RNA–Protein interactions for RNA: ENST00000442218.2

SLC48A1-201, Transcript of solute carrier family 48 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC48A1, Length 3,010 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-201ENST00000442218 Q8N9P0 234 aaPredicted RBP7.85□□□□□ -1.15
SLC48A1-201ENST00000442218 CDK2AP2O75956 126 aa7.84□□□□□ -1.15
SLC48A1-201ENST00000442218 LY6G6CO95867 125 aa7.83□□□□□ -1.16
SLC48A1-201ENST00000442218 Q6ZR54 194 aa7.82□□□□□ -1.16
SLC48A1-201ENST00000442218 WWC2-AS2Q96NR7 200 aa7.82□□□□□ -1.16
SLC48A1-201ENST00000442218 LRP1BQ9NZR2 4599 aa7.81□□□□□ -1.16
SLC48A1-201ENST00000442218 A0A1B0GVX0 72 aa7.79□□□□□ -1.16
SLC48A1-201ENST00000442218 A6NED7 52 aa7.79□□□□□ -1.16
SLC48A1-201ENST00000442218 DNAH5Q8TE73 4624 aa7.79□□□□□ -1.16
SLC48A1-201ENST00000442218 IGLV5-52A0A0A0MRZ9 124 aa7.78□□□□□ -1.16
SLC48A1-201ENST00000442218 PMAIP1Q13794 54 aa7.78□□□□□ -1.16
SLC48A1-201ENST00000442218 Q5W150 140 aa7.78□□□□□ -1.16
SLC48A1-201ENST00000442218 ALMS1Q8TCU4 4167 aa7.78□□□□□ -1.16
SLC48A1-201ENST00000442218 V9GYY9 64 aa7.77□□□□□ -1.17
SLC48A1-201ENST00000442218 FAT2Q9NYQ8 4349 aa7.76□□□□□ -1.17
SLC48A1-201ENST00000442218 SPANXA2-OT1Q8N9U9 137 aa7.76□□□□□ -1.17
SLC48A1-201ENST00000442218 PRR26Q8N8Z3 221 aa7.76□□□□□ -1.17
SLC48A1-201ENST00000442218 IGLV7-46A0A075B6I9 117 aa7.75□□□□□ -1.17
SLC48A1-201ENST00000442218 MRPL34Q9BQ48 92 aaKnown RBP7.75□□□□□ -1.17
SLC48A1-201ENST00000442218 ZNF861PO60384 105 aa7.75□□□□□ -1.17
SLC48A1-201ENST00000442218 KRTAP10-2P60368 255 aa7.75□□□□□ -1.17
SLC48A1-201ENST00000442218 C1orf134Q5TEV5 83 aa7.75□□□□□ -1.17
SLC48A1-201ENST00000442218 PKHD1P08F94 4074 aa7.74□□□□□ -1.17
SLC48A1-201ENST00000442218 H3BPC8 53 aa7.73□□□□□ -1.17
SLC48A1-201ENST00000442218 LCA10Q71F78 164 aa7.73□□□□□ -1.17
SLC48A1-201ENST00000442218 HRES1P13985 223 aa7.73□□□□□ -1.17
SLC48A1-201ENST00000442218 LINC00483Q53H64 154 aa7.7□□□□□ -1.18
SLC48A1-201ENST00000442218 LIMD2Q9BT23 127 aa7.7□□□□□ -1.18
SLC48A1-201ENST00000442218 SPINK7P58062 85 aa7.68□□□□□ -1.18
SLC48A1-201ENST00000442218 TP53AIP1Q9HCN2 124 aa7.68□□□□□ -1.18
SLC48A1-201ENST00000442218 ZNF706Q9Y5V0 76 aaPredicted RBP7.68□□□□□ -1.18
SLC48A1-201ENST00000442218 SACSQ9NZJ4 4579 aa7.68□□□□□ -1.18
SLC48A1-201ENST00000442218 ASB16-AS1Q495Z4 193 aa7.68□□□□□ -1.18
SLC48A1-201ENST00000442218 PKD1P98161 4303 aa7.67□□□□□ -1.18
SLC48A1-201ENST00000442218 VPS13BQ7Z7G8 4022 aa7.67□□□□□ -1.18
SLC48A1-201ENST00000442218 IGLV7-43P04211 117 aa7.66□□□□□ -1.18
SLC48A1-201ENST00000442218 PLAC8Q9NZF1 115 aa7.65□□□□□ -1.18
SLC48A1-201ENST00000442218 SEC61GP60059 68 aa7.63□□□□□ -1.19
SLC48A1-201ENST00000442218 LOC101927531A0A1B0GV80 90 aa7.62□□□□□ -1.19
SLC48A1-201ENST00000442218 Q75L30 129 aa7.6□□□□□ -1.19
SLC48A1-201ENST00000442218 KRTAP10-1P60331 282 aa7.58□□□□□ -1.2
SLC48A1-201ENST00000442218 FAT1Q14517 4588 aa7.58□□□□□ -1.2
SLC48A1-201ENST00000442218 IGKV2D-30A0A075B6S6 120 aa7.57□□□□□ -1.2
SLC48A1-201ENST00000442218 IGKV2-30P06310 120 aa7.57□□□□□ -1.2
SLC48A1-201ENST00000442218 LINC00313P59037 77 aa7.56□□□□□ -1.2
SLC48A1-201ENST00000442218 KRTAP13-2Q52LG2 175 aa7.56□□□□□ -1.2
SLC48A1-201ENST00000442218 LINC01558Q9Y6Z2 57 aa7.55□□□□□ -1.2
SLC48A1-201ENST00000442218 KRTAP13-3Q3SY46 172 aa7.52□□□□□ -1.21
SLC48A1-201ENST00000442218 KMT2CQ8NEZ4 4911 aaKnown RBP7.51□□□□□ -1.21
SLC48A1-201ENST00000442218 SPINK1P00995 79 aa7.51□□□□□ -1.21
SLC48A1-201ENST00000442218 CDC42SE1Q9NRR8 79 aa7.51□□□□□ -1.21
SLC48A1-201ENST00000442218 ATP11AUNQ6ZP68 121 aa7.49□□□□□ -1.21
SLC48A1-201ENST00000442218 SMR3BP02814 79 aaPredicted RBP7.48□□□□□ -1.21
SLC48A1-201ENST00000442218 ACYP2P14621 99 aa7.48□□□□□ -1.21
SLC48A1-201ENST00000442218 RYR2Q92736 4967 aa7.47□□□□□ -1.21
SLC48A1-201ENST00000442218 A6NN06 94 aa7.46□□□□□ -1.22
SLC48A1-201ENST00000442218 SSBP3-AS1Q7Z2R9 100 aa7.46□□□□□ -1.22
SLC48A1-201ENST00000442218 KTN1-AS1Q86SY8 53 aa7.46□□□□□ -1.22
SLC48A1-201ENST00000442218 PRAC1Q96KF2 57 aa7.45□□□□□ -1.22
SLC48A1-201ENST00000442218 Q6ZSA8 131 aa7.45□□□□□ -1.22
SLC48A1-201ENST00000442218 ADM2Q7Z4H4 148 aa7.44□□□□□ -1.22
SLC48A1-201ENST00000442218 Q8N1X5 172 aa7.44□□□□□ -1.22
SLC48A1-201ENST00000442218 DYNC1H1Q14204 4646 aaKnown RBP7.44□□□□□ -1.22
SLC48A1-201ENST00000442218 PLA2G1BP04054 148 aaKnown RBP7.43□□□□□ -1.22
SLC48A1-201ENST00000442218 RBM12B-AS1Q9P1G2 102 aa7.42□□□□□ -1.22
SLC48A1-201ENST00000442218 A0A1B0GU69 56 aa7.41□□□□□ -1.22
SLC48A1-201ENST00000442218 FAM229AH3BQW9 127 aa7.41□□□□□ -1.22
SLC48A1-201ENST00000442218 C7orf65Q6ZTY9 151 aa7.41□□□□□ -1.22
SLC48A1-201ENST00000442218 C8orf87E5RJ46 101 aa7.4□□□□□ -1.22
SLC48A1-201ENST00000442218 DMAC1Q96GE9 116 aa7.4□□□□□ -1.23
SLC48A1-201ENST00000442218 KRTAP1-4P0C5Y4 121 aa7.38□□□□□ -1.23
SLC48A1-201ENST00000442218 C4orf48Q5BLP8 95 aa7.38□□□□□ -1.23
SLC48A1-201ENST00000442218 C9orf92A6NGG3 77 aa7.37□□□□□ -1.23
SLC48A1-201ENST00000442218 KRTAP16-1A8MUX0 517 aa7.37□□□□□ -1.23
SLC48A1-201ENST00000442218 TYMSOSQ8TAI1 123 aa7.37□□□□□ -1.23
SLC48A1-201ENST00000442218 FLG2Q5D862 2391 aaPredicted RBP7.35□□□□□ -1.23
SLC48A1-201ENST00000442218 APOBP04114 4563 aaKnown RBP7.34□□□□□ -1.23
SLC48A1-201ENST00000442218 A0A1B0GVY2 172 aa7.34□□□□□ -1.23
SLC48A1-201ENST00000442218 RYR3Q15413 4870 aa7.32□□□□□ -1.24
SLC48A1-201ENST00000442218 LRP1Q07954 4544 aaKnown RBP7.31□□□□□ -1.24
SLC48A1-201ENST00000442218 MYCBP2O75592 4640 aa7.3□□□□□ -1.24
SLC48A1-201ENST00000442218 DMBT1Q9UGM3 2413 aaPredicted RBP7.3□□□□□ -1.24
SLC48A1-201ENST00000442218 MIR22HGQ0VDD5 57 aa7.27□□□□□ -1.25
SLC48A1-201ENST00000442218 LINC00304Q8N9R0 145 aa7.22□□□□□ -1.25
SLC48A1-201ENST00000442218 UQCR11O14957 56 aa7.22□□□□□ -1.25
SLC48A1-201ENST00000442218 SPATA8Q6RVD6 105 aa7.17□□□□□ -1.26
SLC48A1-201ENST00000442218 PKHD1L1Q86WI1 4243 aa7.15□□□□□ -1.27
SLC48A1-201ENST00000442218 HSPG2P98160 4391 aa7.15□□□□□ -1.27
SLC48A1-201ENST00000442218 KRTAP10-4P60372 401 aaPredicted RBP7.14□□□□□ -1.27
SLC48A1-201ENST00000442218 CSAG1Q6PB30 78 aa7.11□□□□□ -1.27
SLC48A1-201ENST00000442218 FAT3Q8TDW7 4589 aa7.11□□□□□ -1.27
SLC48A1-201ENST00000442218 KRTAP3-1Q9BYR8 98 aa7.08□□□□□ -1.28
SLC48A1-201ENST00000442218 CRIPTQ9P021 101 aa7.08□□□□□ -1.28
SLC48A1-201ENST00000442218 KIAA1109Q2LD37 5005 aa7.08□□□□□ -1.28
SLC48A1-201ENST00000442218 RYR1P21817 5038 aa7.06□□□□□ -1.28
SLC48A1-201ENST00000442218 EPPK1P58107 5090 aaKnown RBP7.06□□□□□ -1.28
SLC48A1-201ENST00000442218 H0YAA0 97 aa7.05□□□□□ -1.28
SLC48A1-201ENST00000442218 KRTAP17-1Q9BYP8 105 aa7.03□□□□□ -1.28
SLC48A1-201ENST00000442218 LPAP08519 4548 aa7□□□□□ -1.29
SLC48A1-201ENST00000442218 Q5VSD8 79 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms