RNA–Protein interactions for RNA: ENST00000453996.6

CTU2-202, Transcript of cytosolic thiouridylase subunit 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTU2, Length 1,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTU2-202ENST00000453996 Q8N1X5 172 aa12.23□□□□□ -0.45
CTU2-202ENST00000453996 IGHV6-1A0A0B4J1U7 121 aa12.23□□□□□ -0.45
CTU2-202ENST00000453996 CASC2Q6XLA1 102 aa12.23□□□□□ -0.45
CTU2-202ENST00000453996 KRTAP17-1Q9BYP8 105 aa12.23□□□□□ -0.45
CTU2-202ENST00000453996 MMP24-AS1A0A0U1RRL7 71 aa12.22□□□□□ -0.45
CTU2-202ENST00000453996 KRTAP29-1A8MX34 341 aaPredicted RBP12.2□□□□□ -0.46
CTU2-202ENST00000453996 OCR1Q9BZK8 76 aa12.19□□□□□ -0.46
CTU2-202ENST00000453996 C8orf17Q9NRJ1 99 aa12.19□□□□□ -0.46
CTU2-202ENST00000453996 hDV103S1A0JD37 113 aa12.16□□□□□ -0.46
CTU2-202ENST00000453996 C8orf87E5RJ46 101 aa12.1□□□□□ -0.47
CTU2-202ENST00000453996 NOTCH2NLQ7Z3S9 236 aa12.1□□□□□ -0.47
CTU2-202ENST00000453996 KRTAP10-8P60410 259 aa12.09□□□□□ -0.47
CTU2-202ENST00000453996 LRP1Q07954 4544 aaKnown RBP12.08□□□□□ -0.48
CTU2-202ENST00000453996 TMEM254Q8TBM7 123 aa12.07□□□□□ -0.48
CTU2-202ENST00000453996 TNXBP22105 4242 aa12.05□□□□□ -0.48
CTU2-202ENST00000453996 C20orf197Q8N268 126 aa12.05□□□□□ -0.48
CTU2-202ENST00000453996 MRPL34Q9BQ48 92 aaKnown RBP12.05□□□□□ -0.48
CTU2-202ENST00000453996 FAT3Q8TDW7 4589 aa12.05□□□□□ -0.48
CTU2-202ENST00000453996 LINC00313P59037 77 aa12.03□□□□□ -0.48
CTU2-202ENST00000453996 FLG2Q5D862 2391 aaPredicted RBP11.98□□□□□ -0.49
CTU2-202ENST00000453996 NDUFS5O43920 106 aa11.97□□□□□ -0.49
CTU2-202ENST00000453996 C5orf47Q569G3 176 aa11.97□□□□□ -0.49
CTU2-202ENST00000453996 KLKP1Q107X0 134 aa11.97□□□□□ -0.49
CTU2-202ENST00000453996 TP53AIP1Q9HCN2 124 aa11.97□□□□□ -0.49
CTU2-202ENST00000453996 CYSTM1Q9H1C7 97 aa11.96□□□□□ -0.49
CTU2-202ENST00000453996 SNURFQ9Y675 71 aa11.95□□□□□ -0.5
CTU2-202ENST00000453996 A0A0U1RQV1 116 aa11.93□□□□□ -0.5
CTU2-202ENST00000453996 MYCBP2O75592 4640 aa11.92□□□□□ -0.5
CTU2-202ENST00000453996 RETNLBQ9BQ08 111 aa11.92□□□□□ -0.5
CTU2-202ENST00000453996 MT1HL1P0DM35 61 aa11.91□□□□□ -0.5
CTU2-202ENST00000453996 KRTAP16-1A8MUX0 517 aa11.9□□□□□ -0.5
CTU2-202ENST00000453996 MP68P56378 58 aa11.9□□□□□ -0.5
CTU2-202ENST00000453996 H0Y9P7 68 aa11.9□□□□□ -0.51
CTU2-202ENST00000453996 TRAV22A0A0B4J277 110 aa11.89□□□□□ -0.51
CTU2-202ENST00000453996 KRTAP4-5Q9BYR2 181 aa11.89□□□□□ -0.51
CTU2-202ENST00000453996 OXTP01178 125 aa11.87□□□□□ -0.51
CTU2-202ENST00000453996 Q8N9P0 234 aaPredicted RBP11.87□□□□□ -0.51
CTU2-202ENST00000453996 BIRC6Q9NR09 4857 aa11.85□□□□□ -0.51
CTU2-202ENST00000453996 H3BPC8 53 aa11.83□□□□□ -0.52
CTU2-202ENST00000453996 NDUFC1O43677 76 aa11.83□□□□□ -0.52
CTU2-202ENST00000453996 ZCCHC13Q8WW36 166 aaKnown RBP11.82□□□□□ -0.52
CTU2-202ENST00000453996 LINC00208Q96KT6 92 aa11.82□□□□□ -0.52
CTU2-202ENST00000453996 H7BZZ5 65 aa11.82□□□□□ -0.52
CTU2-202ENST00000453996 TMEM258P61165 79 aa11.79□□□□□ -0.52
CTU2-202ENST00000453996 C9orf92A6NGG3 77 aa11.77□□□□□ -0.52
CTU2-202ENST00000453996 FP248Q71RG6 208 aaPredicted RBP11.77□□□□□ -0.52
CTU2-202ENST00000453996 DMBT1Q9UGM3 2413 aaPredicted RBP11.77□□□□□ -0.53
CTU2-202ENST00000453996 C1orf64Q8NEQ6 169 aa11.77□□□□□ -0.53
CTU2-202ENST00000453996 Q5W150 140 aa11.74□□□□□ -0.53
CTU2-202ENST00000453996 HERC2O95714 4834 aa11.74□□□□□ -0.53
CTU2-202ENST00000453996 KRTAP13-3Q3SY46 172 aa11.73□□□□□ -0.53
CTU2-202ENST00000453996 ABCA13Q86UQ4 5058 aa11.69□□□□□ -0.54
CTU2-202ENST00000453996 C20orf166-AS1Q96NR2 134 aa11.66□□□□□ -0.54
CTU2-202ENST00000453996 IGLV7-46A0A075B6I9 117 aa11.65□□□□□ -0.54
CTU2-202ENST00000453996 FAM236DA0A1B0GTK5 79 aa11.65□□□□□ -0.54
CTU2-202ENST00000453996 LOC101927531A0A1B0GV80 90 aa11.65□□□□□ -0.54
CTU2-202ENST00000453996 FAM236CP0DP71 79 aa11.65□□□□□ -0.54
CTU2-202ENST00000453996 A8MUU9 505 aa11.64□□□□□ -0.55
CTU2-202ENST00000453996 RPS28P62857 69 aaKnown RBP11.63□□□□□ -0.55
CTU2-202ENST00000453996 ATP5EP56381 51 aaPredicted RBP11.6□□□□□ -0.55
CTU2-202ENST00000453996 PRR4Q16378 134 aa11.57□□□□□ -0.56
CTU2-202ENST00000453996 J3QL48 77 aa11.56□□□□□ -0.56
CTU2-202ENST00000453996 PCOTHQ58A44 107 aa11.56□□□□□ -0.56
CTU2-202ENST00000453996 Q75L30 129 aa11.55□□□□□ -0.56
CTU2-202ENST00000453996 CYP4F30PQ9H0H9 118 aa11.55□□□□□ -0.56
CTU2-202ENST00000453996 IGKV2-30P06310 120 aa11.54□□□□□ -0.56
CTU2-202ENST00000453996 SPANXA2-OT1Q8N9U9 137 aa11.51□□□□□ -0.57
CTU2-202ENST00000453996 IGKV2D-30A0A075B6S6 120 aa11.48□□□□□ -0.57
CTU2-202ENST00000453996 XP32Q5T750 250 aa11.47□□□□□ -0.57
CTU2-202ENST00000453996 TPRXLQ17RH7 258 aa11.44□□□□□ -0.58
CTU2-202ENST00000453996 RPL37P61927 97 aaKnown RBP11.43□□□□□ -0.58
CTU2-202ENST00000453996 C7orf65Q6ZTY9 151 aa11.42□□□□□ -0.58
CTU2-202ENST00000453996 SERP1Q9Y6X1 66 aa11.41□□□□□ -0.58
CTU2-202ENST00000453996 ATP11AUNQ6ZP68 121 aa11.39□□□□□ -0.59
CTU2-202ENST00000453996 HRES1P13985 223 aa11.38□□□□□ -0.59
CTU2-202ENST00000453996 SVIPQ8NHG7 77 aa11.31□□□□□ -0.6
CTU2-202ENST00000453996 SPINK7P58062 85 aa11.28□□□□□ -0.6
CTU2-202ENST00000453996 PCLOQ9Y6V0 5065 aa11.24□□□□□ -0.61
CTU2-202ENST00000453996 DMAC1Q96GE9 116 aa11.22□□□□□ -0.61
CTU2-202ENST00000453996 LPAP08519 4548 aa11.22□□□□□ -0.61
CTU2-202ENST00000453996 COA5Q86WW8 74 aa11.18□□□□□ -0.62
CTU2-202ENST00000453996 LRP2P98164 4655 aa11.17□□□□□ -0.62
CTU2-202ENST00000453996 ACYP2P14621 99 aa11.16□□□□□ -0.62
CTU2-202ENST00000453996 C4orf26Q17RF5 130 aa11.16□□□□□ -0.62
CTU2-202ENST00000453996 SMIM26A0A096LP01 95 aa11.15□□□□□ -0.62
CTU2-202ENST00000453996 A8MUN3 132 aa11.08□□□□□ -0.64
CTU2-202ENST00000453996 SEC61BP60468 96 aaKnown RBP11.04□□□□□ -0.64
CTU2-202ENST00000453996 COX6B2Q6YFQ2 88 aa11.01□□□□□ -0.65
CTU2-202ENST00000453996 HERC1Q15751 4861 aa11.01□□□□□ -0.65
CTU2-202ENST00000453996 CHKB-CPT1BH3BT56 60 aa11□□□□□ -0.65
CTU2-202ENST00000453996 KRTAP3-1Q9BYR8 98 aa10.99□□□□□ -0.65
CTU2-202ENST00000453996 MPLKIPQ8TAP9 179 aa10.94□□□□□ -0.66
CTU2-202ENST00000453996 HMCN2Q8NDA2 5059 aa10.91□□□□□ -0.66
CTU2-202ENST00000453996 Q1T7F1 81 aa10.89□□□□□ -0.67
CTU2-202ENST00000453996 MUC17Q685J3 4493 aa10.87□□□□□ -0.67
CTU2-202ENST00000453996 V9GYY9 64 aa10.85□□□□□ -0.67
CTU2-202ENST00000453996 RBM12B-AS1Q9P1G2 102 aa10.82□□□□□ -0.68
CTU2-202ENST00000453996 KRTAP4-1Q9BYQ7 146 aa10.77□□□□□ -0.68
CTU2-202ENST00000453996 SPTSSBQ8NFR3 76 aa10.77□□□□□ -0.69
CTU2-202ENST00000453996 LINC01558Q9Y6Z2 57 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms