RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 TNRC18O15417 2968 aaPredicted RBP8.83□□□□□ -1
PTPN13-204ENST00000436978 BOD1L1Q8NFC6 3051 aa8.8□□□□□ -1
PTPN13-204ENST00000436978 CRYBG3Q68DQ2 2970 aa8.79□□□□□ -1
PTPN13-204ENST00000436978 HIVEP1P15822 2718 aa8.77□□□□□ -1.01
PTPN13-204ENST00000436978 H3BS24 57 aa8.77□□□□□ -1.01
PTPN13-204ENST00000436978 DMXL2Q8TDJ6 3036 aa8.76□□□□□ -1.01
PTPN13-204ENST00000436978 COL12A1Q99715 3063 aa8.72□□□□□ -1.01
PTPN13-204ENST00000436978 ATMQ13315 3056 aa8.72□□□□□ -1.01
PTPN13-204ENST00000436978 KRTAP25-1Q3LHN0 102 aa8.71□□□□□ -1.01
PTPN13-204ENST00000436978 NBEAQ8NFP9 2946 aa8.71□□□□□ -1.02
PTPN13-204ENST00000436978 ADGRG4Q8IZF6 3080 aa8.7□□□□□ -1.02
PTPN13-204ENST00000436978 ZZEF1O43149 2961 aa8.7□□□□□ -1.02
PTPN13-204ENST00000436978 A8MU10 97 aa8.68□□□□□ -1.02
PTPN13-204ENST00000436978 FREM2Q5SZK8 3169 aa8.67□□□□□ -1.02
PTPN13-204ENST00000436978 TACC2O95359 2948 aa8.67□□□□□ -1.02
PTPN13-204ENST00000436978 TNP1P09430 55 aa8.66□□□□□ -1.02
PTPN13-204ENST00000436978 A6NN06 94 aa8.64□□□□□ -1.03
PTPN13-204ENST00000436978 NIPBLQ6KC79 2804 aaeCLIP8.61□□□□□ -1.03
PTPN13-204ENST00000436978 HRNRQ86YZ3 2850 aaPredicted RBP8.6□□□□□ -1.03
PTPN13-204ENST00000436978 ASH1LQ9NR48 2969 aaKnown RBP8.6□□□□□ -1.03
PTPN13-204ENST00000436978 CELSR2Q9HCU4 2923 aa8.56□□□□□ -1.04
PTPN13-204ENST00000436978 XP32Q5T750 250 aa8.55□□□□□ -1.04
PTPN13-204ENST00000436978 SPEGQ15772 3267 aa8.53□□□□□ -1.04
PTPN13-204ENST00000436978 TPRXLQ17RH7 258 aa8.53□□□□□ -1.04
PTPN13-204ENST00000436978 DMXL1Q9Y485 3027 aa8.53□□□□□ -1.04
PTPN13-204ENST00000436978 EYSQ5T1H1 3165 aa8.52□□□□□ -1.04
PTPN13-204ENST00000436978 KRTAP1-4P0C5Y4 121 aa8.52□□□□□ -1.05
PTPN13-204ENST00000436978 CFAP47Q6ZTR5 3102 aa8.51□□□□□ -1.05
PTPN13-204ENST00000436978 PP632Q6XCG6 107 aa8.48□□□□□ -1.05
PTPN13-204ENST00000436978 ZANQ9Y493 2812 aa8.46□□□□□ -1.06
PTPN13-204ENST00000436978 KRTAP16-1A8MUX0 517 aa8.46□□□□□ -1.06
PTPN13-204ENST00000436978 TENM4Q6N022 2769 aa8.45□□□□□ -1.06
PTPN13-204ENST00000436978 DCHS2Q6V1P9 2916 aa8.44□□□□□ -1.06
PTPN13-204ENST00000436978 TENM1Q9UKZ4 2725 aa8.43□□□□□ -1.06
PTPN13-204ENST00000436978 WDFY3Q8IZQ1 3526 aa8.43□□□□□ -1.06
PTPN13-204ENST00000436978 MYO15AQ9UKN7 3530 aa8.42□□□□□ -1.06
PTPN13-204ENST00000436978 NF1P21359 2839 aa8.4□□□□□ -1.06
PTPN13-204ENST00000436978 NBPF19A0A087WUL8 3843 aa8.39□□□□□ -1.07
PTPN13-204ENST00000436978 C10orf95Q9H7T3 257 aa8.36□□□□□ -1.07
PTPN13-204ENST00000436978 KRTAP10-8P60410 259 aa8.35□□□□□ -1.07
PTPN13-204ENST00000436978 PRO2289Q9P1D8 64 aa8.34□□□□□ -1.08
PTPN13-204ENST00000436978 CELSR1Q9NYQ6 3014 aa8.33□□□□□ -1.08
PTPN13-204ENST00000436978 FBN2P35556 2912 aa8.33□□□□□ -1.08
PTPN13-204ENST00000436978 KRTAP13-3Q3SY46 172 aa8.27□□□□□ -1.09
PTPN13-204ENST00000436978 ASPMQ8IZT6 3477 aa8.27□□□□□ -1.09
PTPN13-204ENST00000436978 A0A1B0GVY2 172 aa8.26□□□□□ -1.09
PTPN13-204ENST00000436978 LOC400499M0QZD8 3231 aa8.26□□□□□ -1.09
PTPN13-204ENST00000436978 NDUFAF8A1L188 74 aa8.26□□□□□ -1.09
PTPN13-204ENST00000436978 KRTAP10-10P60014 251 aa8.23□□□□□ -1.09
PTPN13-204ENST00000436978 H0YAA0 97 aa8.21□□□□□ -1.1
PTPN13-204ENST00000436978 DCHS1Q96JQ0 3298 aa8.16□□□□□ -1.1
PTPN13-204ENST00000436978 MXRA5Q9NR99 2828 aa8.15□□□□□ -1.1
PTPN13-204ENST00000436978 TENM3Q9P273 2699 aa8.14□□□□□ -1.11
PTPN13-204ENST00000436978 TGP01266 2768 aa8.12□□□□□ -1.11
PTPN13-204ENST00000436978 LAMA5O15230 3695 aa8.1□□□□□ -1.11
PTPN13-204ENST00000436978 P0C880 135 aa8.04□□□□□ -1.12
PTPN13-204ENST00000436978 TENM2Q9NT68 2774 aa7.96□□□□□ -1.13
PTPN13-204ENST00000436978 CSMD1Q96PZ7 3565 aa7.95□□□□□ -1.14
PTPN13-204ENST00000436978 RELNP78509 3460 aa7.93□□□□□ -1.14
PTPN13-204ENST00000436978 PDZD2O15018 2839 aa7.9□□□□□ -1.14
PTPN13-204ENST00000436978 SPENQ96T58 3664 aaKnown RBP7.88□□□□□ -1.15
PTPN13-204ENST00000436978 DMDP11532 3685 aa7.88□□□□□ -1.15
PTPN13-204ENST00000436978 ZFHX4Q86UP3 3567 aa7.88□□□□□ -1.15
PTPN13-204ENST00000436978 PKD1L1Q8TDX9 2849 aa7.85□□□□□ -1.15
PTPN13-204ENST00000436978 VWFP04275 2813 aa7.83□□□□□ -1.16
PTPN13-204ENST00000436978 ZFHX3Q15911 3703 aa7.82□□□□□ -1.16
PTPN13-204ENST00000436978 KRTAP13-4Q3LI77 160 aa7.75□□□□□ -1.17
PTPN13-204ENST00000436978 KRTAP12-2P59991 146 aa7.74□□□□□ -1.17
PTPN13-204ENST00000436978 SMG1Q96Q15 3661 aaKnown RBP7.73□□□□□ -1.17
PTPN13-204ENST00000436978 BSNQ9UPA5 3926 aa7.71□□□□□ -1.17
PTPN13-204ENST00000436978 TRRAPQ9Y4A5 3859 aa7.61□□□□□ -1.19
PTPN13-204ENST00000436978 ANK3Q12955 4377 aaKnown RBP7.6□□□□□ -1.19
PTPN13-204ENST00000436978 KRTAP12-1P59990 96 aa7.6□□□□□ -1.19
PTPN13-204ENST00000436978 VPS13CQ709C8 3753 aa7.57□□□□□ -1.2
PTPN13-204ENST00000436978 ALMS1Q8TCU4 4167 aa7.56□□□□□ -1.2
PTPN13-204ENST00000436978 OTOGQ6ZRI0 2925 aa7.55□□□□□ -1.2
PTPN13-204ENST00000436978 AKAP9Q99996 3911 aa7.52□□□□□ -1.21
PTPN13-204ENST00000436978 SVEP1Q4LDE5 3571 aa7.52□□□□□ -1.21
PTPN13-204ENST00000436978 FBN1P35555 2871 aaKnown RBP7.51□□□□□ -1.21
PTPN13-204ENST00000436978 KRTAP3-1Q9BYR8 98 aa7.48□□□□□ -1.21
PTPN13-204ENST00000436978 MEGF8Q7Z7M0 2845 aa7.44□□□□□ -1.22
PTPN13-204ENST00000436978 COL7A1Q02388 2944 aa7.41□□□□□ -1.22
PTPN13-204ENST00000436978 KRTAP15-1Q3LI76 137 aa7.41□□□□□ -1.22
PTPN13-204ENST00000436978 FBN3Q75N90 2809 aa7.4□□□□□ -1.23
PTPN13-204ENST00000436978 HUWE1Q7Z6Z7 4374 aaKnown RBP7.31□□□□□ -1.24
PTPN13-204ENST00000436978 KRTAP10-6P60371 365 aaPredicted RBP7.3□□□□□ -1.24
PTPN13-204ENST00000436978 MT1HL1P0DM35 61 aa7.28□□□□□ -1.24
PTPN13-204ENST00000436978 CUBNO60494 3623 aa7.26□□□□□ -1.25
PTPN13-204ENST00000436978 MUC3AQ02505 3323 aa7.26□□□□□ -1.25
PTPN13-204ENST00000436978 CSMD2Q7Z408 3487 aa7.23□□□□□ -1.25
PTPN13-204ENST00000436978 KRTAP10-12P60413 245 aa7.16□□□□□ -1.26
PTPN13-204ENST00000436978 SRRM2Q9UQ35 2752 aaKnown RBP7.16□□□□□ -1.26
PTPN13-204ENST00000436978 KRTAP10-4P60372 401 aaPredicted RBP7.08□□□□□ -1.28
PTPN13-204ENST00000436978 ZNF469Q96JG9 3925 aaPredicted RBP7.07□□□□□ -1.28
PTPN13-204ENST00000436978 KRTAP3-3Q9BYR6 98 aa7.07□□□□□ -1.28
PTPN13-204ENST00000436978 KRTAP3-2Q9BYR7 98 aa7.02□□□□□ -1.29
PTPN13-204ENST00000436978 DNAH1Q9P2D7 4330 aa7.01□□□□□ -1.29
PTPN13-204ENST00000436978 DNAH3Q8TD57 4116 aa7.01□□□□□ -1.29
PTPN13-204ENST00000436978 INE1O15225 51 aa7.01□□□□□ -1.29
PTPN13-204ENST00000436978 KRTAP23-1A1A580 65 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 153.2 ms