 Q1T7F1 81 aa9.87□□□□□ -0.83
LMO2-204ENST00000464025 MPLKIPQ8TAP9 179 aa9.84□□□□□ -0.83
LMO2-204ENST00000464025 V9GYY9 64 aa9.8□□□□□ -0.84
LMO2-204ENST00000464025 FAT1Q14517 4588 aa9.8□□□□□ -0.84
LMO2-204ENST00000464025 COA5Q86WW8 74 aa9.79□□□□□ -0.84
LMO2-204ENST00000464025 IGKV2-30P06310 120 aa9.76□□□□□ -0.85
LMO2-204ENST00000464025 KMT2CQ8NEZ4 4911 aaKnown RBP9.73□□□□□ -0.85
LMO2-204ENST00000464025 HRES1P13985 223 aa9.7□□□□□ -0.86
LMO2-204ENST00000464025 DMAC1Q96GE9 116 aa9.67□□□□□ -0.86
LMO2-204ENST00000464025 RETNLBQ9BQ08 111 aa9.66□□□□□ -0.86
LMO2-204ENST00000464025 ACYP2P14621 99 aa9.65□□□□□ -0.86
LMO2-204ENST00000464025 C20orf166-AS1Q96NR2 134 aa9.62□□□□□ -0.87
LMO2-204ENST00000464025 A8MUU9 505 aa9.61□□□□□ -0.87
LMO2-204ENST00000464025 PRO0628Q9UI54 55 aa9.6□□□□□ -0.87
LMO2-204ENST00000464025 HSPG2P98160 4391 aa9.58□□□□□ -0.88
LMO2-204ENST00000464025 PSPHP1O15172 72 aa9.58□□□□□ -0.88
LMO2-204ENST00000464025 KRTAP10-8P60410 259 aa9.58□□□□□ -0.88
LMO2-204ENST00000464025 BRK1Q8WUW1 75 aa9.58□□□□□ -0.88
LMO2-204ENST00000464025 A8MUN3 132 aa9.57□□□□□ -0.88
LMO2-204ENST00000464025 LINC01558Q9Y6Z2 57 aa9.57□□□□□ -0.88
LMO2-204ENST00000464025 IGKV2D-30A0A075B6S6 120 aa9.56□□□□□ -0.88
LMO2-204ENST00000464025 Q5VSD8 79 aa9.55□□□□□ -0.88
LMO2-204ENST00000464025 Q5VV11 94 aa9.55□□□□□ -0.88
LMO2-204ENST00000464025 FLG2Q5D862 2391 aaPredicted RBP9.55□□□□□ -0.88
LMO2-204ENST00000464025 C7orf65Q6ZTY9 151 aa9.54□□□□□ -0.88
LMO2-204ENST00000464025 TNXBP22105 4242 aa9.54□□□□□ -0.88
LMO2-204ENST00000464025 PRR15LQ9BU68 103 aa9.53□□□□□ -0.88
LMO2-204ENST00000464025 Q8N1X5 172 aa9.51□□□□□ -0.89
LMO2-204ENST00000464025 C9orf92A6NGG3 77 aa9.5□□□□□ -0.89
LMO2-204ENST00000464025 CHKB-CPT1BH3BT56 60 aa9.5□□□□□ -0.89
LMO2-204ENST00000464025 Q75L30 129 aa9.5□□□□□ -0.89
LMO2-204ENST00000464025 KRTAP3-3Q9BYR6 98 aa9.46□□□□□ -0.9
LMO2-204ENST00000464025 KRTAP3-2Q9BYR7 98 aa9.46□□□□□ -0.9
LMO2-204ENST00000464025 RYR3Q15413 4870 aa9.45□□□□□ -0.9
LMO2-204ENST00000464025 RYR1P21817 5038 aa9.45□□□□□ -0.9
LMO2-204ENST00000464025 FAT3Q8TDW7 4589 aa9.44□□□□□ -0.9
LMO2-204ENST00000464025 LRP1Q07954 4544 aaKnown RBP9.39□□□□□ -0.91
LMO2-204ENST00000464025 KRTAP17-1Q9BYP8 105 aa9.37□□□□□ -0.91
LMO2-204ENST00000464025 A6NED7 52 aa9.33□□□□□ -0.92
LMO2-204ENST00000464025 SPINK7P58062 85 aa9.32□□□□□ -0.92
LMO2-204ENST00000464025 MT1HL1P0DM35 61 aa9.3□□□□□ -0.92
LMO2-204ENST00000464025 DMBT1Q9UGM3 2413 aaPredicted RBP9.26□□□□□ -0.93
LMO2-204ENST00000464025 RPL37P61927 97 aaKnown RBP9.25□□□□□ -0.93
LMO2-204ENST00000464025 LCA10Q71F78 164 aa9.24□□□□□ -0.93
LMO2-204ENST00000464025 CDC42SE1Q9NRR8 79 aa9.24□□□□□ -0.93
LMO2-204ENST00000464025 A0A1B0GU69 56 aa9.24□□□□□ -0.93
LMO2-204ENST00000464025 ATP11AUNQ6ZP68 121 aa9.24□□□□□ -0.93
LMO2-204ENST00000464025 SPTSSBQ8NFR3 76 aa9.24□□□□□ -0.93
LMO2-204ENST00000464025 KRTAP3-1Q9BYR8 98 aa9.23□□□□□ -0.93
LMO2-204ENST00000464025 XP32Q5T750 250 aa9.2□□□□□ -0.94
LMO2-204ENST00000464025 KIAA1109Q2LD37 5005 aa9.2□□□□□ -0.94
LMO2-204ENST00000464025 A8MU10 97 aa9.19□□□□□ -0.94
LMO2-204ENST00000464025 COX6B2Q6YFQ2 88 aa9.19□□□□□ -0.94
LMO2-204ENST00000464025 SEC61GP60059 68 aa9.09□□□□□ -0.95
LMO2-204ENST00000464025 EPPK1P58107 5090 aaKnown RBP9.08□□□□□ -0.96
LMO2-204ENST00000464025 MYCBP2O75592 4640 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms