RNA–Protein interactions for RNA: ENST00000430249.6

CPS1-203, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 1 (best) BASIC

Gene CPS1, Length 5,698 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-203ENST00000430249 MT1HL1P0DM35 61 aa3.22□□□□□ -1.89
CPS1-203ENST00000430249 HUWE1Q7Z6Z7 4374 aaKnown RBP3.21□□□□□ -1.9
CPS1-203ENST00000430249 ITPR1Q14643 2758 aa3.21□□□□□ -1.9
CPS1-203ENST00000430249 APCP25054 2843 aa3.19□□□□□ -1.9
CPS1-203ENST00000430249 UTP20O75691 2785 aaKnown RBP3.19□□□□□ -1.9
CPS1-203ENST00000430249 KRTAP10-4P60372 401 aaPredicted RBP3.17□□□□□ -1.9
CPS1-203ENST00000430249 KRTAP3-2Q9BYR7 98 aa3.17□□□□□ -1.9
CPS1-203ENST00000430249 NIPBLQ6KC79 2804 aaeCLIP3.17□□□□□ -1.9
CPS1-203ENST00000430249 KRTAP10-12P60413 245 aa3.16□□□□□ -1.9
CPS1-203ENST00000430249 KRTAP3-3Q9BYR6 98 aa3.15□□□□□ -1.9
CPS1-203ENST00000430249 DSPP15924 2871 aaKnown RBP3.14□□□□□ -1.91
CPS1-203ENST00000430249 LAMA2P24043 3122 aaKnown RBP3.13□□□□□ -1.91
CPS1-203ENST00000430249 NBEAQ8NFP9 2946 aa3.13□□□□□ -1.91
CPS1-203ENST00000430249 MKI67P46013 3256 aaKnown RBP3.12□□□□□ -1.91
CPS1-203ENST00000430249 TRIOO75962 3097 aa3.12□□□□□ -1.91
CPS1-203ENST00000430249 FRYQ5TBA9 3013 aa3.11□□□□□ -1.91
CPS1-203ENST00000430249 TENM4Q6N022 2769 aa3.11□□□□□ -1.91
CPS1-203ENST00000430249 UNC80Q8N2C7 3258 aa3.11□□□□□ -1.91
CPS1-203ENST00000430249 LRBAP50851 2863 aa3.1□□□□□ -1.91
CPS1-203ENST00000430249 ZZEF1O43149 2961 aa3.1□□□□□ -1.91
CPS1-203ENST00000430249 HRNRQ86YZ3 2850 aaPredicted RBP3.09□□□□□ -1.92
CPS1-203ENST00000430249 ANK3Q12955 4377 aaKnown RBP3.07□□□□□ -1.92
CPS1-203ENST00000430249 KALRNO60229 2985 aa3.07□□□□□ -1.92
CPS1-203ENST00000430249 FLNCQ14315 2725 aa3.07□□□□□ -1.92
CPS1-203ENST00000430249 EYSQ5T1H1 3165 aa3.07□□□□□ -1.92
CPS1-203ENST00000430249 RANBP2P49792 3224 aaKnown RBP3.06□□□□□ -1.92
CPS1-203ENST00000430249 KRTAP12-3P60328 96 aa3.05□□□□□ -1.92
CPS1-203ENST00000430249 DNAH14Q0VDD8 3507 aa3.04□□□□□ -1.92
CPS1-203ENST00000430249 BRCA2P51587 3418 aa3.04□□□□□ -1.92
CPS1-203ENST00000430249 LAMA3Q16787 3333 aa3.03□□□□□ -1.92
CPS1-203ENST00000430249 DNAH2Q9P225 4427 aa3.02□□□□□ -1.93
CPS1-203ENST00000430249 TNRC18O15417 2968 aaPredicted RBP3.01□□□□□ -1.93
CPS1-203ENST00000430249 VPS13AQ96RL7 3174 aa3.01□□□□□ -1.93
CPS1-203ENST00000430249 PDZD2O15018 2839 aa3□□□□□ -1.93
CPS1-203ENST00000430249 TGP01266 2768 aa3□□□□□ -1.93
CPS1-203ENST00000430249 FREM2Q5SZK8 3169 aa2.99□□□□□ -1.93
CPS1-203ENST00000430249 ATMQ13315 3056 aa2.99□□□□□ -1.93
CPS1-203ENST00000430249 WDFY4Q6ZS81 3184 aa2.98□□□□□ -1.93
CPS1-203ENST00000430249 KRTAP19-4Q3LI73 84 aa2.98□□□□□ -1.93
CPS1-203ENST00000430249 PRUNE2Q8WUY3 3088 aa2.98□□□□□ -1.93
CPS1-203ENST00000430249 LCE3AQ5TA76 89 aa2.97□□□□□ -1.93
CPS1-203ENST00000430249 CELSR3Q9NYQ7 3312 aa2.97□□□□□ -1.93
CPS1-203ENST00000430249 TENM2Q9NT68 2774 aa2.97□□□□□ -1.93
CPS1-203ENST00000430249 TACC2O95359 2948 aa2.95□□□□□ -1.94
CPS1-203ENST00000430249 VCANP13611 3396 aa2.95□□□□□ -1.94
CPS1-203ENST00000430249 COL12A1Q99715 3063 aa2.94□□□□□ -1.94
CPS1-203ENST00000430249 ADGRG4Q8IZF6 3080 aa2.94□□□□□ -1.94
CPS1-203ENST00000430249 FRYLO94915 3013 aa2.93□□□□□ -1.94
CPS1-203ENST00000430249 CDH23Q9H251 3354 aa2.92□□□□□ -1.94
CPS1-203ENST00000430249 FBN2P35556 2912 aa2.92□□□□□ -1.94
CPS1-203ENST00000430249 KRTAP4-5Q9BYR2 181 aa2.91□□□□□ -1.94
CPS1-203ENST00000430249 XIRP2A4UGR9 3374 aa2.9□□□□□ -1.95
CPS1-203ENST00000430249 SZT2Q5T011 3432 aa2.9□□□□□ -1.95
CPS1-203ENST00000430249 REV3LO60673 3130 aa2.9□□□□□ -1.95
CPS1-203ENST00000430249 COL6A3P12111 3177 aa2.89□□□□□ -1.95
CPS1-203ENST00000430249 DNAH10Q8IVF4 4471 aa2.89□□□□□ -1.95
CPS1-203ENST00000430249 KRTAP8-1Q8IUC2 63 aa2.88□□□□□ -1.95
CPS1-203ENST00000430249 DCHS2Q6V1P9 2916 aa2.88□□□□□ -1.95
CPS1-203ENST00000430249 DNAH1Q9P2D7 4330 aa2.88□□□□□ -1.95
CPS1-203ENST00000430249 DMXL2Q8TDJ6 3036 aa2.88□□□□□ -1.95
CPS1-203ENST00000430249 TENM3Q9P273 2699 aa2.87□□□□□ -1.95
CPS1-203ENST00000430249 SPRR2GQ9BYE4 73 aa2.87□□□□□ -1.95
CPS1-203ENST00000430249 MXRA5Q9NR99 2828 aa2.87□□□□□ -1.95
CPS1-203ENST00000430249 ASH1LQ9NR48 2969 aaKnown RBP2.86□□□□□ -1.95
CPS1-203ENST00000430249 ZFHX3Q15911 3703 aa2.86□□□□□ -1.95
CPS1-203ENST00000430249 TENM1Q9UKZ4 2725 aa2.85□□□□□ -1.95
CPS1-203ENST00000430249 NF1P21359 2839 aa2.85□□□□□ -1.95
CPS1-203ENST00000430249 BOD1L1Q8NFC6 3051 aa2.84□□□□□ -1.95
CPS1-203ENST00000430249 CELSR2Q9HCU4 2923 aa2.84□□□□□ -1.95
CPS1-203ENST00000430249 ZANQ9Y493 2812 aa2.84□□□□□ -1.95
CPS1-203ENST00000430249 LORP23490 312 aaPredicted RBP2.84□□□□□ -1.95
CPS1-203ENST00000430249 CRCT1Q9UGL9 99 aa2.83□□□□□ -1.96
CPS1-203ENST00000430249 USP34Q70CQ2 3546 aa2.83□□□□□ -1.96
CPS1-203ENST00000430249 CELSR1Q9NYQ6 3014 aa2.83□□□□□ -1.96
CPS1-203ENST00000430249 MT1HP80294 61 aa2.83□□□□□ -1.96
CPS1-203ENST00000430249 CRYBG3Q68DQ2 2970 aa2.82□□□□□ -1.96
CPS1-203ENST00000430249 SPTBN5Q9NRC6 3674 aaKnown RBP2.81□□□□□ -1.96
CPS1-203ENST00000430249 DYNC1H1Q14204 4646 aaKnown RBP2.8□□□□□ -1.96
CPS1-203ENST00000430249 DNAH11Q96DT5 4516 aa2.79□□□□□ -1.96
CPS1-203ENST00000430249 OTOGQ6ZRI0 2925 aa2.79□□□□□ -1.96
CPS1-203ENST00000430249 DMXL1Q9Y485 3027 aa2.78□□□□□ -1.96
CPS1-203ENST00000430249 SPEGQ15772 3267 aa2.78□□□□□ -1.96
CPS1-203ENST00000430249 MT2AP02795 61 aa2.78□□□□□ -1.96
CPS1-203ENST00000430249 DNAH9Q9NYC9 4486 aa2.78□□□□□ -1.96
CPS1-203ENST00000430249 DNAH6Q9C0G6 4158 aa2.78□□□□□ -1.96
CPS1-203ENST00000430249 DCHS1Q96JQ0 3298 aa2.78□□□□□ -1.97
CPS1-203ENST00000430249 CFAP47Q6ZTR5 3102 aa2.76□□□□□ -1.97
CPS1-203ENST00000430249 DNAH17Q9UFH2 4485 aa2.76□□□□□ -1.97
CPS1-203ENST00000430249 KRTAP4-1Q9BYQ7 146 aa2.74□□□□□ -1.97
CPS1-203ENST00000430249 HERC1Q15751 4861 aa2.74□□□□□ -1.97
CPS1-203ENST00000430249 KRTAP10-5P60370 271 aa2.74□□□□□ -1.97
CPS1-203ENST00000430249 DNAH3Q8TD57 4116 aa2.73□□□□□ -1.97
CPS1-203ENST00000430249 VPS13DQ5THJ4 4388 aa2.72□□□□□ -1.97
CPS1-203ENST00000430249 CSMD1Q96PZ7 3565 aa2.71□□□□□ -1.98
CPS1-203ENST00000430249 ZFHX4Q86UP3 3567 aa2.71□□□□□ -1.98
CPS1-203ENST00000430249 LOC400499M0QZD8 3231 aa2.71□□□□□ -1.98
CPS1-203ENST00000430249 LCE3CQ5T5A8 94 aa2.7□□□□□ -1.98
CPS1-203ENST00000430249 HSPG2P98160 4391 aa2.7□□□□□ -1.98
CPS1-203ENST00000430249 WDFY3Q8IZQ1 3526 aa2.7□□□□□ -1.98
CPS1-203ENST00000430249 MYCBP2O75592 4640 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 1100 ms