RNA–Protein interactions for RNA: ENST00000457828.6

LSS-205, Transcript of lanosterol synthase, humanhuman

TSL 1 (best) BASIC

Gene LSS, Length 4,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-205ENST00000457828 CD164Q04900 197 aa9.9□□□□□ -0.82
LSS-205ENST00000457828 KTN1-AS1Q86SY8 53 aa9.9□□□□□ -0.82
LSS-205ENST00000457828 KRTAP11-1Q8IUC1 163 aa9.89□□□□□ -0.83
LSS-205ENST00000457828 SPRR1BP22528 89 aa9.89□□□□□ -0.83
LSS-205ENST00000457828 PANO1I0J062 215 aa9.87□□□□□ -0.83
LSS-205ENST00000457828 Q96NJ1 140 aa9.87□□□□□ -0.83
LSS-205ENST00000457828 C7orf65Q6ZTY9 151 aa9.86□□□□□ -0.83
LSS-205ENST00000457828 CDC42SE1Q9NRR8 79 aa9.86□□□□□ -0.83
LSS-205ENST00000457828 A8MU10 97 aa9.84□□□□□ -0.83
LSS-205ENST00000457828 Q6ZRN7 208 aaPredicted RBP9.84□□□□□ -0.83
LSS-205ENST00000457828 Q75L30 129 aa9.84□□□□□ -0.83
LSS-205ENST00000457828 Q5VSD8 79 aa9.82□□□□□ -0.84
LSS-205ENST00000457828 C9orf92A6NGG3 77 aa9.81□□□□□ -0.84
LSS-205ENST00000457828 HRES1P13985 223 aa9.8□□□□□ -0.84
LSS-205ENST00000457828 C8orf87E5RJ46 101 aa9.79□□□□□ -0.84
LSS-205ENST00000457828 COX6B2Q6YFQ2 88 aa9.78□□□□□ -0.84
LSS-205ENST00000457828 LINC01558Q9Y6Z2 57 aa9.76□□□□□ -0.85
LSS-205ENST00000457828 SPINK7P58062 85 aa9.76□□□□□ -0.85
LSS-205ENST00000457828 RBM12B-AS1Q9P1G2 102 aa9.72□□□□□ -0.85
LSS-205ENST00000457828 LCA10Q71F78 164 aa9.72□□□□□ -0.85
LSS-205ENST00000457828 UQCR11O14957 56 aa9.71□□□□□ -0.85
LSS-205ENST00000457828 A0A087X002 238 aa9.7□□□□□ -0.86
LSS-205ENST00000457828 NOTCH2NLQ7Z3S9 236 aa9.7□□□□□ -0.86
LSS-205ENST00000457828 MIR22HGQ0VDD5 57 aa9.69□□□□□ -0.86
LSS-205ENST00000457828 TRRAPQ9Y4A5 3859 aa9.67□□□□□ -0.86
LSS-205ENST00000457828 K7ERS5 55 aa9.66□□□□□ -0.86
LSS-205ENST00000457828 ZNF469Q96JG9 3925 aaPredicted RBP9.65□□□□□ -0.87
LSS-205ENST00000457828 ANK3Q12955 4377 aaKnown RBP9.64□□□□□ -0.87
LSS-205ENST00000457828 PRAC1Q96KF2 57 aa9.62□□□□□ -0.87
LSS-205ENST00000457828 SRRM2Q9UQ35 2752 aaKnown RBP9.61□□□□□ -0.87
LSS-205ENST00000457828 Q8N1X5 172 aa9.6□□□□□ -0.87
LSS-205ENST00000457828 Q5W150 140 aa9.6□□□□□ -0.87
LSS-205ENST00000457828 LINC00483Q53H64 154 aa9.57□□□□□ -0.88
LSS-205ENST00000457828 KRTAP13-1Q8IUC0 172 aa9.53□□□□□ -0.88
LSS-205ENST00000457828 FBN3Q75N90 2809 aa9.53□□□□□ -0.88
LSS-205ENST00000457828 A6NN06 94 aa9.46□□□□□ -0.9
LSS-205ENST00000457828 DMAC1Q96GE9 116 aa9.45□□□□□ -0.9
LSS-205ENST00000457828 Q6ZSA8 131 aa9.43□□□□□ -0.9
LSS-205ENST00000457828 AKAP9Q99996 3911 aa9.39□□□□□ -0.91
LSS-205ENST00000457828 M0R2T5 61 aa9.35□□□□□ -0.91
LSS-205ENST00000457828 LINC01554Q52M75 96 aa9.34□□□□□ -0.91
LSS-205ENST00000457828 ADM2Q7Z4H4 148 aa9.32□□□□□ -0.92
LSS-205ENST00000457828 ASB16-AS1Q495Z4 193 aa9.31□□□□□ -0.92
LSS-205ENST00000457828 CSAG1Q6PB30 78 aa9.3□□□□□ -0.92
LSS-205ENST00000457828 COL7A1Q02388 2944 aa9.27□□□□□ -0.92
LSS-205ENST00000457828 KRTAP13-2Q52LG2 175 aa9.25□□□□□ -0.93
LSS-205ENST00000457828 A0A1B0GU33 70 aa9.24□□□□□ -0.93
LSS-205ENST00000457828 SPATA8Q6RVD6 105 aa9.23□□□□□ -0.93
LSS-205ENST00000457828 SEC61BP60468 96 aaKnown RBP9.2□□□□□ -0.94
LSS-205ENST00000457828 CSMD3Q7Z407 3707 aa9.19□□□□□ -0.94
LSS-205ENST00000457828 A0A0D9SG42 100 aa9.17□□□□□ -0.94
LSS-205ENST00000457828 CRIPTQ9P021 101 aa9.15□□□□□ -0.94
LSS-205ENST00000457828 MEGF8Q7Z7M0 2845 aa9.12□□□□□ -0.95
LSS-205ENST00000457828 SPINT4Q6UDR6 99 aa9.1□□□□□ -0.95
LSS-205ENST00000457828 A0A1B0GVY2 172 aa9.08□□□□□ -0.96
LSS-205ENST00000457828 H3BS24 57 aa9.05□□□□□ -0.96
LSS-205ENST00000457828 KRTAP1-4P0C5Y4 121 aa9.04□□□□□ -0.96
LSS-205ENST00000457828 RPS29P62273 56 aaKnown RBP9.03□□□□□ -0.96
LSS-205ENST00000457828 KRTAP13-3Q3SY46 172 aa9.01□□□□□ -0.97
LSS-205ENST00000457828 H1FX-AS1Q4G0G2 97 aa8.97□□□□□ -0.97
LSS-205ENST00000457828 DNHD1Q96M86 4753 aa8.94□□□□□ -0.98
LSS-205ENST00000457828 KRTAP16-1A8MUX0 517 aa8.92□□□□□ -0.98
LSS-205ENST00000457828 S4R3F8 94 aa8.82□□□□□ -1
LSS-205ENST00000457828 RPL37P61927 97 aaKnown RBP8.82□□□□□ -1
LSS-205ENST00000457828 KRTAP25-1Q3LHN0 102 aa8.81□□□□□ -1
LSS-205ENST00000457828 H0YAA0 97 aa8.78□□□□□ -1
LSS-205ENST00000457828 HUWE1Q7Z6Z7 4374 aaKnown RBP8.78□□□□□ -1
LSS-205ENST00000457828 ROMO1P60602 79 aa8.77□□□□□ -1.01
LSS-205ENST00000457828 DNAH10Q8IVF4 4471 aa8.71□□□□□ -1.01
LSS-205ENST00000457828 A8MUU9 505 aa8.71□□□□□ -1.01
LSS-205ENST00000457828 KRTAP10-8P60410 259 aa8.7□□□□□ -1.02
LSS-205ENST00000457828 C20orf166-AS1Q96NR2 134 aa8.69□□□□□ -1.02
LSS-205ENST00000457828 CAMK2N1Q7Z7J9 78 aa8.68□□□□□ -1.02
LSS-205ENST00000457828 XP32Q5T750 250 aa8.66□□□□□ -1.02
LSS-205ENST00000457828 DNAH9Q9NYC9 4486 aa8.63□□□□□ -1.03
LSS-205ENST00000457828 R4GN34 69 aa8.63□□□□□ -1.03
LSS-205ENST00000457828 TPRXLQ17RH7 258 aa8.6□□□□□ -1.03
LSS-205ENST00000457828 ANK2Q01484 3957 aa8.52□□□□□ -1.05
LSS-205ENST00000457828 C10orf95Q9H7T3 257 aa8.47□□□□□ -1.05
LSS-205ENST00000457828 KRTAP3-1Q9BYR8 98 aa8.46□□□□□ -1.05
LSS-205ENST00000457828 PLECQ15149 4684 aaKnown RBP8.46□□□□□ -1.06
LSS-205ENST00000457828 M0QZ58 72 aa8.45□□□□□ -1.06
LSS-205ENST00000457828 KRTAP4-5Q9BYR2 181 aa8.43□□□□□ -1.06
LSS-205ENST00000457828 PRKDCP78527 4128 aaKnown RBP8.38□□□□□ -1.07
LSS-205ENST00000457828 NDUFAF8A1L188 74 aa8.36□□□□□ -1.07
LSS-205ENST00000457828 P0C880 135 aa8.35□□□□□ -1.07
LSS-205ENST00000457828 LYSTQ99698 3801 aa8.34□□□□□ -1.07
LSS-205ENST00000457828 DNAH1Q9P2D7 4330 aa8.34□□□□□ -1.07
LSS-205ENST00000457828 MT1HL1P0DM35 61 aa8.32□□□□□ -1.08
LSS-205ENST00000457828 KRTAP10-4P60372 401 aaPredicted RBP8.29□□□□□ -1.08
LSS-205ENST00000457828 PLAC4Q8WY50 150 aa8.29□□□□□ -1.08
LSS-205ENST00000457828 DNAH5Q8TE73 4624 aa8.27□□□□□ -1.09
LSS-205ENST00000457828 DNAH11Q96DT5 4516 aa8.25□□□□□ -1.09
LSS-205ENST00000457828 LUZP6Q538Z0 58 aa8.23□□□□□ -1.09
LSS-205ENST00000457828 STARD9Q9P2P6 4700 aa8.22□□□□□ -1.09
LSS-205ENST00000457828 DNAH8Q96JB1 4490 aa8.22□□□□□ -1.09
LSS-205ENST00000457828 ALMS1Q8TCU4 4167 aa8.2□□□□□ -1.1
LSS-205ENST00000457828 KRTAP13-4Q3LI77 160 aa8.18□□□□□ -1.1
LSS-205ENST00000457828 FRAS1Q86XX4 4008 aa8.14□□□□□ -1.11
LSS-205ENST00000457828 KRTAP10-6P60371 365 aaPredicted RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms