RNA–Protein interactions for RNA: ENST00000456150.5

CSPG5-203, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 1 (best) BASIC

Gene CSPG5, Length 2,089 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-203ENST00000456150 NDUFS5O43920 106 aa11.86□□□□□ -0.51
CSPG5-203ENST00000456150 CIRBP-AS1Q8TBR5 109 aa11.85□□□□□ -0.51
CSPG5-203ENST00000456150 SSBP3-AS1Q7Z2R9 100 aa11.84□□□□□ -0.51
CSPG5-203ENST00000456150 FAT2Q9NYQ8 4349 aa11.84□□□□□ -0.51
CSPG5-203ENST00000456150 KRTAP10-2P60368 255 aa11.83□□□□□ -0.51
CSPG5-203ENST00000456150 DNAH11Q96DT5 4516 aa11.83□□□□□ -0.52
CSPG5-203ENST00000456150 IGLV7-46A0A075B6I9 117 aa11.8□□□□□ -0.52
CSPG5-203ENST00000456150 SPINK6Q6UWN8 80 aa11.79□□□□□ -0.52
CSPG5-203ENST00000456150 V9GYY9 64 aa11.79□□□□□ -0.52
CSPG5-203ENST00000456150 A0A087X002 238 aa11.78□□□□□ -0.52
CSPG5-203ENST00000456150 NOTCH2NLQ7Z3S9 236 aa11.78□□□□□ -0.52
CSPG5-203ENST00000456150 BRK1Q8WUW1 75 aa11.78□□□□□ -0.52
CSPG5-203ENST00000456150 DNAH5Q8TE73 4624 aa11.76□□□□□ -0.53
CSPG5-203ENST00000456150 PKD1P98161 4303 aa11.76□□□□□ -0.53
CSPG5-203ENST00000456150 PCOTHQ58A44 107 aa11.75□□□□□ -0.53
CSPG5-203ENST00000456150 Q6ZSA8 131 aa11.75□□□□□ -0.53
CSPG5-203ENST00000456150 KMT2CQ8NEZ4 4911 aaKnown RBP11.74□□□□□ -0.53
CSPG5-203ENST00000456150 C8orf87E5RJ46 101 aa11.72□□□□□ -0.53
CSPG5-203ENST00000456150 RYR2Q92736 4967 aa11.7□□□□□ -0.54
CSPG5-203ENST00000456150 KRTAP10-1P60331 282 aa11.69□□□□□ -0.54
CSPG5-203ENST00000456150 C1orf195Q5TG92 126 aa11.69□□□□□ -0.54
CSPG5-203ENST00000456150 COA5Q86WW8 74 aa11.69□□□□□ -0.54
CSPG5-203ENST00000456150 LOC101927531A0A1B0GV80 90 aa11.67□□□□□ -0.54
CSPG5-203ENST00000456150 PSPHP1O15172 72 aa11.67□□□□□ -0.54
CSPG5-203ENST00000456150 KRTAP13-2Q52LG2 175 aa11.64□□□□□ -0.55
CSPG5-203ENST00000456150 LIMD2Q9BT23 127 aa11.64□□□□□ -0.55
CSPG5-203ENST00000456150 Q8N9P0 234 aaPredicted RBP11.64□□□□□ -0.55
CSPG5-203ENST00000456150 KRTAP13-3Q3SY46 172 aa11.61□□□□□ -0.55
CSPG5-203ENST00000456150 A8MUN3 132 aa11.61□□□□□ -0.55
CSPG5-203ENST00000456150 LINC00313P59037 77 aa11.59□□□□□ -0.55
CSPG5-203ENST00000456150 Q5W150 140 aa11.59□□□□□ -0.55
CSPG5-203ENST00000456150 A0A1B0GVY2 172 aa11.56□□□□□ -0.56
CSPG5-203ENST00000456150 PKHD1P08F94 4074 aa11.55□□□□□ -0.56
CSPG5-203ENST00000456150 KRTAP1-4P0C5Y4 121 aa11.55□□□□□ -0.56
CSPG5-203ENST00000456150 Q5VV11 94 aa11.55□□□□□ -0.56
CSPG5-203ENST00000456150 FAM229AH3BQW9 127 aa11.51□□□□□ -0.57
CSPG5-203ENST00000456150 PRR15LQ9BU68 103 aa11.51□□□□□ -0.57
CSPG5-203ENST00000456150 HRES1P13985 223 aa11.51□□□□□ -0.57
CSPG5-203ENST00000456150 RYR3Q15413 4870 aa11.5□□□□□ -0.57
CSPG5-203ENST00000456150 LRP1BQ9NZR2 4599 aa11.49□□□□□ -0.57
CSPG5-203ENST00000456150 C4orf48Q5BLP8 95 aa11.46□□□□□ -0.57
CSPG5-203ENST00000456150 DYNC1H1Q14204 4646 aaKnown RBP11.45□□□□□ -0.58
CSPG5-203ENST00000456150 CHKB-CPT1BH3BT56 60 aa11.45□□□□□ -0.58
CSPG5-203ENST00000456150 PLA2G1BP04054 148 aaKnown RBP11.45□□□□□ -0.58
CSPG5-203ENST00000456150 Q75L30 129 aa11.44□□□□□ -0.58
CSPG5-203ENST00000456150 TYMSOSQ8TAI1 123 aa11.43□□□□□ -0.58
CSPG5-203ENST00000456150 LINC01558Q9Y6Z2 57 aa11.43□□□□□ -0.58
CSPG5-203ENST00000456150 KRTAP16-1A8MUX0 517 aa11.42□□□□□ -0.58
CSPG5-203ENST00000456150 SPAG11AQ6PDA7 123 aa11.41□□□□□ -0.58
CSPG5-203ENST00000456150 SPINK1P00995 79 aa11.4□□□□□ -0.58
CSPG5-203ENST00000456150 ACYP2P14621 99 aa11.4□□□□□ -0.58
CSPG5-203ENST00000456150 IGKV2-30P06310 120 aa11.39□□□□□ -0.59
CSPG5-203ENST00000456150 VPS13BQ7Z7G8 4022 aa11.38□□□□□ -0.59
CSPG5-203ENST00000456150 RETNLBQ9BQ08 111 aa11.37□□□□□ -0.59
CSPG5-203ENST00000456150 DMAC1Q96GE9 116 aa11.36□□□□□ -0.59
CSPG5-203ENST00000456150 APOBP04114 4563 aaKnown RBP11.31□□□□□ -0.6
CSPG5-203ENST00000456150 A6NED7 52 aa11.31□□□□□ -0.6
CSPG5-203ENST00000456150 RPS29P62273 56 aaKnown RBP11.3□□□□□ -0.6
CSPG5-203ENST00000456150 SMR3BP02814 79 aaPredicted RBP11.29□□□□□ -0.6
CSPG5-203ENST00000456150 PRR26Q8N8Z3 221 aa11.29□□□□□ -0.6
CSPG5-203ENST00000456150 LINC00304Q8N9R0 145 aa11.28□□□□□ -0.6
CSPG5-203ENST00000456150 A8MU10 97 aa11.24□□□□□ -0.61
CSPG5-203ENST00000456150 IGKV2D-30A0A075B6S6 120 aa11.22□□□□□ -0.61
CSPG5-203ENST00000456150 PMAIP1Q13794 54 aa11.22□□□□□ -0.61
CSPG5-203ENST00000456150 LCA10Q71F78 164 aa11.21□□□□□ -0.62
CSPG5-203ENST00000456150 CDC42SE1Q9NRR8 79 aa11.2□□□□□ -0.62
CSPG5-203ENST00000456150 FAT1Q14517 4588 aa11.19□□□□□ -0.62
CSPG5-203ENST00000456150 ATP11AUNQ6ZP68 121 aa11.16□□□□□ -0.62
CSPG5-203ENST00000456150 KRTAP10-4P60372 401 aaPredicted RBP11.13□□□□□ -0.63
CSPG5-203ENST00000456150 SPINK7P58062 85 aa11.12□□□□□ -0.63
CSPG5-203ENST00000456150 SEC61GP60059 68 aa11.11□□□□□ -0.63
CSPG5-203ENST00000456150 SPTSSBQ8NFR3 76 aa11.11□□□□□ -0.63
CSPG5-203ENST00000456150 C7orf65Q6ZTY9 151 aa11.1□□□□□ -0.63
CSPG5-203ENST00000456150 EPPK1P58107 5090 aaKnown RBP11.1□□□□□ -0.63
CSPG5-203ENST00000456150 HSPG2P98160 4391 aa11.06□□□□□ -0.64
CSPG5-203ENST00000456150 A0A1B0GU69 56 aa11.04□□□□□ -0.64
CSPG5-203ENST00000456150 KRTAP17-1Q9BYP8 105 aa11.02□□□□□ -0.65
CSPG5-203ENST00000456150 RYR1P21817 5038 aa10.99□□□□□ -0.65
CSPG5-203ENST00000456150 A8MUU9 505 aa10.98□□□□□ -0.65
CSPG5-203ENST00000456150 C20orf166-AS1Q96NR2 134 aa10.98□□□□□ -0.65
CSPG5-203ENST00000456150 PKHD1L1Q86WI1 4243 aa10.98□□□□□ -0.65
CSPG5-203ENST00000456150 KIAA1109Q2LD37 5005 aa10.98□□□□□ -0.65
CSPG5-203ENST00000456150 C9orf92A6NGG3 77 aa10.96□□□□□ -0.65
CSPG5-203ENST00000456150 Q5VSD8 79 aa10.96□□□□□ -0.66
CSPG5-203ENST00000456150 A6NN06 94 aa10.94□□□□□ -0.66
CSPG5-203ENST00000456150 Q8N1X5 172 aa10.91□□□□□ -0.66
CSPG5-203ENST00000456150 KTN1-AS1Q86SY8 53 aa10.91□□□□□ -0.66
CSPG5-203ENST00000456150 UQCR11O14957 56 aa10.84□□□□□ -0.67
CSPG5-203ENST00000456150 SPATA8Q6RVD6 105 aa10.83□□□□□ -0.68
CSPG5-203ENST00000456150 MIR22HGQ0VDD5 57 aa10.78□□□□□ -0.68
CSPG5-203ENST00000456150 LRP1Q07954 4544 aaKnown RBP10.77□□□□□ -0.69
CSPG5-203ENST00000456150 FLG2Q5D862 2391 aaPredicted RBP10.72□□□□□ -0.69
CSPG5-203ENST00000456150 KRTAP4-5Q9BYR2 181 aa10.69□□□□□ -0.7
CSPG5-203ENST00000456150 KRTAP3-1Q9BYR8 98 aa10.69□□□□□ -0.7
CSPG5-203ENST00000456150 RBM12B-AS1Q9P1G2 102 aa10.68□□□□□ -0.7
CSPG5-203ENST00000456150 KRTAP10-8P60410 259 aa10.66□□□□□ -0.7
CSPG5-203ENST00000456150 FAT3Q8TDW7 4589 aa10.65□□□□□ -0.7
CSPG5-203ENST00000456150 TNXBP22105 4242 aa10.64□□□□□ -0.71
CSPG5-203ENST00000456150 MYCBP2O75592 4640 aa10.62□□□□□ -0.71
CSPG5-203ENST00000456150 COX6B2Q6YFQ2 88 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms