RNA–Protein interactions for RNA: ENST00000462733.5

ATPAF2-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 1 (best)

Gene ATPAF2, Length 1,737 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-202ENST00000462733 LINC00483Q53H64 154 aa10.75□□□□□ -0.69
ATPAF2-202ENST00000462733 HRCT1Q6UXD1 115 aa10.75□□□□□ -0.69
ATPAF2-202ENST00000462733 PRR15Q8IV56 129 aa10.75□□□□□ -0.69
ATPAF2-202ENST00000462733 ZNF706Q9Y5V0 76 aaPredicted RBP10.75□□□□□ -0.69
ATPAF2-202ENST00000462733 FLG2Q5D862 2391 aaPredicted RBP10.73□□□□□ -0.69
ATPAF2-202ENST00000462733 DEFB116Q30KQ4 102 aa10.72□□□□□ -0.69
ATPAF2-202ENST00000462733 ANAPC11Q9NYG5 84 aa10.72□□□□□ -0.69
ATPAF2-202ENST00000462733 NDUFB1O75438 58 aa10.7□□□□□ -0.7
ATPAF2-202ENST00000462733 CASC2Q6XLA1 102 aa10.7□□□□□ -0.7
ATPAF2-202ENST00000462733 WFDC13Q8IUB5 93 aa10.7□□□□□ -0.7
ATPAF2-202ENST00000462733 H3BPC8 53 aa10.7□□□□□ -0.7
ATPAF2-202ENST00000462733 MP68P56378 58 aa10.7□□□□□ -0.7
ATPAF2-202ENST00000462733 ABCA13Q86UQ4 5058 aa10.68□□□□□ -0.7
ATPAF2-202ENST00000462733 KRTAP1-4P0C5Y4 121 aa10.68□□□□□ -0.7
ATPAF2-202ENST00000462733 FP248Q71RG6 208 aaPredicted RBP10.67□□□□□ -0.7
ATPAF2-202ENST00000462733 LRP1Q07954 4544 aaKnown RBP10.67□□□□□ -0.7
ATPAF2-202ENST00000462733 FAT3Q8TDW7 4589 aa10.65□□□□□ -0.71
ATPAF2-202ENST00000462733 PRO0628Q9UI54 55 aa10.64□□□□□ -0.71
ATPAF2-202ENST00000462733 MYCBP2O75592 4640 aa10.64□□□□□ -0.71
ATPAF2-202ENST00000462733 CYP4F30PQ9H0H9 118 aa10.63□□□□□ -0.71
ATPAF2-202ENST00000462733 A0A087X002 238 aa10.61□□□□□ -0.71
ATPAF2-202ENST00000462733 IGLV9-49A0A0B4J1Y8 123 aa10.61□□□□□ -0.71
ATPAF2-202ENST00000462733 hDV103S1A0JD37 113 aa10.61□□□□□ -0.71
ATPAF2-202ENST00000462733 MMP24-AS1A0A0U1RRL7 71 aa10.6□□□□□ -0.71
ATPAF2-202ENST00000462733 PRR26Q8N8Z3 221 aa10.6□□□□□ -0.71
ATPAF2-202ENST00000462733 TRAV22A0A0B4J277 110 aa10.59□□□□□ -0.71
ATPAF2-202ENST00000462733 FAM229BQ4G0N7 80 aa10.59□□□□□ -0.71
ATPAF2-202ENST00000462733 H0Y9P7 68 aa10.58□□□□□ -0.72
ATPAF2-202ENST00000462733 MOBPQ13875 183 aa10.58□□□□□ -0.72
ATPAF2-202ENST00000462733 Q96NJ1 140 aa10.58□□□□□ -0.72
ATPAF2-202ENST00000462733 ASB16-AS1Q495Z4 193 aa10.56□□□□□ -0.72
ATPAF2-202ENST00000462733 KRTAP13-2Q52LG2 175 aa10.55□□□□□ -0.72
ATPAF2-202ENST00000462733 SPANXA2-OT1Q8N9U9 137 aa10.55□□□□□ -0.72
ATPAF2-202ENST00000462733 LINC00208Q96KT6 92 aa10.55□□□□□ -0.72
ATPAF2-202ENST00000462733 TP53AIP1Q9HCN2 124 aa10.54□□□□□ -0.72
ATPAF2-202ENST00000462733 TNXBP22105 4242 aa10.53□□□□□ -0.72
ATPAF2-202ENST00000462733 C1orf64Q8NEQ6 169 aa10.52□□□□□ -0.73
ATPAF2-202ENST00000462733 TYMSOSQ8TAI1 123 aa10.52□□□□□ -0.73
ATPAF2-202ENST00000462733 C8orf17Q9NRJ1 99 aa10.5□□□□□ -0.73
ATPAF2-202ENST00000462733 A0A1B0GVX0 72 aa10.49□□□□□ -0.73
ATPAF2-202ENST00000462733 KRTAP10-8P60410 259 aa10.47□□□□□ -0.73
ATPAF2-202ENST00000462733 PCLOQ9Y6V0 5065 aa10.47□□□□□ -0.73
ATPAF2-202ENST00000462733 CD164Q04900 197 aa10.46□□□□□ -0.74
ATPAF2-202ENST00000462733 MT1HL1P0DM35 61 aa10.45□□□□□ -0.74
ATPAF2-202ENST00000462733 SSBP3-AS1Q7Z2R9 100 aa10.44□□□□□ -0.74
ATPAF2-202ENST00000462733 Q1T7F1 81 aa10.44□□□□□ -0.74
ATPAF2-202ENST00000462733 MPLKIPQ8TAP9 179 aa10.43□□□□□ -0.74
ATPAF2-202ENST00000462733 J3QL48 77 aa10.42□□□□□ -0.74
ATPAF2-202ENST00000462733 V9GYY9 64 aa10.41□□□□□ -0.74
ATPAF2-202ENST00000462733 DMBT1Q9UGM3 2413 aaPredicted RBP10.4□□□□□ -0.74
ATPAF2-202ENST00000462733 IGHV6-1A0A0B4J1U7 121 aa10.39□□□□□ -0.75
ATPAF2-202ENST00000462733 LINC00304Q8N9R0 145 aa10.39□□□□□ -0.75
ATPAF2-202ENST00000462733 PRR4Q16378 134 aa10.38□□□□□ -0.75
ATPAF2-202ENST00000462733 MRPL34Q9BQ48 92 aaKnown RBP10.38□□□□□ -0.75
ATPAF2-202ENST00000462733 C4orf48Q5BLP8 95 aa10.37□□□□□ -0.75
ATPAF2-202ENST00000462733 BRK1Q8WUW1 75 aa10.36□□□□□ -0.75
ATPAF2-202ENST00000462733 IGLV7-46A0A075B6I9 117 aa10.35□□□□□ -0.75
ATPAF2-202ENST00000462733 SPAG11AQ6PDA7 123 aa10.32□□□□□ -0.76
ATPAF2-202ENST00000462733 C8orf87E5RJ46 101 aa10.31□□□□□ -0.76
ATPAF2-202ENST00000462733 NDUFS5O43920 106 aa10.3□□□□□ -0.76
ATPAF2-202ENST00000462733 C1orf195Q5TG92 126 aa10.3□□□□□ -0.76
ATPAF2-202ENST00000462733 SPINK1P00995 79 aa10.29□□□□□ -0.76
ATPAF2-202ENST00000462733 LOC101927531A0A1B0GV80 90 aa10.25□□□□□ -0.77
ATPAF2-202ENST00000462733 NOTCH2NLQ7Z3S9 236 aa10.24□□□□□ -0.77
ATPAF2-202ENST00000462733 PCOTHQ58A44 107 aa10.22□□□□□ -0.77
ATPAF2-202ENST00000462733 COA5Q86WW8 74 aa10.22□□□□□ -0.77
ATPAF2-202ENST00000462733 LIMD2Q9BT23 127 aa10.22□□□□□ -0.77
ATPAF2-202ENST00000462733 RPS29P62273 56 aaKnown RBP10.2□□□□□ -0.78
ATPAF2-202ENST00000462733 KRTAP13-3Q3SY46 172 aa10.19□□□□□ -0.78
ATPAF2-202ENST00000462733 Q8N9P0 234 aaPredicted RBP10.18□□□□□ -0.78
ATPAF2-202ENST00000462733 RETNLBQ9BQ08 111 aa10.17□□□□□ -0.78
ATPAF2-202ENST00000462733 HERC1Q15751 4861 aa10.16□□□□□ -0.78
ATPAF2-202ENST00000462733 PSPHP1O15172 72 aa10.15□□□□□ -0.78
ATPAF2-202ENST00000462733 LINC00313P59037 77 aa10.13□□□□□ -0.79
ATPAF2-202ENST00000462733 A8MUN3 132 aa10.12□□□□□ -0.79
ATPAF2-202ENST00000462733 Q5W150 140 aa10.11□□□□□ -0.79
ATPAF2-202ENST00000462733 Q5VV11 94 aa10.1□□□□□ -0.79
ATPAF2-202ENST00000462733 HRES1P13985 223 aa10.06□□□□□ -0.8
ATPAF2-202ENST00000462733 Q75L30 129 aa10.04□□□□□ -0.8
ATPAF2-202ENST00000462733 PRR15LQ9BU68 103 aa10.04□□□□□ -0.8
ATPAF2-202ENST00000462733 LINC01558Q9Y6Z2 57 aa10.03□□□□□ -0.8
ATPAF2-202ENST00000462733 KRTAP16-1A8MUX0 517 aa10.02□□□□□ -0.81
ATPAF2-202ENST00000462733 CHKB-CPT1BH3BT56 60 aa9.99□□□□□ -0.81
ATPAF2-202ENST00000462733 IGKV2-30P06310 120 aa9.98□□□□□ -0.81
ATPAF2-202ENST00000462733 ACYP2P14621 99 aa9.98□□□□□ -0.81
ATPAF2-202ENST00000462733 DMAC1Q96GE9 116 aa9.96□□□□□ -0.81
ATPAF2-202ENST00000462733 PMAIP1Q13794 54 aa9.96□□□□□ -0.82
ATPAF2-202ENST00000462733 HMCN2Q8NDA2 5059 aa9.93□□□□□ -0.82
ATPAF2-202ENST00000462733 LPAP08519 4548 aa9.92□□□□□ -0.82
ATPAF2-202ENST00000462733 C9orf92A6NGG3 77 aa9.88□□□□□ -0.83
ATPAF2-202ENST00000462733 ATP11AUNQ6ZP68 121 aa9.88□□□□□ -0.83
ATPAF2-202ENST00000462733 A6NED7 52 aa9.87□□□□□ -0.83
ATPAF2-202ENST00000462733 TPRXLQ17RH7 258 aa9.85□□□□□ -0.83
ATPAF2-202ENST00000462733 CDC42SE1Q9NRR8 79 aa9.85□□□□□ -0.83
ATPAF2-202ENST00000462733 LRP2P98164 4655 aa9.81□□□□□ -0.84
ATPAF2-202ENST00000462733 LCA10Q71F78 164 aa9.79□□□□□ -0.84
ATPAF2-202ENST00000462733 SEC61GP60059 68 aa9.77□□□□□ -0.85
ATPAF2-202ENST00000462733 IGKV2D-30A0A075B6S6 120 aa9.76□□□□□ -0.85
ATPAF2-202ENST00000462733 A8MU10 97 aa9.74□□□□□ -0.85
ATPAF2-202ENST00000462733 XP32Q5T750 250 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms