RNA–Protein interactions for RNA: ENST00000431893.3

SEC16A-206, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC16A, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-206ENST00000431893 TEP1Q99973 2627 aaKnown RBP5.94□□□□□ -1.46
SEC16A-206ENST00000431893 NOTCH1P46531 2555 aa5.93□□□□□ -1.46
SEC16A-206ENST00000431893 KRTAP1-4P0C5Y4 121 aa5.93□□□□□ -1.46
SEC16A-206ENST00000431893 IGSF10Q6WRI0 2623 aa5.93□□□□□ -1.46
SEC16A-206ENST00000431893 LRBAP50851 2863 aa5.88□□□□□ -1.47
SEC16A-206ENST00000431893 DSPP15924 2871 aaKnown RBP5.88□□□□□ -1.47
SEC16A-206ENST00000431893 APCP25054 2843 aa5.88□□□□□ -1.47
SEC16A-206ENST00000431893 CRYBG3Q68DQ2 2970 aa5.84□□□□□ -1.47
SEC16A-206ENST00000431893 MAP1AP78559 2803 aaPredicted RBP5.83□□□□□ -1.48
SEC16A-206ENST00000431893 LAMA1P25391 3075 aa5.83□□□□□ -1.48
SEC16A-206ENST00000431893 SPEGQ15772 3267 aa5.83□□□□□ -1.48
SEC16A-206ENST00000431893 ASH1LQ9NR48 2969 aaKnown RBP5.83□□□□□ -1.48
SEC16A-206ENST00000431893 KRTAP12-2P59991 146 aa5.82□□□□□ -1.48
SEC16A-206ENST00000431893 DMXL2Q8TDJ6 3036 aa5.82□□□□□ -1.48
SEC16A-206ENST00000431893 SPTBN5Q9NRC6 3674 aaKnown RBP5.8□□□□□ -1.48
SEC16A-206ENST00000431893 ITPR2Q14571 2701 aa5.78□□□□□ -1.48
SEC16A-206ENST00000431893 PRO2289Q9P1D8 64 aa5.78□□□□□ -1.48
SEC16A-206ENST00000431893 NSD1Q96L73 2696 aaPredicted RBP5.77□□□□□ -1.49
SEC16A-206ENST00000431893 HIVEP1P15822 2718 aa5.76□□□□□ -1.49
SEC16A-206ENST00000431893 BOD1L1Q8NFC6 3051 aa5.74□□□□□ -1.49
SEC16A-206ENST00000431893 UBR5O95071 2799 aaPredicted RBP5.74□□□□□ -1.49
SEC16A-206ENST00000431893 TPRXLQ17RH7 258 aa5.74□□□□□ -1.49
SEC16A-206ENST00000431893 ITPR1Q14643 2758 aa5.72□□□□□ -1.49
SEC16A-206ENST00000431893 UTP20O75691 2785 aaKnown RBP5.72□□□□□ -1.49
SEC16A-206ENST00000431893 KRTAP13-3Q3SY46 172 aa5.72□□□□□ -1.49
SEC16A-206ENST00000431893 USP34Q70CQ2 3546 aa5.71□□□□□ -1.5
SEC16A-206ENST00000431893 FRYLO94915 3013 aa5.7□□□□□ -1.5
SEC16A-206ENST00000431893 TACC2O95359 2948 aa5.7□□□□□ -1.5
SEC16A-206ENST00000431893 NBEAQ8NFP9 2946 aa5.69□□□□□ -1.5
SEC16A-206ENST00000431893 ZZEF1O43149 2961 aa5.67□□□□□ -1.5
SEC16A-206ENST00000431893 ATMQ13315 3056 aa5.67□□□□□ -1.5
SEC16A-206ENST00000431893 COL12A1Q99715 3063 aa5.66□□□□□ -1.5
SEC16A-206ENST00000431893 ADGRG4Q8IZF6 3080 aa5.65□□□□□ -1.5
SEC16A-206ENST00000431893 DCHS1Q96JQ0 3298 aa5.62□□□□□ -1.51
SEC16A-206ENST00000431893 MYO15AQ9UKN7 3530 aa5.62□□□□□ -1.51
SEC16A-206ENST00000431893 KMT2BQ9UMN6 2715 aaPredicted RBP5.61□□□□□ -1.51
SEC16A-206ENST00000431893 EYSQ5T1H1 3165 aa5.61□□□□□ -1.51
SEC16A-206ENST00000431893 KRTAP12-1P59990 96 aa5.58□□□□□ -1.52
SEC16A-206ENST00000431893 KRTAP13-4Q3LI77 160 aa5.58□□□□□ -1.52
SEC16A-206ENST00000431893 ASPMQ8IZT6 3477 aa5.57□□□□□ -1.52
SEC16A-206ENST00000431893 WDFY3Q8IZQ1 3526 aa5.54□□□□□ -1.52
SEC16A-206ENST00000431893 KRTAP15-1Q3LI76 137 aa5.54□□□□□ -1.52
SEC16A-206ENST00000431893 DMXL1Q9Y485 3027 aa5.53□□□□□ -1.52
SEC16A-206ENST00000431893 LOC400499M0QZD8 3231 aa5.51□□□□□ -1.53
SEC16A-206ENST00000431893 CELSR2Q9HCU4 2923 aa5.5□□□□□ -1.53
SEC16A-206ENST00000431893 FLNCQ14315 2725 aa5.49□□□□□ -1.53
SEC16A-206ENST00000431893 CSMD1Q96PZ7 3565 aa5.46□□□□□ -1.53
SEC16A-206ENST00000431893 TENM4Q6N022 2769 aa5.46□□□□□ -1.54
SEC16A-206ENST00000431893 CRCT1Q9UGL9 99 aa5.45□□□□□ -1.54
SEC16A-206ENST00000431893 KRTAP3-1Q9BYR8 98 aa5.45□□□□□ -1.54
SEC16A-206ENST00000431893 TGP01266 2768 aa5.45□□□□□ -1.54
SEC16A-206ENST00000431893 ZFHX4Q86UP3 3567 aa5.42□□□□□ -1.54
SEC16A-206ENST00000431893 DCHS2Q6V1P9 2916 aa5.4□□□□□ -1.54
SEC16A-206ENST00000431893 LAMA5O15230 3695 aa5.33□□□□□ -1.56
SEC16A-206ENST00000431893 CELSR1Q9NYQ6 3014 aa5.33□□□□□ -1.56
SEC16A-206ENST00000431893 NBPF19A0A087WUL8 3843 aa5.31□□□□□ -1.56
SEC16A-206ENST00000431893 HRNRQ86YZ3 2850 aaPredicted RBP5.31□□□□□ -1.56
SEC16A-206ENST00000431893 TENM2Q9NT68 2774 aa5.3□□□□□ -1.56
SEC16A-206ENST00000431893 RELNP78509 3460 aa5.3□□□□□ -1.56
SEC16A-206ENST00000431893 KRTAP10-6P60371 365 aaPredicted RBP5.29□□□□□ -1.56
SEC16A-206ENST00000431893 FBN2P35556 2912 aa5.29□□□□□ -1.56
SEC16A-206ENST00000431893 NF1P21359 2839 aa5.28□□□□□ -1.56
SEC16A-206ENST00000431893 TENM1Q9UKZ4 2725 aa5.28□□□□□ -1.56
SEC16A-206ENST00000431893 ZANQ9Y493 2812 aa5.22□□□□□ -1.57
SEC16A-206ENST00000431893 NIPBLQ6KC79 2804 aaeCLIP5.21□□□□□ -1.58
SEC16A-206ENST00000431893 SMG1Q96Q15 3661 aaKnown RBP5.17□□□□□ -1.58
SEC16A-206ENST00000431893 INE1O15225 51 aa5.16□□□□□ -1.58
SEC16A-206ENST00000431893 DMDP11532 3685 aa5.15□□□□□ -1.59
SEC16A-206ENST00000431893 KRTAP10-12P60413 245 aa5.14□□□□□ -1.59
SEC16A-206ENST00000431893 TENM3Q9P273 2699 aa5.14□□□□□ -1.59
SEC16A-206ENST00000431893 SVEP1Q4LDE5 3571 aa5.11□□□□□ -1.59
SEC16A-206ENST00000431893 MXRA5Q9NR99 2828 aa5.11□□□□□ -1.59
SEC16A-206ENST00000431893 VWFP04275 2813 aa5.07□□□□□ -1.6
SEC16A-206ENST00000431893 SPENQ96T58 3664 aaKnown RBP5.07□□□□□ -1.6
SEC16A-206ENST00000431893 PDZD2O15018 2839 aa5.07□□□□□ -1.6
SEC16A-206ENST00000431893 KRTAP3-2Q9BYR7 98 aa5.07□□□□□ -1.6
SEC16A-206ENST00000431893 KRTAP3-3Q9BYR6 98 aa5.06□□□□□ -1.6
SEC16A-206ENST00000431893 MUC3AQ02505 3323 aa5.04□□□□□ -1.6
SEC16A-206ENST00000431893 LCE3AQ5TA76 89 aa5.04□□□□□ -1.6
SEC16A-206ENST00000431893 CUBNO60494 3623 aa5.03□□□□□ -1.6
SEC16A-206ENST00000431893 PKD1L1Q8TDX9 2849 aa5.02□□□□□ -1.61
SEC16A-206ENST00000431893 ZFHX3Q15911 3703 aa5.02□□□□□ -1.61
SEC16A-206ENST00000431893 KRTAP12-3P60328 96 aa4.99□□□□□ -1.61
SEC16A-206ENST00000431893 ANK3Q12955 4377 aaKnown RBP4.99□□□□□ -1.61
SEC16A-206ENST00000431893 OTOGQ6ZRI0 2925 aa4.97□□□□□ -1.61
SEC16A-206ENST00000431893 KRTAP10-5P60370 271 aa4.95□□□□□ -1.62
SEC16A-206ENST00000431893 LORP23490 312 aaPredicted RBP4.92□□□□□ -1.62
SEC16A-206ENST00000431893 MT1HL1P0DM35 61 aa4.92□□□□□ -1.62
SEC16A-206ENST00000431893 KRTAP4-5Q9BYR2 181 aa4.9□□□□□ -1.62
SEC16A-206ENST00000431893 CSMD2Q7Z408 3487 aa4.89□□□□□ -1.63
SEC16A-206ENST00000431893 FBN1P35555 2871 aaKnown RBP4.87□□□□□ -1.63
SEC16A-206ENST00000431893 HUWE1Q7Z6Z7 4374 aaKnown RBP4.86□□□□□ -1.63
SEC16A-206ENST00000431893 MEGF8Q7Z7M0 2845 aa4.85□□□□□ -1.63
SEC16A-206ENST00000431893 FBN3Q75N90 2809 aa4.81□□□□□ -1.64
SEC16A-206ENST00000431893 BSNQ9UPA5 3926 aa4.8□□□□□ -1.64
SEC16A-206ENST00000431893 TRRAPQ9Y4A5 3859 aa4.8□□□□□ -1.64
SEC16A-206ENST00000431893 VPS13CQ709C8 3753 aa4.79□□□□□ -1.64
SEC16A-206ENST00000431893 CSMD3Q7Z407 3707 aa4.79□□□□□ -1.64
SEC16A-206ENST00000431893 SRRM2Q9UQ35 2752 aaKnown RBP4.78□□□□□ -1.64
SEC16A-206ENST00000431893 KRTAP8-1Q8IUC2 63 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms