RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 SMR3AQ99954 134 aa2.01□□□□□ -2.09
CDC42BPA-207ENST00000441725 PRKDCP78527 4128 aaKnown RBP2.01□□□□□ -2.09
CDC42BPA-207ENST00000441725 SVEP1Q4LDE5 3571 aa2.01□□□□□ -2.09
CDC42BPA-207ENST00000441725 HERC2O95714 4834 aa2.01□□□□□ -2.09
CDC42BPA-207ENST00000441725 CPSF4LA6NMK7 179 aaKnown RBP2□□□□□ -2.09
CDC42BPA-207ENST00000441725 RPL38P63173 70 aaKnown RBP2□□□□□ -2.09
CDC42BPA-207ENST00000441725 LCE3DQ9BYE3 92 aa2□□□□□ -2.09
CDC42BPA-207ENST00000441725 TTTY10Q9BZA0 68 aa2□□□□□ -2.09
CDC42BPA-207ENST00000441725 PKDREJQ9NTG1 2253 aa1.99□□□□□ -2.09
CDC42BPA-207ENST00000441725 DEFB119Q8N690 84 aa1.99□□□□□ -2.09
CDC42BPA-207ENST00000441725 SSBP3-AS1Q7Z2R9 100 aa1.98□□□□□ -2.09
CDC42BPA-207ENST00000441725 ARHGAP5-AS1Q96IT6 56 aa1.98□□□□□ -2.09
CDC42BPA-207ENST00000441725 G3V318 75 aa1.98□□□□□ -2.09
CDC42BPA-207ENST00000441725 PRB3Q04118 309 aaPredicted RBP1.98□□□□□ -2.09
CDC42BPA-207ENST00000441725 BRD3OSQ6XYD6 125 aa1.98□□□□□ -2.09
CDC42BPA-207ENST00000441725 Q6ZQY7 126 aa1.98□□□□□ -2.09
CDC42BPA-207ENST00000441725 CCL19Q99731 98 aa1.98□□□□□ -2.09
CDC42BPA-207ENST00000441725 TENM3Q9P273 2699 aa1.98□□□□□ -2.09
CDC42BPA-207ENST00000441725 LINC00308Q8TCZ7 52 aa1.97□□□□□ -2.09
CDC42BPA-207ENST00000441725 M0R2N4 97 aa1.96□□□□□ -2.1
CDC42BPA-207ENST00000441725 INE1O15225 51 aa1.96□□□□□ -2.1
CDC42BPA-207ENST00000441725 LINC00158P58513 81 aa1.96□□□□□ -2.1
CDC42BPA-207ENST00000441725 SONP18583 2426 aaKnown RBP1.96□□□□□ -2.1
CDC42BPA-207ENST00000441725 ZANQ9Y493 2812 aa1.96□□□□□ -2.1
CDC42BPA-207ENST00000441725 Q6ZRN7 208 aaPredicted RBP1.95□□□□□ -2.1
CDC42BPA-207ENST00000441725 SMIM2Q9BVW6 85 aa1.95□□□□□ -2.1
CDC42BPA-207ENST00000441725 ANK3Q12955 4377 aaKnown RBP1.95□□□□□ -2.1
CDC42BPA-207ENST00000441725 TRRAPQ9Y4A5 3859 aa1.95□□□□□ -2.1
CDC42BPA-207ENST00000441725 CNFNQ9BYD5 112 aa1.95□□□□□ -2.1
CDC42BPA-207ENST00000441725 HIVEP2P31629 2446 aa1.94□□□□□ -2.1
CDC42BPA-207ENST00000441725 Q6ZRX8 168 aa1.94□□□□□ -2.1
CDC42BPA-207ENST00000441725 SMIM11BQ8TCY0 68 aa1.94□□□□□ -2.1
CDC42BPA-207ENST00000441725 CRIPTQ9P021 101 aa1.93□□□□□ -2.1
CDC42BPA-207ENST00000441725 CDKN2A-AS1Q9UH64 79 aa1.93□□□□□ -2.1
CDC42BPA-207ENST00000441725 CNTRLQ7Z7A1 2325 aa1.93□□□□□ -2.1
CDC42BPA-207ENST00000441725 DEFB131BA0A096LNP1 70 aa1.93□□□□□ -2.1
CDC42BPA-207ENST00000441725 KRTAP10-10P60014 251 aa1.93□□□□□ -2.1
CDC42BPA-207ENST00000441725 DEFB106AQ8N104 65 aa1.93□□□□□ -2.1
CDC42BPA-207ENST00000441725 A0A096LNT2 108 aa1.92□□□□□ -2.1
CDC42BPA-207ENST00000441725 LINC01590Q5TEZ4 76 aa1.92□□□□□ -2.1
CDC42BPA-207ENST00000441725 AKAP6Q13023 2319 aa1.92□□□□□ -2.1
CDC42BPA-207ENST00000441725 H3BSH0 61 aa1.92□□□□□ -2.1
CDC42BPA-207ENST00000441725 NDUFA1O15239 70 aa1.92□□□□□ -2.1
CDC42BPA-207ENST00000441725 LY6G6CO95867 125 aa1.92□□□□□ -2.1
CDC42BPA-207ENST00000441725 TENM2Q9NT68 2774 aa1.92□□□□□ -2.1
CDC42BPA-207ENST00000441725 GVQW2A0A096LPI5 108 aaPredicted RBP1.91□□□□□ -2.1
CDC42BPA-207ENST00000441725 LCE3AQ5TA76 89 aa1.91□□□□□ -2.1
CDC42BPA-207ENST00000441725 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.91□□□□□ -2.1
CDC42BPA-207ENST00000441725 PLAC4Q8WY50 150 aa1.91□□□□□ -2.1
CDC42BPA-207ENST00000441725 KIAA1109Q2LD37 5005 aa1.91□□□□□ -2.1
CDC42BPA-207ENST00000441725 COL7A1Q02388 2944 aa1.91□□□□□ -2.1
CDC42BPA-207ENST00000441725 Q8IZM0 81 aa1.91□□□□□ -2.1
CDC42BPA-207ENST00000441725 HERC1Q15751 4861 aa1.9□□□□□ -2.11
CDC42BPA-207ENST00000441725 DYNC2H1Q8NCM8 4307 aaKnown RBP1.9□□□□□ -2.11
CDC42BPA-207ENST00000441725 SACSQ9NZJ4 4579 aa1.89□□□□□ -2.11
CDC42BPA-207ENST00000441725 SPTY2D1-AS1A0A0U1RR47 76 aa1.89□□□□□ -2.11
CDC42BPA-207ENST00000441725 MRPL33O75394 65 aaKnown RBP1.89□□□□□ -2.11
CDC42BPA-207ENST00000441725 ANGP03950 147 aaKnown RBP1.89□□□□□ -2.11
CDC42BPA-207ENST00000441725 AHNAKQ09666 5890 aaKnown RBP1.89□□□□□ -2.11
CDC42BPA-207ENST00000441725 ABCA13Q86UQ4 5058 aa1.89□□□□□ -2.11
CDC42BPA-207ENST00000441725 KRTAP10-1P60331 282 aa1.88□□□□□ -2.11
CDC42BPA-207ENST00000441725 DEFB133Q30KQ1 61 aa1.88□□□□□ -2.11
CDC42BPA-207ENST00000441725 HRNRQ86YZ3 2850 aaPredicted RBP1.88□□□□□ -2.11
CDC42BPA-207ENST00000441725 DNAH1Q9P2D7 4330 aa1.87□□□□□ -2.11
CDC42BPA-207ENST00000441725 ALMS1Q8TCU4 4167 aa1.87□□□□□ -2.11
CDC42BPA-207ENST00000441725 OBSCNQ5VST9 7968 aa1.87□□□□□ -2.11
CDC42BPA-207ENST00000441725 CCL22O00626 93 aa1.86□□□□□ -2.11
CDC42BPA-207ENST00000441725 DEFB109BQ30KR1 87 aa1.86□□□□□ -2.11
CDC42BPA-207ENST00000441725 KRTAP4-3Q9BYR4 195 aa1.86□□□□□ -2.11
CDC42BPA-207ENST00000441725 U3KQA8 63 aa1.86□□□□□ -2.11
CDC42BPA-207ENST00000441725 LINC00575Q6W349 94 aa1.85□□□□□ -2.11
CDC42BPA-207ENST00000441725 CMYA5Q8N3K9 4069 aa1.84□□□□□ -2.11
CDC42BPA-207ENST00000441725 RPL39P62891 51 aaKnown RBP1.84□□□□□ -2.11
CDC42BPA-207ENST00000441725 C10orf99Q6UWK7 81 aa1.84□□□□□ -2.11
CDC42BPA-207ENST00000441725 USF3Q68DE3 2245 aa1.83□□□□□ -2.12
CDC42BPA-207ENST00000441725 PLCE1Q9P212 2302 aa1.83□□□□□ -2.12
CDC42BPA-207ENST00000441725 FLG2Q5D862 2391 aaPredicted RBP1.83□□□□□ -2.12
CDC42BPA-207ENST00000441725 POLR2KP53803 58 aaKnown RBP1.82□□□□□ -2.12
CDC42BPA-207ENST00000441725 SPINK9Q5DT21 86 aa1.82□□□□□ -2.12
CDC42BPA-207ENST00000441725 COX14Q96I36 57 aa1.82□□□□□ -2.12
CDC42BPA-207ENST00000441725 STAB2Q8WWQ8 2551 aa1.82□□□□□ -2.12
CDC42BPA-207ENST00000441725 I3L2K1 104 aa1.82□□□□□ -2.12
CDC42BPA-207ENST00000441725 K7EQZ3 153 aa1.82□□□□□ -2.12
CDC42BPA-207ENST00000441725 STATHP02808 62 aa1.82□□□□□ -2.12
CDC42BPA-207ENST00000441725 DEFB110Q30KQ9 67 aa1.82□□□□□ -2.12
CDC42BPA-207ENST00000441725 PCOTHQ58A44 107 aa1.82□□□□□ -2.12
CDC42BPA-207ENST00000441725 RPL39LQ96EH5 51 aaKnown RBP1.82□□□□□ -2.12
CDC42BPA-207ENST00000441725 H0YAA0 97 aa1.81□□□□□ -2.12
CDC42BPA-207ENST00000441725 RPS27P42677 84 aaKnown RBP1.81□□□□□ -2.12
CDC42BPA-207ENST00000441725 KRTAP6-3Q3LI67 103 aa1.81□□□□□ -2.12
CDC42BPA-207ENST00000441725 ROS1P08922 2347 aa1.81□□□□□ -2.12
CDC42BPA-207ENST00000441725 LYNX1G3V0Z9 82 aa1.81□□□□□ -2.12
CDC42BPA-207ENST00000441725 PP632Q6XCG6 107 aa1.81□□□□□ -2.12
CDC42BPA-207ENST00000441725 KRTAP13-4Q3LI77 160 aa1.79□□□□□ -2.12
CDC42BPA-207ENST00000441725 MINOS1Q5TGZ0 78 aa1.79□□□□□ -2.12
CDC42BPA-207ENST00000441725 C10orf95Q9H7T3 257 aa1.79□□□□□ -2.12
CDC42BPA-207ENST00000441725 FRAS1Q86XX4 4008 aa1.79□□□□□ -2.12
CDC42BPA-207ENST00000441725 LELP1Q5T871 98 aa1.78□□□□□ -2.12
CDC42BPA-207ENST00000441725 LEAP2Q969E1 77 aa1.78□□□□□ -2.12
CDC42BPA-207ENST00000441725 MRPL34Q9BQ48 92 aaKnown RBP1.78□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms