RNA–Protein interactions for RNA: ENST00000454258.2

AC006539.3-201, humanhuman

BASIC

Gene AC006539.3, Length 129 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006539.3-201ENST00000454258 SPACA4Q8TDM5 124 aa2.06□□□□□ -2.08
AC006539.3-201ENST00000454258 PRAC1Q96KF2 57 aa2.06□□□□□ -2.08
AC006539.3-201ENST00000454258 IGKV2D-30A0A075B6S6 120 aa2.05□□□□□ -2.08
AC006539.3-201ENST00000454258 A0A1W2PNN7 141 aa2.05□□□□□ -2.08
AC006539.3-201ENST00000454258 NUPR2A6NF83 97 aa2.05□□□□□ -2.08
AC006539.3-201ENST00000454258 Q5W150 140 aa2.05□□□□□ -2.08
AC006539.3-201ENST00000454258 ACANP16112 2415 aa2.05□□□□□ -2.08
AC006539.3-201ENST00000454258 STAB1Q9NY15 2570 aa2.04□□□□□ -2.08
AC006539.3-201ENST00000454258 ATRQ13535 2644 aa2.04□□□□□ -2.08
AC006539.3-201ENST00000454258 ANK3Q12955 4377 aaKnown RBP2.04□□□□□ -2.08
AC006539.3-201ENST00000454258 CHTF8P0CG12 524 aa2.04□□□□□ -2.08
AC006539.3-201ENST00000454258 KRTAP25-1Q3LHN0 102 aa2.04□□□□□ -2.08
AC006539.3-201ENST00000454258 CSAG1Q6PB30 78 aa2.04□□□□□ -2.08
AC006539.3-201ENST00000454258 COL6A5A8TX70 2615 aa2.04□□□□□ -2.08
AC006539.3-201ENST00000454258 ZANQ9Y493 2812 aa2.03□□□□□ -2.08
AC006539.3-201ENST00000454258 KRTAP10-2P60368 255 aa2.03□□□□□ -2.08
AC006539.3-201ENST00000454258 ROMO1P60602 79 aa2.03□□□□□ -2.08
AC006539.3-201ENST00000454258 COX6B2Q6YFQ2 88 aa2.03□□□□□ -2.08
AC006539.3-201ENST00000454258 ZNF469Q96JG9 3925 aaPredicted RBP2.02□□□□□ -2.09
AC006539.3-201ENST00000454258 A0A0G2JQZ4 141 aa2.02□□□□□ -2.09
AC006539.3-201ENST00000454258 NBDYA0A0U1RRE5 68 aa2.02□□□□□ -2.09
AC006539.3-201ENST00000454258 A8MUU9 505 aa2.02□□□□□ -2.09
AC006539.3-201ENST00000454258 RPS29P62273 56 aaKnown RBP2.02□□□□□ -2.09
AC006539.3-201ENST00000454258 C1orf134Q5TEV5 83 aa2.02□□□□□ -2.09
AC006539.3-201ENST00000454258 VPS13CQ709C8 3753 aa2.02□□□□□ -2.09
AC006539.3-201ENST00000454258 CASC10Q5T4H9 136 aa2.01□□□□□ -2.09
AC006539.3-201ENST00000454258 SPINK6Q6UWN8 80 aa2.01□□□□□ -2.09
AC006539.3-201ENST00000454258 NBEAL2Q6ZNJ1 2754 aa2□□□□□ -2.09
AC006539.3-201ENST00000454258 SVEP1Q4LDE5 3571 aa2□□□□□ -2.09
AC006539.3-201ENST00000454258 FBN1P35555 2871 aaKnown RBP2□□□□□ -2.09
AC006539.3-201ENST00000454258 KRTAP10-11P60412 298 aa2□□□□□ -2.09
AC006539.3-201ENST00000454258 ANK2Q01484 3957 aa2□□□□□ -2.09
AC006539.3-201ENST00000454258 A0A1B0GU33 70 aa1.99□□□□□ -2.09
AC006539.3-201ENST00000454258 SPINK1P00995 79 aa1.99□□□□□ -2.09
AC006539.3-201ENST00000454258 KRTAP15-1Q3LI76 137 aa1.99□□□□□ -2.09
AC006539.3-201ENST00000454258 CIRBP-AS1Q8TBR5 109 aa1.99□□□□□ -2.09
AC006539.3-201ENST00000454258 PSORS1C2Q9UIG4 136 aa1.99□□□□□ -2.09
AC006539.3-201ENST00000454258 H1FX-AS1Q4G0G2 97 aa1.98□□□□□ -2.09
AC006539.3-201ENST00000454258 ADM2Q7Z4H4 148 aa1.98□□□□□ -2.09
AC006539.3-201ENST00000454258 APLNQ9ULZ1 77 aa1.98□□□□□ -2.09
AC006539.3-201ENST00000454258 NBEAL1Q6ZS30 2694 aa1.97□□□□□ -2.09
AC006539.3-201ENST00000454258 PANO1I0J062 215 aa1.97□□□□□ -2.09
AC006539.3-201ENST00000454258 KRTAP19-1Q8IUB9 90 aa1.97□□□□□ -2.09
AC006539.3-201ENST00000454258 KRTAP11-1Q8IUC1 163 aa1.97□□□□□ -2.09
AC006539.3-201ENST00000454258 KRTAP1-5Q9BYS1 174 aa1.97□□□□□ -2.09
AC006539.3-201ENST00000454258 A0A087WTM6 91 aa1.96□□□□□ -2.1
AC006539.3-201ENST00000454258 KRTAP16-1A8MUX0 517 aa1.96□□□□□ -2.1
AC006539.3-201ENST00000454258 Q6ZRN7 208 aaPredicted RBP1.96□□□□□ -2.1
AC006539.3-201ENST00000454258 MGAM2Q2M2H8 2515 aa1.96□□□□□ -2.1
AC006539.3-201ENST00000454258 LOC100996750A0A140TA64 210 aa1.95□□□□□ -2.1
AC006539.3-201ENST00000454258 KRTAP9-6A0A140TA67 174 aa1.95□□□□□ -2.1
AC006539.3-201ENST00000454258 KRTAP9-7A8MTY7 169 aa1.95□□□□□ -2.1
AC006539.3-201ENST00000454258 H0YAA0 97 aa1.95□□□□□ -2.1
AC006539.3-201ENST00000454258 K7EIL1 84 aa1.95□□□□□ -2.1
AC006539.3-201ENST00000454258 LINC00304Q8N9R0 145 aa1.95□□□□□ -2.1
AC006539.3-201ENST00000454258 KRTAP4-6Q9BYQ5 205 aa1.95□□□□□ -2.1
AC006539.3-201ENST00000454258 CUBNO60494 3623 aa1.95□□□□□ -2.1
AC006539.3-201ENST00000454258 MEGF8Q7Z7M0 2845 aa1.94□□□□□ -2.1
AC006539.3-201ENST00000454258 RPL37P61927 97 aaKnown RBP1.94□□□□□ -2.1
AC006539.3-201ENST00000454258 SPINT4Q6UDR6 99 aa1.94□□□□□ -2.1
AC006539.3-201ENST00000454258 LCE4AQ5TA78 99 aa1.93□□□□□ -2.1
AC006539.3-201ENST00000454258 Q6ZSA8 131 aa1.93□□□□□ -2.1
AC006539.3-201ENST00000454258 CRIPTQ9P021 101 aa1.93□□□□□ -2.1
AC006539.3-201ENST00000454258 VWFP04275 2813 aa1.93□□□□□ -2.1
AC006539.3-201ENST00000454258 TENM2Q9NT68 2774 aa1.92□□□□□ -2.1
AC006539.3-201ENST00000454258 KRTAP4-12Q9BQ66 201 aa1.92□□□□□ -2.1
AC006539.3-201ENST00000454258 C20orf166-AS1Q96NR2 134 aa1.91□□□□□ -2.1
