RNA–Protein interactions for RNA: ENST00000451349.1

SSXP4-201, Transcript of SSX family pseudogene 4, humanhuman

BASIC

Gene SSXP4, Length 245 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSXP4-201ENST00000451349 AKAP6Q13023 2319 aa0.76□□□□□ -2.29
SSXP4-201ENST00000451349 DNAH3Q8TD57 4116 aa0.75□□□□□ -2.29
SSXP4-201ENST00000451349 PKD1L2Q7Z442 2459 aa0.75□□□□□ -2.29
SSXP4-201ENST00000451349 APELAP0DMC3 54 aa0.75□□□□□ -2.29
SSXP4-201ENST00000451349 TNRC18O15417 2968 aaPredicted RBP0.75□□□□□ -2.29
SSXP4-201ENST00000451349 COL6A5A8TX70 2615 aa0.74□□□□□ -2.29
SSXP4-201ENST00000451349 OTOGQ6ZRI0 2925 aa0.74□□□□□ -2.29
SSXP4-201ENST00000451349 HUWE1Q7Z6Z7 4374 aaKnown RBP0.73□□□□□ -2.29
SSXP4-201ENST00000451349 SRRM2Q9UQ35 2752 aaKnown RBP0.73□□□□□ -2.29
SSXP4-201ENST00000451349 A0A096LNI7 61 aa0.73□□□□□ -2.29
SSXP4-201ENST00000451349 KRTAP8-1Q8IUC2 63 aa0.73□□□□□ -2.29
SSXP4-201ENST00000451349 PKHD1L1Q86WI1 4243 aa0.73□□□□□ -2.29
SSXP4-201ENST00000451349 CEP290O15078 2479 aa0.73□□□□□ -2.29
SSXP4-201ENST00000451349 HECTD4Q9Y4D8 3996 aa0.72□□□□□ -2.29
SSXP4-201ENST00000451349 TENM2Q9NT68 2774 aa0.72□□□□□ -2.29
SSXP4-201ENST00000451349 HTN1P15515 57 aa0.72□□□□□ -2.29
SSXP4-201ENST00000451349 WNK1Q9H4A3 2382 aa0.71□□□□□ -2.3
SSXP4-201ENST00000451349 SPRR2DP22532 72 aa0.71□□□□□ -2.3
SSXP4-201ENST00000451349 DEFB124Q8NES8 71 aa0.71□□□□□ -2.3
SSXP4-201ENST00000451349 ANK3Q12955 4377 aaKnown RBP0.71□□□□□ -2.3
SSXP4-201ENST00000451349 ZFHX4Q86UP3 3567 aa0.7□□□□□ -2.3
SSXP4-201ENST00000451349 DNAH7Q8WXX0 4024 aa0.7□□□□□ -2.3
SSXP4-201ENST00000451349 SPRR2BP35325 72 aa0.7□□□□□ -2.3
SSXP4-201ENST00000451349 DEFB1P60022 68 aa0.7□□□□□ -2.3
SSXP4-201ENST00000451349 DYNC2H1Q8NCM8 4307 aaKnown RBP0.7□□□□□ -2.3
SSXP4-201ENST00000451349 AKAP9Q99996 3911 aa0.7□□□□□ -2.3
SSXP4-201ENST00000451349 HECTD1Q9ULT8 2610 aa0.69□□□□□ -2.3
SSXP4-201ENST00000451349 UBR5O95071 2799 aaPredicted RBP0.69□□□□□ -2.3
SSXP4-201ENST00000451349 DNAH8Q96JB1 4490 aa0.69□□□□□ -2.3
SSXP4-201ENST00000451349 DEFB136Q30KP8 78 aa0.69□□□□□ -2.3
SSXP4-201ENST00000451349 CUBNO60494 3623 aa0.69□□□□□ -2.3
SSXP4-201ENST00000451349 ATRQ13535 2644 aa0.68□□□□□ -2.3
SSXP4-201ENST00000451349 BDP1A6H8Y1 2624 aa0.68□□□□□ -2.3
SSXP4-201ENST00000451349 DNAH2Q9P225 4427 aa0.68□□□□□ -2.3
SSXP4-201ENST00000451349 LPAP08519 4548 aa0.68□□□□□ -2.3
SSXP4-201ENST00000451349 NCOR1O75376 2440 aa0.68□□□□□ -2.3
SSXP4-201ENST00000451349 HSPG2P98160 4391 aa0.68□□□□□ -2.3
SSXP4-201ENST00000451349 KRTAP21-1Q3LI58 79 aa0.67□□□□□ -2.3
SSXP4-201ENST00000451349 CHD6Q8TD26 2715 aa0.66□□□□□ -2.3
SSXP4-201ENST00000451349 MT1AP04731 61 aa0.66□□□□□ -2.3
SSXP4-201ENST00000451349 DNAH6Q9C0G6 4158 aa0.66□□□□□ -2.3
SSXP4-201ENST00000451349 PDZD2O15018 2839 aa0.65□□□□□ -2.3
SSXP4-201ENST00000451349 NAV2Q8IVL1 2488 aa0.65□□□□□ -2.31
SSXP4-201ENST00000451349 PKD1P98161 4303 aa0.65□□□□□ -2.31
SSXP4-201ENST00000451349 LRP1Q07954 4544 aaKnown RBP0.64□□□□□ -2.31
SSXP4-201ENST00000451349 FRYQ5TBA9 3013 aa0.64□□□□□ -2.31
SSXP4-201ENST00000451349 SPRR2AP35326 72 aa0.64□□□□□ -2.31
SSXP4-201ENST00000451349 PIEZO1Q92508 2521 aa0.63□□□□□ -2.31
SSXP4-201ENST00000451349 SPTA1P02549 2419 aa0.63□□□□□ -2.31
SSXP4-201ENST00000451349 CREBBPQ92793 2442 aa0.63□□□□□ -2.31
SSXP4-201ENST00000451349 DMBT1Q9UGM3 2413 aaPredicted RBP0.63□□□□□ -2.31
SSXP4-201ENST00000451349 SMR3BP02814 79 aaPredicted RBP0.63□□□□□ -2.31
SSXP4-201ENST00000451349 DEFB133Q30KQ1 61 aa0.63□□□□□ -2.31
SSXP4-201ENST00000451349 SPTBN5Q9NRC6 3674 aaKnown RBP0.63□□□□□ -2.31
SSXP4-201ENST00000451349 APCP25054 2843 aa0.63□□□□□ -2.31
SSXP4-201ENST00000451349 AHNAK2Q8IVF2 5795 aa0.62□□□□□ -2.31
SSXP4-201ENST00000451349 SYNE1Q8NF91 8797 aaKnown RBP0.62□□□□□ -2.31
SSXP4-201ENST00000451349 KRTAP5-10Q6L8G5 202 aa0.62□□□□□ -2.31
SSXP4-201ENST00000451349 APC2O95996 2303 aa0.62□□□□□ -2.31
SSXP4-201ENST00000451349 NOTCH1P46531 2555 aa0.62□□□□□ -2.31
SSXP4-201ENST00000451349 CHD8Q9HCK8 2581 aa0.62□□□□□ -2.31
SSXP4-201ENST00000451349 APOBP04114 4563 aaKnown RBP0.62□□□□□ -2.31
SSXP4-201ENST00000451349 PKD1L1Q8TDX9 2849 aa0.61□□□□□ -2.31
SSXP4-201ENST00000451349 NBASA2RRP1 2371 aa0.61□□□□□ -2.31
SSXP4-201ENST00000451349 STAB1Q9NY15 2570 aa0.61□□□□□ -2.31
SSXP4-201ENST00000451349 CRYBG3Q68DQ2 2970 aa0.61□□□□□ -2.31
SSXP4-201ENST00000451349 LAMA5O15230 3695 aa0.61□□□□□ -2.31
SSXP4-201ENST00000451349 DNAH10Q8IVF4 4471 aa0.61□□□□□ -2.31
SSXP4-201ENST00000451349 RANBP2P49792 3224 aaKnown RBP0.6□□□□□ -2.31
SSXP4-201ENST00000451349 ACANP16112 2415 aa0.6□□□□□ -2.31
SSXP4-201ENST00000451349 FLGP20930 4061 aaPredicted RBP0.6□□□□□ -2.31
SSXP4-201ENST00000451349 CCDC168Q8NDH2 2452 aa0.6□□□□□ -2.31
SSXP4-201ENST00000451349 STATHP02808 62 aa0.6□□□□□ -2.31
SSXP4-201ENST00000451349 RPS29P62273 56 aaKnown RBP0.6□□□□□ -2.31
SSXP4-201ENST00000451349 KRTAP6-2Q3LI66 62 aa0.6□□□□□ -2.31
SSXP4-201ENST00000451349 Q9Y3F1 56 aa0.6□□□□□ -2.31
SSXP4-201ENST00000451349 HIVEP3Q5T1R4 2406 aa0.6□□□□□ -2.31
SSXP4-201ENST00000451349 TRIOO75962 3097 aa0.59□□□□□ -2.31
SSXP4-201ENST00000451349 ACACAQ13085 2346 aa0.59□□□□□ -2.31
SSXP4-201ENST00000451349 FAT1Q14517 4588 aa0.59□□□□□ -2.31
SSXP4-201ENST00000451349 RELNP78509 3460 aa0.59□□□□□ -2.31
SSXP4-201ENST00000451349 DNAH1Q9P2D7 4330 aa0.59□□□□□ -2.32
SSXP4-201ENST00000451349 FAT3Q8TDW7 4589 aa0.59□□□□□ -2.32
SSXP4-201ENST00000451349 NF1P21359 2839 aa0.59□□□□□ -2.32
SSXP4-201ENST00000451349 PKHD1P08F94 4074 aa0.59□□□□□ -2.32
SSXP4-201ENST00000451349 SPTBN4Q9H254 2564 aa0.58□□□□□ -2.32
SSXP4-201ENST00000451349 DCHS2Q6V1P9 2916 aa0.58□□□□□ -2.32
SSXP4-201ENST00000451349 MGAQ8IWI9 3026 aa0.58□□□□□ -2.32
SSXP4-201ENST00000451349 KRTAP19-5Q3LI72 72 aa0.58□□□□□ -2.32
SSXP4-201ENST00000451349 SETD2Q9BYW2 2564 aaPredicted RBP0.58□□□□□ -2.32
SSXP4-201ENST00000451349 PLECQ15149 4684 aaKnown RBP0.58□□□□□ -2.32
SSXP4-201ENST00000451349 CELSR3Q9NYQ7 3312 aa0.58□□□□□ -2.32
SSXP4-201ENST00000451349 FLNCQ14315 2725 aa0.57□□□□□ -2.32
SSXP4-201ENST00000451349 DMXL1Q9Y485 3027 aa0.57□□□□□ -2.32
SSXP4-201ENST00000451349 TACC2O95359 2948 aa0.57□□□□□ -2.32
SSXP4-201ENST00000451349 DNAH9Q9NYC9 4486 aa0.56□□□□□ -2.32
SSXP4-201ENST00000451349 GCN1Q92616 2671 aaKnown RBP0.56□□□□□ -2.32
SSXP4-201ENST00000451349 SPRR2EP22531 72 aa0.56□□□□□ -2.32
SSXP4-201ENST00000451349 LINC01556Q5JQF7 62 aa0.56□□□□□ -2.32
SSXP4-201ENST00000451349 DEFB108BQ8NET1 73 aa0.56□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 166.5 ms