RNA–Protein interactions for RNA: ENST00000450717.7

SMARCA4-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5 BASIC

Gene SMARCA4, Length 5,506 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-205ENST00000450717 APCP25054 2843 aa7.09□□□□□ -1.27
SMARCA4-205ENST00000450717 HIVEP1P15822 2718 aa7.08□□□□□ -1.28
SMARCA4-205ENST00000450717 SZT2Q5T011 3432 aa7.08□□□□□ -1.28
SMARCA4-205ENST00000450717 ADGRG4Q8IZF6 3080 aa7.07□□□□□ -1.28
SMARCA4-205ENST00000450717 COL12A1Q99715 3063 aa7.07□□□□□ -1.28
SMARCA4-205ENST00000450717 TACC2O95359 2948 aa7.05□□□□□ -1.28
SMARCA4-205ENST00000450717 NBEAQ8NFP9 2946 aa7.05□□□□□ -1.28
SMARCA4-205ENST00000450717 XP32Q5T750 250 aa7.05□□□□□ -1.28
SMARCA4-205ENST00000450717 VCANP13611 3396 aa7.04□□□□□ -1.28
SMARCA4-205ENST00000450717 NIPBLQ6KC79 2804 aaeCLIP7.02□□□□□ -1.294e-6■□□□□ 9.9
SMARCA4-205ENST00000450717 DNAH14Q0VDD8 3507 aa7.02□□□□□ -1.29
SMARCA4-205ENST00000450717 REV3LO60673 3130 aa7.01□□□□□ -1.29
SMARCA4-205ENST00000450717 FRYLO94915 3013 aa7.01□□□□□ -1.29
SMARCA4-205ENST00000450717 COL6A3P12111 3177 aa7□□□□□ -1.29
SMARCA4-205ENST00000450717 PP632Q6XCG6 107 aa6.99□□□□□ -1.29
SMARCA4-205ENST00000450717 FREM2Q5SZK8 3169 aa6.99□□□□□ -1.29
SMARCA4-205ENST00000450717 BOD1L1Q8NFC6 3051 aa6.99□□□□□ -1.29
SMARCA4-205ENST00000450717 DMXL2Q8TDJ6 3036 aa6.98□□□□□ -1.29
SMARCA4-205ENST00000450717 TENM4Q6N022 2769 aa6.97□□□□□ -1.29
SMARCA4-205ENST00000450717 C10orf95Q9H7T3 257 aa6.96□□□□□ -1.3
SMARCA4-205ENST00000450717 EYSQ5T1H1 3165 aa6.95□□□□□ -1.3
SMARCA4-205ENST00000450717 TPRXLQ17RH7 258 aa6.93□□□□□ -1.3
SMARCA4-205ENST00000450717 H0YAA0 97 aa6.93□□□□□ -1.3
SMARCA4-205ENST00000450717 ASH1LQ9NR48 2969 aaKnown RBP6.91□□□□□ -1.3
SMARCA4-205ENST00000450717 ZZEF1O43149 2961 aa6.9□□□□□ -1.3
SMARCA4-205ENST00000450717 HRNRQ86YZ3 2850 aaPredicted RBP6.9□□□□□ -1.31
SMARCA4-205ENST00000450717 TNRC18O15417 2968 aaPredicted RBP6.85□□□□□ -1.31
SMARCA4-205ENST00000450717 CELSR2Q9HCU4 2923 aa6.85□□□□□ -1.31
SMARCA4-205ENST00000450717 KRTAP10-8P60410 259 aa6.84□□□□□ -1.31
SMARCA4-205ENST00000450717 KRTAP13-3Q3SY46 172 aa6.84□□□□□ -1.32
SMARCA4-205ENST00000450717 ZANQ9Y493 2812 aa6.82□□□□□ -1.32
SMARCA4-205ENST00000450717 SPTBN5Q9NRC6 3674 aaKnown RBP6.81□□□□□ -1.32
SMARCA4-205ENST00000450717 DCHS2Q6V1P9 2916 aa6.79□□□□□ -1.32
SMARCA4-205ENST00000450717 A0A1B0GVY2 172 aa6.79□□□□□ -1.32
SMARCA4-205ENST00000450717 P0C880 135 aa6.77□□□□□ -1.33
SMARCA4-205ENST00000450717 USP34Q70CQ2 3546 aa6.77□□□□□ -1.33
SMARCA4-205ENST00000450717 CRYBG3Q68DQ2 2970 aa6.76□□□□□ -1.33
SMARCA4-205ENST00000450717 CFAP47Q6ZTR5 3102 aa6.75□□□□□ -1.33
SMARCA4-205ENST00000450717 SPEGQ15772 3267 aa6.74□□□□□ -1.33
SMARCA4-205ENST00000450717 DMXL1Q9Y485 3027 aa6.71□□□□□ -1.34
SMARCA4-205ENST00000450717 KRTAP10-10P60014 251 aa6.68□□□□□ -1.34
SMARCA4-205ENST00000450717 PRO2289Q9P1D8 64 aa6.68□□□□□ -1.34
SMARCA4-205ENST00000450717 FBN2P35556 2912 aa6.65□□□□□ -1.35
SMARCA4-205ENST00000450717 NF1P21359 2839 aa6.61□□□□□ -1.35
SMARCA4-205ENST00000450717 LOC400499M0QZD8 3231 aa6.56□□□□□ -1.36
SMARCA4-205ENST00000450717 MYO15AQ9UKN7 3530 aa6.54□□□□□ -1.36
SMARCA4-205ENST00000450717 CELSR1Q9NYQ6 3014 aa6.53□□□□□ -1.36
SMARCA4-205ENST00000450717 TENM1Q9UKZ4 2725 aa6.52□□□□□ -1.37
SMARCA4-205ENST00000450717 TGP01266 2768 aa6.51□□□□□ -1.37
SMARCA4-205ENST00000450717 TENM2Q9NT68 2774 aa6.51□□□□□ -1.37
SMARCA4-205ENST00000450717 TENM3Q9P273 2699 aa6.5□□□□□ -1.37
SMARCA4-205ENST00000450717 MXRA5Q9NR99 2828 aa6.5□□□□□ -1.37
SMARCA4-205ENST00000450717 KRTAP12-2P59991 146 aa6.5□□□□□ -1.37
SMARCA4-205ENST00000450717 KRTAP3-1Q9BYR8 98 aa6.44□□□□□ -1.38
SMARCA4-205ENST00000450717 KRTAP13-4Q3LI77 160 aa6.42□□□□□ -1.38
SMARCA4-205ENST00000450717 PDZD2O15018 2839 aa6.42□□□□□ -1.38
SMARCA4-205ENST00000450717 KRTAP12-1P59990 96 aa6.41□□□□□ -1.38
SMARCA4-205ENST00000450717 MUC3AQ02505 3323 aa6.35□□□□□ -1.39
SMARCA4-205ENST00000450717 WDFY3Q8IZQ1 3526 aa6.29□□□□□ -1.4
SMARCA4-205ENST00000450717 RELNP78509 3460 aa6.28□□□□□ -1.4
SMARCA4-205ENST00000450717 PKD1L1Q8TDX9 2849 aa6.26□□□□□ -1.41
SMARCA4-205ENST00000450717 KRTAP10-6P60371 365 aaPredicted RBP6.26□□□□□ -1.41
SMARCA4-205ENST00000450717 ANK3Q12955 4377 aaKnown RBP6.25□□□□□ -1.41
SMARCA4-205ENST00000450717 DMDP11532 3685 aa6.17□□□□□ -1.42
SMARCA4-205ENST00000450717 OTOGQ6ZRI0 2925 aa6.17□□□□□ -1.42
SMARCA4-205ENST00000450717 DCHS1Q96JQ0 3298 aa6.16□□□□□ -1.42
SMARCA4-205ENST00000450717 ASPMQ8IZT6 3477 aa6.16□□□□□ -1.42
SMARCA4-205ENST00000450717 NBPF19A0A087WUL8 3843 aa6.12□□□□□ -1.43
SMARCA4-205ENST00000450717 KRTAP15-1Q3LI76 137 aa6.12□□□□□ -1.43
SMARCA4-205ENST00000450717 MT1HL1P0DM35 61 aa6.11□□□□□ -1.43
SMARCA4-205ENST00000450717 LAMA5O15230 3695 aa6.11□□□□□ -1.43
SMARCA4-205ENST00000450717 VWFP04275 2813 aa6.1□□□□□ -1.43
SMARCA4-205ENST00000450717 ZFHX4Q86UP3 3567 aa6.1□□□□□ -1.43
SMARCA4-205ENST00000450717 KRTAP3-2Q9BYR7 98 aa6.05□□□□□ -1.44
SMARCA4-205ENST00000450717 KRTAP3-3Q9BYR6 98 aa6.04□□□□□ -1.44
SMARCA4-205ENST00000450717 CSMD1Q96PZ7 3565 aa6.03□□□□□ -1.44
SMARCA4-205ENST00000450717 KRTAP10-4P60372 401 aaPredicted RBP6.02□□□□□ -1.45
SMARCA4-205ENST00000450717 FBN1P35555 2871 aaKnown RBP6.01□□□□□ -1.45
SMARCA4-205ENST00000450717 FBN3Q75N90 2809 aa5.98□□□□□ -1.45
SMARCA4-205ENST00000450717 SMG1Q96Q15 3661 aaKnown RBP5.96□□□□□ -1.46
SMARCA4-205ENST00000450717 SRRM2Q9UQ35 2752 aaKnown RBP5.94□□□□□ -1.46
SMARCA4-205ENST00000450717 HUWE1Q7Z6Z7 4374 aaKnown RBP5.93□□□□□ -1.46
SMARCA4-205ENST00000450717 MEGF8Q7Z7M0 2845 aa5.91□□□□□ -1.46
SMARCA4-205ENST00000450717 ALMS1Q8TCU4 4167 aa5.86□□□□□ -1.47
SMARCA4-205ENST00000450717 INE1O15225 51 aa5.86□□□□□ -1.47
SMARCA4-205ENST00000450717 KRTAP10-12P60413 245 aa5.85□□□□□ -1.47
SMARCA4-205ENST00000450717 ZFHX3Q15911 3703 aa5.83□□□□□ -1.48
SMARCA4-205ENST00000450717 TRRAPQ9Y4A5 3859 aa5.82□□□□□ -1.48
SMARCA4-205ENST00000450717 KRTAP23-1A1A580 65 aa5.81□□□□□ -1.48
SMARCA4-205ENST00000450717 KRTAP4-5Q9BYR2 181 aa5.78□□□□□ -1.48
SMARCA4-205ENST00000450717 SVEP1Q4LDE5 3571 aa5.76□□□□□ -1.49
SMARCA4-205ENST00000450717 SPENQ96T58 3664 aaKnown RBP5.75□□□□□ -1.49
SMARCA4-205ENST00000450717 BSNQ9UPA5 3926 aa5.74□□□□□ -1.49
SMARCA4-205ENST00000450717 CUBNO60494 3623 aa5.72□□□□□ -1.49
SMARCA4-205ENST00000450717 CSMD2Q7Z408 3487 aa5.71□□□□□ -1.49
SMARCA4-205ENST00000450717 COL7A1Q02388 2944 aa5.7□□□□□ -1.5
SMARCA4-205ENST00000450717 KRTAP12-3P60328 96 aa5.68□□□□□ -1.5
SMARCA4-205ENST00000450717 CRCT1Q9UGL9 99 aa5.63□□□□□ -1.51
SMARCA4-205ENST00000450717 LCE3AQ5TA76 89 aa5.62□□□□□ -1.51
SMARCA4-205ENST00000450717 LORP23490 312 aaPredicted RBP5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 190.2 ms