AC006539.3-201ENST00000454258 KRTAP9-4Q9BYQ2 154 aa1.91□□□□□ -2.1
AC006539.3-201ENST00000454258 TYMSOSQ8TAI1 123 aa1.9□□□□□ -2.11
AC006539.3-201ENST00000454258 TENM1Q9UKZ4 2725 aa1.9□□□□□ -2.11
AC006539.3-201ENST00000454258 TENM3Q9P273 2699 aa1.9□□□□□ -2.11
AC006539.3-201ENST00000454258 KRTAP4-8Q9BYQ9 185 aa1.89□□□□□ -2.11
AC006539.3-201ENST00000454258 ALMS1Q8TCU4 4167 aa1.89□□□□□ -2.11
AC006539.3-201ENST00000454258 STAB2Q8WWQ8 2551 aa1.88□□□□□ -2.11
AC006539.3-201ENST00000454258 KRTAP9-9Q9BYP9 154 aa1.88□□□□□ -2.11
AC006539.3-201ENST00000454258 TRRAPQ9Y4A5 3859 aa1.87□□□□□ -2.11
AC006539.3-201ENST00000454258 KRTAP13-2Q52LG2 175 aa1.87□□□□□ -2.11
AC006539.3-201ENST00000454258 NOTCH1P46531 2555 aa1.87□□□□□ -2.11
AC006539.3-201ENST00000454258 PKD1L1Q8TDX9 2849 aa1.86□□□□□ -2.11
AC006539.3-201ENST00000454258 DNAH9Q9NYC9 4486 aa1.86□□□□□ -2.11
AC006539.3-201ENST00000454258 DNAH1Q9P2D7 4330 aa1.86□□□□□ -2.11
AC006539.3-201ENST00000454258 M0QZ58 72 aa1.85□□□□□ -2.11
AC006539.3-201ENST00000454258 KRTAP1-4P0C5Y4 121 aa1.85□□□□□ -2.11
AC006539.3-201ENST00000454258 KRTAP9-3Q9BYQ3 159 aa1.85□□□□□ -2.11
AC006539.3-201ENST00000454258 KRTAP9-2Q9BYQ4 174 aa1.85□□□□□ -2.11
AC006539.3-201ENST00000454258 NDUFAF8A1L188 74 aa1.84□□□□□ -2.11
AC006539.3-201ENST00000454258 P0C880 135 aa1.84□□□□□ -2.11
AC006539.3-201ENST00000454258 PRKDCP78527 4128 aaKnown RBP1.84□□□□□ -2.12
AC006539.3-201ENST00000454258 KMT2CQ8NEZ4 4911 aaKnown RBP1.84□□□□□ -2.12
AC006539.3-201ENST00000454258 TGP01266 2768 aa1.84□□□□□ -2.12
AC006539.3-201ENST00000454258 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.83□□□□□ -2.12
AC006539.3-201ENST00000454258 LUZP6Q538Z0 58 aa1.83□□□□□ -2.12
AC006539.3-201ENST00000454258 PP632Q6XCG6 107 aa1.83□□□□□ -2.12
AC006539.3-201ENST00000454258 S4R3F8 94 aa1.83□□□□□ -2.12
AC006539.3-201ENST00000454258 RYR3Q15413 4870 aa1.83□□□□□ -2.12
AC006539.3-201ENST00000454258 LCE3BQ5TA77 95 aa1.82□□□□□ -2.12
AC006539.3-201ENST00000454258 SACSQ9NZJ4 4579 aa1.82□□□□□ -2.12
AC006539.3-201ENST00000454258 HUWE1Q7Z6Z7 4374 aaKnown RBP1.82□□□□□ -2.12
AC006539.3-201ENST00000454258 PLECQ15149 4684 aaKnown RBP1.81□□□□□ -2.12
AC006539.3-201ENST00000454258 SRRM2Q9UQ35 2752 aaKnown RBP1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms