RNA–Protein interactions for RNA: ENST00000457823.6

SMARCAD1-204, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCAD1, Length 4,649 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-204ENST00000457823 PANO1I0J062 215 aa7.04□□□□□ -1.28
SMARCAD1-204ENST00000457823 FP248Q71RG6 208 aaPredicted RBP7.03□□□□□ -1.28
SMARCAD1-204ENST00000457823 SPINK7P58062 85 aa7.03□□□□□ -1.28
SMARCAD1-204ENST00000457823 LINC01558Q9Y6Z2 57 aa7.02□□□□□ -1.29
SMARCAD1-204ENST00000457823 Q75L30 129 aa7.01□□□□□ -1.29
SMARCAD1-204ENST00000457823 KRTAP4-16G5E9R7 235 aaPredicted RBP7.01□□□□□ -1.29
SMARCAD1-204ENST00000457823 Q5XG85 94 aa6.99□□□□□ -1.29
SMARCAD1-204ENST00000457823 CAMK2N1Q7Z7J9 78 aa6.99□□□□□ -1.29
SMARCAD1-204ENST00000457823 MXRA5Q9NR99 2828 aa6.99□□□□□ -1.29
SMARCAD1-204ENST00000457823 CSAG1Q6PB30 78 aa6.98□□□□□ -1.29
SMARCAD1-204ENST00000457823 FBN2P35556 2912 aa6.96□□□□□ -1.29
SMARCAD1-204ENST00000457823 M0R2T5 61 aa6.96□□□□□ -1.3
SMARCAD1-204ENST00000457823 TENM3Q9P273 2699 aa6.96□□□□□ -1.3
SMARCAD1-204ENST00000457823 LCE6AA0A183 80 aa6.96□□□□□ -1.3
SMARCAD1-204ENST00000457823 Q6ZR54 194 aa6.94□□□□□ -1.3
SMARCAD1-204ENST00000457823 Q5VSD8 79 aa6.94□□□□□ -1.3
SMARCAD1-204ENST00000457823 LINC00483Q53H64 154 aa6.93□□□□□ -1.3
SMARCAD1-204ENST00000457823 NF1P21359 2839 aa6.93□□□□□ -1.3
SMARCAD1-204ENST00000457823 Q5VV11 94 aa6.93□□□□□ -1.3
SMARCAD1-204ENST00000457823 S4R3F8 94 aa6.91□□□□□ -1.3
SMARCAD1-204ENST00000457823 A0A087X002 238 aa6.9□□□□□ -1.3
SMARCAD1-204ENST00000457823 ZNF469Q96JG9 3925 aaPredicted RBP6.9□□□□□ -1.31
SMARCAD1-204ENST00000457823 DMAC1Q96GE9 116 aa6.9□□□□□ -1.31
SMARCAD1-204ENST00000457823 OXTP01178 125 aa6.89□□□□□ -1.31
SMARCAD1-204ENST00000457823 KRTAP29-1A8MX34 341 aaPredicted RBP6.88□□□□□ -1.31
SMARCAD1-204ENST00000457823 PRAC1Q96KF2 57 aa6.87□□□□□ -1.31
SMARCAD1-204ENST00000457823 KRTAP11-1Q8IUC1 163 aa6.87□□□□□ -1.31
SMARCAD1-204ENST00000457823 NBPF19A0A087WUL8 3843 aa6.87□□□□□ -1.31
SMARCAD1-204ENST00000457823 R4GN34 69 aa6.86□□□□□ -1.31
SMARCAD1-204ENST00000457823 LUZP6Q538Z0 58 aa6.85□□□□□ -1.31
SMARCAD1-204ENST00000457823 SEC61BP60468 96 aaKnown RBP6.85□□□□□ -1.31
SMARCAD1-204ENST00000457823 NOTCH2NLQ7Z3S9 236 aa6.85□□□□□ -1.31
SMARCAD1-204ENST00000457823 KRTAP7-1Q8IUC3 87 aa6.82□□□□□ -1.32
SMARCAD1-204ENST00000457823 AKAP9Q99996 3911 aa6.82□□□□□ -1.32
SMARCAD1-204ENST00000457823 Q6ZRN7 208 aaPredicted RBP6.82□□□□□ -1.32
SMARCAD1-204ENST00000457823 TENM1Q9UKZ4 2725 aa6.77□□□□□ -1.33
SMARCAD1-204ENST00000457823 RPL37P61927 97 aaKnown RBP6.76□□□□□ -1.33
SMARCAD1-204ENST00000457823 M0QZ58 72 aa6.72□□□□□ -1.33
SMARCAD1-204ENST00000457823 H1FX-AS1Q4G0G2 97 aa6.71□□□□□ -1.33
SMARCAD1-204ENST00000457823 SPATA8Q6RVD6 105 aa6.7□□□□□ -1.34
SMARCAD1-204ENST00000457823 PKD1L1Q8TDX9 2849 aa6.7□□□□□ -1.34
SMARCAD1-204ENST00000457823 ASB16-AS1Q495Z4 193 aa6.69□□□□□ -1.34
SMARCAD1-204ENST00000457823 KRTAP13-2Q52LG2 175 aa6.68□□□□□ -1.34
SMARCAD1-204ENST00000457823 KRTAP13-1Q8IUC0 172 aa6.67□□□□□ -1.34
SMARCAD1-204ENST00000457823 ADM2Q7Z4H4 148 aa6.65□□□□□ -1.34
SMARCAD1-204ENST00000457823 ROMO1P60602 79 aa6.65□□□□□ -1.34
SMARCAD1-204ENST00000457823 VWFP04275 2813 aa6.62□□□□□ -1.35
SMARCAD1-204ENST00000457823 RPS29P62273 56 aaKnown RBP6.61□□□□□ -1.35
SMARCAD1-204ENST00000457823 TENM2Q9NT68 2774 aa6.61□□□□□ -1.35
SMARCAD1-204ENST00000457823 PDZD2O15018 2839 aa6.59□□□□□ -1.35
SMARCAD1-204ENST00000457823 OTOGQ6ZRI0 2925 aa6.54□□□□□ -1.36
SMARCAD1-204ENST00000457823 ANK3Q12955 4377 aaKnown RBP6.53□□□□□ -1.36
SMARCAD1-204ENST00000457823 A8MU10 97 aa6.53□□□□□ -1.36
SMARCAD1-204ENST00000457823 PLAC4Q8WY50 150 aa6.5□□□□□ -1.37
SMARCAD1-204ENST00000457823 TRRAPQ9Y4A5 3859 aa6.49□□□□□ -1.37
SMARCAD1-204ENST00000457823 SRRM2Q9UQ35 2752 aaKnown RBP6.48□□□□□ -1.37
SMARCAD1-204ENST00000457823 A8MUU9 505 aa6.47□□□□□ -1.37
SMARCAD1-204ENST00000457823 H3BS24 57 aa6.47□□□□□ -1.37
SMARCAD1-204ENST00000457823 TGP01266 2768 aa6.46□□□□□ -1.37
SMARCAD1-204ENST00000457823 A0A0A0MQY5 61 aa6.45□□□□□ -1.38
SMARCAD1-204ENST00000457823 KRTAP21-3Q3LHN1 58 aa6.44□□□□□ -1.38
SMARCAD1-204ENST00000457823 A6NN06 94 aa6.42□□□□□ -1.38
SMARCAD1-204ENST00000457823 C20orf166-AS1Q96NR2 134 aa6.41□□□□□ -1.38
SMARCAD1-204ENST00000457823 FBN1P35555 2871 aaKnown RBP6.41□□□□□ -1.38
SMARCAD1-204ENST00000457823 KRTAP1-4P0C5Y4 121 aa6.38□□□□□ -1.39
SMARCAD1-204ENST00000457823 KRTAP25-1Q3LHN0 102 aa6.35□□□□□ -1.39
SMARCAD1-204ENST00000457823 XP32Q5T750 250 aa6.26□□□□□ -1.41
SMARCAD1-204ENST00000457823 ANK2Q01484 3957 aa6.24□□□□□ -1.41
SMARCAD1-204ENST00000457823 TNP1P09430 55 aa6.19□□□□□ -1.42
SMARCAD1-204ENST00000457823 KRTAP16-1A8MUX0 517 aa6.16□□□□□ -1.42
SMARCAD1-204ENST00000457823 NDUFAF8A1L188 74 aa6.15□□□□□ -1.42
SMARCAD1-204ENST00000457823 A0A1B0GVY2 172 aa6.12□□□□□ -1.43
SMARCAD1-204ENST00000457823 TPRXLQ17RH7 258 aa6.11□□□□□ -1.43
SMARCAD1-204ENST00000457823 H0YAA0 97 aa6.1□□□□□ -1.43
SMARCAD1-204ENST00000457823 FBN3Q75N90 2809 aa6.1□□□□□ -1.43
SMARCAD1-204ENST00000457823 C10orf95Q9H7T3 257 aa6.09□□□□□ -1.43
SMARCAD1-204ENST00000457823 KRTAP10-8P60410 259 aa6.08□□□□□ -1.44
SMARCAD1-204ENST00000457823 CMYA5Q8N3K9 4069 aa6.07□□□□□ -1.44
SMARCAD1-204ENST00000457823 CSMD3Q7Z407 3707 aa6.07□□□□□ -1.44
SMARCAD1-204ENST00000457823 KRTAP13-3Q3SY46 172 aa6.06□□□□□ -1.44
SMARCAD1-204ENST00000457823 LYSTQ99698 3801 aa6.04□□□□□ -1.44
SMARCAD1-204ENST00000457823 COL7A1Q02388 2944 aa6.03□□□□□ -1.44
SMARCAD1-204ENST00000457823 P0C880 135 aa6.03□□□□□ -1.44
SMARCAD1-204ENST00000457823 PP632Q6XCG6 107 aa5.98□□□□□ -1.45
SMARCAD1-204ENST00000457823 KRTAP10-10P60014 251 aa5.97□□□□□ -1.45
SMARCAD1-204ENST00000457823 DNAH10Q8IVF4 4471 aa5.96□□□□□ -1.45
SMARCAD1-204ENST00000457823 MEGF8Q7Z7M0 2845 aa5.96□□□□□ -1.46
SMARCAD1-204ENST00000457823 HUWE1Q7Z6Z7 4374 aaKnown RBP5.92□□□□□ -1.46
SMARCAD1-204ENST00000457823 DNAH3Q8TD57 4116 aa5.91□□□□□ -1.46
SMARCAD1-204ENST00000457823 DNAH9Q9NYC9 4486 aa5.87□□□□□ -1.47
SMARCAD1-204ENST00000457823 DNAH7Q8WXX0 4024 aa5.87□□□□□ -1.47
SMARCAD1-204ENST00000457823 DNAH1Q9P2D7 4330 aa5.84□□□□□ -1.47
SMARCAD1-204ENST00000457823 PRO2289Q9P1D8 64 aa5.78□□□□□ -1.48
SMARCAD1-204ENST00000457823 PLECQ15149 4684 aaKnown RBP5.77□□□□□ -1.49
SMARCAD1-204ENST00000457823 KRTAP3-1Q9BYR8 98 aa5.74□□□□□ -1.49
SMARCAD1-204ENST00000457823 KRTAP12-2P59991 146 aa5.74□□□□□ -1.49
SMARCAD1-204ENST00000457823 PRKDCP78527 4128 aaKnown RBP5.7□□□□□ -1.5
SMARCAD1-204ENST00000457823 STARD9Q9P2P6 4700 aa5.69□□□□□ -1.5
SMARCAD1-204ENST00000457823 KMT2AQ03164 3969 aa5.66□□□□□ -1.5
SMARCAD1-204ENST00000457823 KRTAP12-1P59990 96 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms