RNA–Protein interactions for RNA: ENST00000439958.7

CPSF7-205, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF7, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-205ENST00000439958 C8orf17Q9NRJ1 99 aa8.69□□□□□ -1.02
CPSF7-205ENST00000439958 RETNLBQ9BQ08 111 aa8.68□□□□□ -1.02
CPSF7-205ENST00000439958 TMEM254Q8TBM7 123 aa8.68□□□□□ -1.02
CPSF7-205ENST00000439958 MMP24-AS1A0A0U1RRL7 71 aa8.67□□□□□ -1.02
CPSF7-205ENST00000439958 C1orf195Q5TG92 126 aa8.67□□□□□ -1.02
CPSF7-205ENST00000439958 SPINK1P00995 79 aa8.64□□□□□ -1.03
CPSF7-205ENST00000439958 EPPK1P58107 5090 aaKnown RBP8.64□□□□□ -1.03
CPSF7-205ENST00000439958 KRTAP10-4P60372 401 aaPredicted RBP8.63□□□□□ -1.03
CPSF7-205ENST00000439958 LINC00208Q96KT6 92 aa8.63□□□□□ -1.03
CPSF7-205ENST00000439958 MP68P56378 58 aa8.62□□□□□ -1.03
CPSF7-205ENST00000439958 KRTAP29-1A8MX34 341 aaPredicted RBP8.6□□□□□ -1.03
CPSF7-205ENST00000439958 LINC00313P59037 77 aa8.6□□□□□ -1.03
CPSF7-205ENST00000439958 LRP1Q07954 4544 aaKnown RBP8.6□□□□□ -1.03
CPSF7-205ENST00000439958 PRR4Q16378 134 aa8.6□□□□□ -1.03
CPSF7-205ENST00000439958 H0Y9P7 68 aa8.59□□□□□ -1.03
CPSF7-205ENST00000439958 MRPL34Q9BQ48 92 aaKnown RBP8.59□□□□□ -1.03
CPSF7-205ENST00000439958 C9orf92A6NGG3 77 aa8.58□□□□□ -1.04
CPSF7-205ENST00000439958 HSPG2P98160 4391 aa8.57□□□□□ -1.04
CPSF7-205ENST00000439958 SPAG11AQ6PDA7 123 aa8.55□□□□□ -1.04
CPSF7-205ENST00000439958 C5orf47Q569G3 176 aa8.54□□□□□ -1.04
CPSF7-205ENST00000439958 RYR1P21817 5038 aa8.54□□□□□ -1.04
CPSF7-205ENST00000439958 MYCBP2O75592 4640 aa8.54□□□□□ -1.04
CPSF7-205ENST00000439958 TRAV22A0A0B4J277 110 aa8.53□□□□□ -1.04
CPSF7-205ENST00000439958 KRTAP17-1Q9BYP8 105 aa8.53□□□□□ -1.04
CPSF7-205ENST00000439958 KLKP1Q107X0 134 aa8.53□□□□□ -1.04
CPSF7-205ENST00000439958 PCOTHQ58A44 107 aa8.53□□□□□ -1.04
CPSF7-205ENST00000439958 C1orf64Q8NEQ6 169 aa8.52□□□□□ -1.05
CPSF7-205ENST00000439958 H7BZZ5 65 aa8.51□□□□□ -1.05
CPSF7-205ENST00000439958 Q8N1X5 172 aa8.51□□□□□ -1.05
CPSF7-205ENST00000439958 A0A0U1RQV1 116 aa8.51□□□□□ -1.05
CPSF7-205ENST00000439958 ASB16-AS1Q495Z4 193 aa8.5□□□□□ -1.05
CPSF7-205ENST00000439958 FAM236DA0A1B0GTK5 79 aa8.49□□□□□ -1.05
CPSF7-205ENST00000439958 FAM236CP0DP71 79 aa8.49□□□□□ -1.05
CPSF7-205ENST00000439958 TMEM258P61165 79 aa8.49□□□□□ -1.05
CPSF7-205ENST00000439958 C8orf87E5RJ46 101 aa8.48□□□□□ -1.05
CPSF7-205ENST00000439958 Q5XG85 94 aa8.47□□□□□ -1.05
CPSF7-205ENST00000439958 TP53AIP1Q9HCN2 124 aa8.46□□□□□ -1.06
CPSF7-205ENST00000439958 NDUFC1O43677 76 aa8.43□□□□□ -1.06
CPSF7-205ENST00000439958 Q5W150 140 aa8.43□□□□□ -1.06
CPSF7-205ENST00000439958 IGKV2D-30A0A075B6S6 120 aa8.41□□□□□ -1.06
CPSF7-205ENST00000439958 IGKV2-30P06310 120 aa8.41□□□□□ -1.06
CPSF7-205ENST00000439958 KRTAP4-5Q9BYR2 181 aa8.41□□□□□ -1.06
CPSF7-205ENST00000439958 PKHD1L1Q86WI1 4243 aa8.37□□□□□ -1.07
CPSF7-205ENST00000439958 RPS29P62273 56 aaKnown RBP8.36□□□□□ -1.07
CPSF7-205ENST00000439958 KRTAP10-8P60410 259 aa8.35□□□□□ -1.07
CPSF7-205ENST00000439958 ZCCHC13Q8WW36 166 aaKnown RBP8.34□□□□□ -1.07
CPSF7-205ENST00000439958 KRTAP16-1A8MUX0 517 aa8.32□□□□□ -1.08
CPSF7-205ENST00000439958 Q8N9P0 234 aaPredicted RBP8.32□□□□□ -1.08
CPSF7-205ENST00000439958 IGLV7-46A0A075B6I9 117 aa8.3□□□□□ -1.08
CPSF7-205ENST00000439958 H3BPC8 53 aa8.3□□□□□ -1.08
CPSF7-205ENST00000439958 FAT3Q8TDW7 4589 aa8.3□□□□□ -1.08
CPSF7-205ENST00000439958 J3QL48 77 aa8.29□□□□□ -1.08
CPSF7-205ENST00000439958 LOC101927531A0A1B0GV80 90 aa8.26□□□□□ -1.09
CPSF7-205ENST00000439958 MT1HL1P0DM35 61 aa8.25□□□□□ -1.09
CPSF7-205ENST00000439958 OXTP01178 125 aa8.24□□□□□ -1.09
CPSF7-205ENST00000439958 CYP4F30PQ9H0H9 118 aa8.24□□□□□ -1.09
CPSF7-205ENST00000439958 SERP1Q9Y6X1 66 aa8.23□□□□□ -1.09
CPSF7-205ENST00000439958 ATP5EP56381 51 aaPredicted RBP8.23□□□□□ -1.09
CPSF7-205ENST00000439958 TNXBP22105 4242 aa8.22□□□□□ -1.09
CPSF7-205ENST00000439958 MPLKIPQ8TAP9 179 aa8.21□□□□□ -1.1
CPSF7-205ENST00000439958 ABCA13Q86UQ4 5058 aa8.19□□□□□ -1.1
CPSF7-205ENST00000439958 HRES1P13985 223 aa8.18□□□□□ -1.1
CPSF7-205ENST00000439958 KRTAP13-3Q3SY46 172 aa8.17□□□□□ -1.1
CPSF7-205ENST00000439958 HERC2O95714 4834 aa8.17□□□□□ -1.1
CPSF7-205ENST00000439958 ATP11AUNQ6ZP68 121 aa8.16□□□□□ -1.1
CPSF7-205ENST00000439958 C4orf26Q17RF5 130 aa8.14□□□□□ -1.11
CPSF7-205ENST00000439958 C7orf65Q6ZTY9 151 aa8.14□□□□□ -1.11
CPSF7-205ENST00000439958 RPS28P62857 69 aaKnown RBP8.13□□□□□ -1.11
CPSF7-205ENST00000439958 FP248Q71RG6 208 aaPredicted RBP8.13□□□□□ -1.11
CPSF7-205ENST00000439958 SPANXA2-OT1Q8N9U9 137 aa8.12□□□□□ -1.11
CPSF7-205ENST00000439958 C20orf166-AS1Q96NR2 134 aa8.12□□□□□ -1.11
CPSF7-205ENST00000439958 A8MUU9 505 aa8.11□□□□□ -1.11
CPSF7-205ENST00000439958 COA5Q86WW8 74 aa8.1□□□□□ -1.11
CPSF7-205ENST00000439958 CHKB-CPT1BH3BT56 60 aa8.1□□□□□ -1.11
CPSF7-205ENST00000439958 BIRC6Q9NR09 4857 aa8.09□□□□□ -1.11
CPSF7-205ENST00000439958 SPINK7P58062 85 aa8.09□□□□□ -1.11
CPSF7-205ENST00000439958 XP32Q5T750 250 aa8.08□□□□□ -1.12
CPSF7-205ENST00000439958 SMIM26A0A096LP01 95 aa8.06□□□□□ -1.12
CPSF7-205ENST00000439958 Q75L30 129 aa8.05□□□□□ -1.12
CPSF7-205ENST00000439958 ACYP2P14621 99 aa8.02□□□□□ -1.13
CPSF7-205ENST00000439958 LPAP08519 4548 aa8□□□□□ -1.13
CPSF7-205ENST00000439958 PSPHP1O15172 72 aa8□□□□□ -1.13
CPSF7-205ENST00000439958 RPL37P61927 97 aaKnown RBP8□□□□□ -1.13
CPSF7-205ENST00000439958 LRP2P98164 4655 aa7.99□□□□□ -1.13
CPSF7-205ENST00000439958 DMAC1Q96GE9 116 aa7.94□□□□□ -1.14
CPSF7-205ENST00000439958 PCLOQ9Y6V0 5065 aa7.92□□□□□ -1.14
CPSF7-205ENST00000439958 TPRXLQ17RH7 258 aa7.91□□□□□ -1.14
CPSF7-205ENST00000439958 PRR15LQ9BU68 103 aa7.89□□□□□ -1.15
CPSF7-205ENST00000439958 HERC1Q15751 4861 aa7.88□□□□□ -1.15
CPSF7-205ENST00000439958 A8MUN3 132 aa7.87□□□□□ -1.15
CPSF7-205ENST00000439958 COX6B2Q6YFQ2 88 aa7.79□□□□□ -1.16
CPSF7-205ENST00000439958 V9GYY9 64 aa7.78□□□□□ -1.16
CPSF7-205ENST00000439958 BRK1Q8WUW1 75 aa7.78□□□□□ -1.16
CPSF7-205ENST00000439958 KRTAP3-1Q9BYR8 98 aa7.78□□□□□ -1.16
CPSF7-205ENST00000439958 Q1T7F1 81 aa7.77□□□□□ -1.17
CPSF7-205ENST00000439958 SEC61BP60468 96 aaKnown RBP7.75□□□□□ -1.17
CPSF7-205ENST00000439958 A0A1B0GU69 56 aa7.72□□□□□ -1.17
CPSF7-205ENST00000439958 A6NED7 52 aa7.71□□□□□ -1.17
CPSF7-205ENST00000439958 RBM12B-AS1Q9P1G2 102 aa7.71□□□□□ -1.18
CPSF7-205ENST00000439958 MUC2Q02817 5179 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms