RNA–Protein interactions for RNA: ENST00000452489.6

PTPA-223, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-223ENST00000452489 FLNBO75369 2602 aaKnown RBP10.91□□□□□ -0.66
PTPA-223ENST00000452489 KRTAP10-11P60412 298 aa10.9□□□□□ -0.67
PTPA-223ENST00000452489 KRTAP1-5Q9BYS1 174 aa10.89□□□□□ -0.67
PTPA-223ENST00000452489 ANAPC11Q9NYG5 84 aa10.89□□□□□ -0.67
PTPA-223ENST00000452489 J3QKU1 62 aa10.88□□□□□ -0.67
PTPA-223ENST00000452489 PANO1I0J062 215 aa10.86□□□□□ -0.67
PTPA-223ENST00000452489 KRTAP25-1Q3LHN0 102 aa10.86□□□□□ -0.67
PTPA-223ENST00000452489 NBEAL1Q6ZS30 2694 aa10.84□□□□□ -0.67
PTPA-223ENST00000452489 WWC2-AS2Q96NR7 200 aa10.84□□□□□ -0.67
PTPA-223ENST00000452489 IGLV7-43P04211 117 aa10.83□□□□□ -0.68
PTPA-223ENST00000452489 LINC00483Q53H64 154 aa10.82□□□□□ -0.68
PTPA-223ENST00000452489 DNAH9Q9NYC9 4486 aa10.79□□□□□ -0.68
PTPA-223ENST00000452489 IGKV2-30P06310 120 aa10.78□□□□□ -0.68
PTPA-223ENST00000452489 MAST4O15021 2626 aa10.76□□□□□ -0.69
PTPA-223ENST00000452489 A8MUU9 505 aa10.76□□□□□ -0.69
PTPA-223ENST00000452489 IGLV5-52A0A0A0MRZ9 124 aa10.75□□□□□ -0.69
PTPA-223ENST00000452489 FAM229AH3BQW9 127 aa10.73□□□□□ -0.69
PTPA-223ENST00000452489 LINC00304Q8N9R0 145 aa10.73□□□□□ -0.69
PTPA-223ENST00000452489 NOTCH1P46531 2555 aa10.71□□□□□ -0.69
PTPA-223ENST00000452489 P0C880 135 aa10.71□□□□□ -0.69
PTPA-223ENST00000452489 SPINK1P00995 79 aa10.7□□□□□ -0.7
PTPA-223ENST00000452489 FRAS1Q86XX4 4008 aa10.69□□□□□ -0.7
PTPA-223ENST00000452489 NSD1Q96L73 2696 aaPredicted RBP10.69□□□□□ -0.7
PTPA-223ENST00000452489 H0YAA0 97 aa10.67□□□□□ -0.7
PTPA-223ENST00000452489 INAFM1C9JVW0 142 aa10.67□□□□□ -0.7
PTPA-223ENST00000452489 CRIPTQ9P021 101 aa10.67□□□□□ -0.7
PTPA-223ENST00000452489 IGKV2D-30A0A075B6S6 120 aa10.66□□□□□ -0.7
PTPA-223ENST00000452489 COL6A5A8TX70 2615 aa10.65□□□□□ -0.7
PTPA-223ENST00000452489 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.65□□□□□ -0.7
PTPA-223ENST00000452489 C14orf177Q52M58 125 aa10.64□□□□□ -0.71
PTPA-223ENST00000452489 CIRBP-AS1Q8TBR5 109 aa10.63□□□□□ -0.71
PTPA-223ENST00000452489 Q6ZSA8 131 aa10.62□□□□□ -0.71
PTPA-223ENST00000452489 FLG2Q5D862 2391 aaPredicted RBP10.62□□□□□ -0.71
PTPA-223ENST00000452489 MEGF8Q7Z7M0 2845 aa10.62□□□□□ -0.71
PTPA-223ENST00000452489 DNAH8Q96JB1 4490 aa10.61□□□□□ -0.71
PTPA-223ENST00000452489 PSORS1C2Q9UIG4 136 aa10.58□□□□□ -0.72
PTPA-223ENST00000452489 LY6G6CO95867 125 aa10.57□□□□□ -0.72
PTPA-223ENST00000452489 SPACA4Q8TDM5 124 aa10.55□□□□□ -0.72
PTPA-223ENST00000452489 CMYA5Q8N3K9 4069 aa10.54□□□□□ -0.72
PTPA-223ENST00000452489 KRTAP16-1A8MUX0 517 aa10.51□□□□□ -0.73
PTPA-223ENST00000452489 UBE2DNLQ8IWF7 75 aa10.51□□□□□ -0.73
PTPA-223ENST00000452489 Q8N1X5 172 aa10.51□□□□□ -0.73
PTPA-223ENST00000452489 DNAH7Q8WXX0 4024 aa10.49□□□□□ -0.73
PTPA-223ENST00000452489 HUWE1Q7Z6Z7 4374 aaKnown RBP10.49□□□□□ -0.73
PTPA-223ENST00000452489 TYMSOSQ8TAI1 123 aa10.48□□□□□ -0.73
PTPA-223ENST00000452489 SSBP3-AS1Q7Z2R9 100 aa10.44□□□□□ -0.74
PTPA-223ENST00000452489 TGP01266 2768 aa10.44□□□□□ -0.74
PTPA-223ENST00000452489 DNAH3Q8TD57 4116 aa10.43□□□□□ -0.74
PTPA-223ENST00000452489 DNAH17Q9UFH2 4485 aa10.42□□□□□ -0.74
PTPA-223ENST00000452489 A0A1B0GU33 70 aa10.41□□□□□ -0.74
PTPA-223ENST00000452489 STAB1Q9NY15 2570 aa10.38□□□□□ -0.75
PTPA-223ENST00000452489 STAB2Q8WWQ8 2551 aa10.35□□□□□ -0.75
PTPA-223ENST00000452489 Q6ZRN7 208 aaPredicted RBP10.34□□□□□ -0.75
PTPA-223ENST00000452489 H1FX-AS1Q4G0G2 97 aa10.34□□□□□ -0.75
PTPA-223ENST00000452489 SPINT4Q6UDR6 99 aa10.31□□□□□ -0.76
PTPA-223ENST00000452489 APLNQ9ULZ1 77 aa10.31□□□□□ -0.76
PTPA-223ENST00000452489 NBDYA0A0U1RRE5 68 aa10.28□□□□□ -0.76
PTPA-223ENST00000452489 NDUFAF8A1L188 74 aa10.28□□□□□ -0.76
PTPA-223ENST00000452489 HECTD4Q9Y4D8 3996 aa10.28□□□□□ -0.76
PTPA-223ENST00000452489 A0A087WTM6 91 aa10.27□□□□□ -0.77
PTPA-223ENST00000452489 K7ERS5 55 aa10.23□□□□□ -0.77
PTPA-223ENST00000452489 VPS13DQ5THJ4 4388 aa10.22□□□□□ -0.77
PTPA-223ENST00000452489 TPRXLQ17RH7 258 aa10.19□□□□□ -0.78
PTPA-223ENST00000452489 C20orf166-AS1Q96NR2 134 aa10.18□□□□□ -0.78
PTPA-223ENST00000452489 PLECQ15149 4684 aaKnown RBP10.18□□□□□ -0.78
PTPA-223ENST00000452489 KRTAP13-2Q52LG2 175 aa10.18□□□□□ -0.78
PTPA-223ENST00000452489 NUPR2A6NF83 97 aa10.17□□□□□ -0.78
PTPA-223ENST00000452489 KMT2AQ03164 3969 aa10.15□□□□□ -0.78
PTPA-223ENST00000452489 COX6B2Q6YFQ2 88 aa10.12□□□□□ -0.79
PTPA-223ENST00000452489 KRTAP15-1Q3LI76 137 aa10.12□□□□□ -0.79
PTPA-223ENST00000452489 KRTAP3-1Q9BYR8 98 aa10.1□□□□□ -0.79
PTPA-223ENST00000452489 KRTAP24-1Q3LI83 254 aa10.09□□□□□ -0.79
PTPA-223ENST00000452489 C10orf95Q9H7T3 257 aa10.09□□□□□ -0.79
PTPA-223ENST00000452489 A0A0A0MQY5 61 aa10.08□□□□□ -0.8
PTPA-223ENST00000452489 DYNC2H1Q8NCM8 4307 aaKnown RBP10.07□□□□□ -0.8
PTPA-223ENST00000452489 FBN3Q75N90 2809 aa10.05□□□□□ -0.8
PTPA-223ENST00000452489 MGAM2Q2M2H8 2515 aa10□□□□□ -0.81
PTPA-223ENST00000452489 DNAH2Q9P225 4427 aa9.97□□□□□ -0.81
PTPA-223ENST00000452489 RPL37P61927 97 aaKnown RBP9.96□□□□□ -0.81
PTPA-223ENST00000452489 A0A0D9SG42 100 aa9.94□□□□□ -0.82
PTPA-223ENST00000452489 DNAH11Q96DT5 4516 aa9.93□□□□□ -0.82
PTPA-223ENST00000452489 DNAH6Q9C0G6 4158 aa9.9□□□□□ -0.82
PTPA-223ENST00000452489 DMBT1Q9UGM3 2413 aaPredicted RBP9.89□□□□□ -0.83
PTPA-223ENST00000452489 KRTAP13-4Q3LI77 160 aa9.89□□□□□ -0.83
PTPA-223ENST00000452489 STARD9Q9P2P6 4700 aa9.87□□□□□ -0.83
PTPA-223ENST00000452489 KRTAP1-4P0C5Y4 121 aa9.86□□□□□ -0.83
PTPA-223ENST00000452489 PRKDCP78527 4128 aaKnown RBP9.79□□□□□ -0.84
PTPA-223ENST00000452489 KRTAP10-6P60371 365 aaPredicted RBP9.79□□□□□ -0.84
PTPA-223ENST00000452489 C9orf92A6NGG3 77 aa9.79□□□□□ -0.84
PTPA-223ENST00000452489 LRP1BQ9NZR2 4599 aa9.78□□□□□ -0.84
PTPA-223ENST00000452489 DNAH5Q8TE73 4624 aa9.72□□□□□ -0.85
PTPA-223ENST00000452489 KRTAP10-2P60368 255 aa9.67□□□□□ -0.86
PTPA-223ENST00000452489 DNHD1Q96M86 4753 aa9.66□□□□□ -0.86
PTPA-223ENST00000452489 S4R3F8 94 aa9.65□□□□□ -0.86
PTPA-223ENST00000452489 KRTAP3-2Q9BYR7 98 aa9.64□□□□□ -0.87
PTPA-223ENST00000452489 VPS13BQ7Z7G8 4022 aa9.64□□□□□ -0.87
PTPA-223ENST00000452489 KRTAP12-2P59991 146 aa9.63□□□□□ -0.87
PTPA-223ENST00000452489 LUZP6Q538Z0 58 aa9.6□□□□□ -0.87
PTPA-223ENST00000452489 KRTAP3-3Q9BYR6 98 aa9.6□□□□□ -0.87
PTPA-223ENST00000452489 KRTAP10-1P60331 282 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms