RNA–Protein interactions for RNA: ENST00000429762.7

VSX1-205, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-205ENST00000429762 SPAG11AQ6PDA7 123 aa12.56□□□□□ -0.4
VSX1-205ENST00000429762 TNXBP22105 4242 aa12.55□□□□□ -0.4
VSX1-205ENST00000429762 CASC2Q6XLA1 102 aa12.54□□□□□ -0.4
VSX1-205ENST00000429762 FLG2Q5D862 2391 aaPredicted RBP12.54□□□□□ -0.4
VSX1-205ENST00000429762 C8orf17Q9NRJ1 99 aa12.54□□□□□ -0.4
VSX1-205ENST00000429762 KRTAP29-1A8MX34 341 aaPredicted RBP12.53□□□□□ -0.4
VSX1-205ENST00000429762 SERP2Q8N6R1 65 aa12.53□□□□□ -0.4
VSX1-205ENST00000429762 KRTAP4-5Q9BYR2 181 aa12.52□□□□□ -0.41
VSX1-205ENST00000429762 KRTAP10-8P60410 259 aa12.5□□□□□ -0.41
VSX1-205ENST00000429762 COX7CP15954 63 aa12.5□□□□□ -0.41
VSX1-205ENST00000429762 RPS29P62273 56 aaKnown RBP12.49□□□□□ -0.41
VSX1-205ENST00000429762 TRAV7A0A075B6U4 112 aa12.49□□□□□ -0.41
VSX1-205ENST00000429762 OCR1Q9BZK8 76 aa12.49□□□□□ -0.41
VSX1-205ENST00000429762 BIRC6Q9NR09 4857 aa12.48□□□□□ -0.41
VSX1-205ENST00000429762 hDV103S1A0JD37 113 aa12.48□□□□□ -0.41
VSX1-205ENST00000429762 MYCBP2O75592 4640 aa12.47□□□□□ -0.41
VSX1-205ENST00000429762 SMIM20Q8N5G0 67 aa12.44□□□□□ -0.42
VSX1-205ENST00000429762 RETNLBQ9BQ08 111 aa12.44□□□□□ -0.42
VSX1-205ENST00000429762 UQCRQO14949 82 aa12.43□□□□□ -0.42
VSX1-205ENST00000429762 MT1HL1P0DM35 61 aa12.38□□□□□ -0.43
VSX1-205ENST00000429762 LINC00313P59037 77 aa12.37□□□□□ -0.43
VSX1-205ENST00000429762 C8orf87E5RJ46 101 aa12.36□□□□□ -0.43
VSX1-205ENST00000429762 C20orf197Q8N268 126 aa12.36□□□□□ -0.43
VSX1-205ENST00000429762 MRPL34Q9BQ48 92 aaKnown RBP12.36□□□□□ -0.43
VSX1-205ENST00000429762 TMEM254Q8TBM7 123 aa12.35□□□□□ -0.43
VSX1-205ENST00000429762 CYSTM1Q9H1C7 97 aa12.35□□□□□ -0.43
VSX1-205ENST00000429762 NDUFS5O43920 106 aa12.34□□□□□ -0.43
VSX1-205ENST00000429762 ABCA13Q86UQ4 5058 aa12.33□□□□□ -0.43
VSX1-205ENST00000429762 HERC2O95714 4834 aa12.33□□□□□ -0.44
VSX1-205ENST00000429762 SNURFQ9Y675 71 aa12.31□□□□□ -0.44
VSX1-205ENST00000429762 KRTAP16-1A8MUX0 517 aa12.27□□□□□ -0.44
VSX1-205ENST00000429762 DMBT1Q9UGM3 2413 aaPredicted RBP12.26□□□□□ -0.45
VSX1-205ENST00000429762 C9orf92A6NGG3 77 aa12.25□□□□□ -0.45
VSX1-205ENST00000429762 OXTP01178 125 aa12.22□□□□□ -0.45
VSX1-205ENST00000429762 A0A0U1RQV1 116 aa12.21□□□□□ -0.46
VSX1-205ENST00000429762 H0Y9P7 68 aa12.21□□□□□ -0.46
VSX1-205ENST00000429762 C5orf47Q569G3 176 aa12.19□□□□□ -0.46
VSX1-205ENST00000429762 TP53AIP1Q9HCN2 124 aa12.18□□□□□ -0.46
VSX1-205ENST00000429762 KLKP1Q107X0 134 aa12.18□□□□□ -0.46
VSX1-205ENST00000429762 Q8N9P0 234 aaPredicted RBP12.17□□□□□ -0.46
VSX1-205ENST00000429762 TRAV22A0A0B4J277 110 aa12.16□□□□□ -0.46
VSX1-205ENST00000429762 Q5W150 140 aa12.15□□□□□ -0.46
VSX1-205ENST00000429762 MP68P56378 58 aa12.14□□□□□ -0.47
VSX1-205ENST00000429762 LINC00208Q96KT6 92 aa12.14□□□□□ -0.47
VSX1-205ENST00000429762 ZCCHC13Q8WW36 166 aaKnown RBP12.1□□□□□ -0.47
VSX1-205ENST00000429762 H7BZZ5 65 aa12.07□□□□□ -0.48
VSX1-205ENST00000429762 C1orf64Q8NEQ6 169 aa12.07□□□□□ -0.48
VSX1-205ENST00000429762 IGLV7-46A0A075B6I9 117 aa12.06□□□□□ -0.48
VSX1-205ENST00000429762 KRTAP13-3Q3SY46 172 aa12.06□□□□□ -0.48
VSX1-205ENST00000429762 FP248Q71RG6 208 aaPredicted RBP12.06□□□□□ -0.48
VSX1-205ENST00000429762 PRR4Q16378 134 aa12.03□□□□□ -0.48
VSX1-205ENST00000429762 J3QL48 77 aa12.01□□□□□ -0.49
VSX1-205ENST00000429762 H3BPC8 53 aa12□□□□□ -0.49
VSX1-205ENST00000429762 C20orf166-AS1Q96NR2 134 aa11.98□□□□□ -0.49
VSX1-205ENST00000429762 A8MUU9 505 aa11.97□□□□□ -0.49
VSX1-205ENST00000429762 NDUFC1O43677 76 aa11.97□□□□□ -0.49
VSX1-205ENST00000429762 TMEM258P61165 79 aa11.96□□□□□ -0.5
VSX1-205ENST00000429762 PCOTHQ58A44 107 aa11.94□□□□□ -0.5
VSX1-205ENST00000429762 FAM236DA0A1B0GTK5 79 aa11.89□□□□□ -0.51
VSX1-205ENST00000429762 FAM236CP0DP71 79 aa11.89□□□□□ -0.51
VSX1-205ENST00000429762 LOC101927531A0A1B0GV80 90 aa11.88□□□□□ -0.51
VSX1-205ENST00000429762 XP32Q5T750 250 aa11.88□□□□□ -0.51
VSX1-205ENST00000429762 PCLOQ9Y6V0 5065 aa11.87□□□□□ -0.51
VSX1-205ENST00000429762 IGKV2D-30A0A075B6S6 120 aa11.86□□□□□ -0.51
VSX1-205ENST00000429762 IGKV2-30P06310 120 aa11.86□□□□□ -0.51
VSX1-205ENST00000429762 Q75L30 129 aa11.86□□□□□ -0.51
VSX1-205ENST00000429762 CYP4F30PQ9H0H9 118 aa11.86□□□□□ -0.51
VSX1-205ENST00000429762 LPAP08519 4548 aa11.8□□□□□ -0.52
VSX1-205ENST00000429762 RPL37P61927 97 aaKnown RBP11.78□□□□□ -0.52
VSX1-205ENST00000429762 TPRXLQ17RH7 258 aa11.76□□□□□ -0.53
VSX1-205ENST00000429762 ATP11AUNQ6ZP68 121 aa11.72□□□□□ -0.53
VSX1-205ENST00000429762 ATP5EP56381 51 aaPredicted RBP11.71□□□□□ -0.53
VSX1-205ENST00000429762 HRES1P13985 223 aa11.7□□□□□ -0.54
VSX1-205ENST00000429762 C7orf65Q6ZTY9 151 aa11.7□□□□□ -0.54
VSX1-205ENST00000429762 SPANXA2-OT1Q8N9U9 137 aa11.69□□□□□ -0.54
VSX1-205ENST00000429762 LRP2P98164 4655 aa11.68□□□□□ -0.54
VSX1-205ENST00000429762 SPINK7P58062 85 aa11.64□□□□□ -0.55
VSX1-205ENST00000429762 HERC1Q15751 4861 aa11.6□□□□□ -0.55
VSX1-205ENST00000429762 SERP1Q9Y6X1 66 aa11.6□□□□□ -0.55
VSX1-205ENST00000429762 C4orf26Q17RF5 130 aa11.55□□□□□ -0.56
VSX1-205ENST00000429762 RPS28P62857 69 aaKnown RBP11.51□□□□□ -0.57
VSX1-205ENST00000429762 DMAC1Q96GE9 116 aa11.47□□□□□ -0.57
VSX1-205ENST00000429762 COA5Q86WW8 74 aa11.46□□□□□ -0.58
VSX1-205ENST00000429762 HMCN2Q8NDA2 5059 aa11.44□□□□□ -0.58
VSX1-205ENST00000429762 ACYP2P14621 99 aa11.39□□□□□ -0.59
VSX1-205ENST00000429762 KRTAP3-1Q9BYR8 98 aa11.37□□□□□ -0.59
VSX1-205ENST00000429762 SEC61BP60468 96 aaKnown RBP11.36□□□□□ -0.59
VSX1-205ENST00000429762 COX6B2Q6YFQ2 88 aa11.3□□□□□ -0.6
VSX1-205ENST00000429762 MUC17Q685J3 4493 aa11.29□□□□□ -0.6
VSX1-205ENST00000429762 SMIM26A0A096LP01 95 aa11.28□□□□□ -0.6
VSX1-205ENST00000429762 KRTAP4-1Q9BYQ7 146 aa11.28□□□□□ -0.6
VSX1-205ENST00000429762 CHKB-CPT1BH3BT56 60 aa11.27□□□□□ -0.61
VSX1-205ENST00000429762 A8MUN3 132 aa11.26□□□□□ -0.61
VSX1-205ENST00000429762 MPLKIPQ8TAP9 179 aa11.24□□□□□ -0.61
VSX1-205ENST00000429762 RBM12B-AS1Q9P1G2 102 aa11.1□□□□□ -0.63
VSX1-205ENST00000429762 Q1T7F1 81 aa11.05□□□□□ -0.64
VSX1-205ENST00000429762 H1FX-AS1Q4G0G2 97 aa11.03□□□□□ -0.64
VSX1-205ENST00000429762 MUC2Q02817 5179 aa11.02□□□□□ -0.65
VSX1-205ENST00000429762 LCA10Q71F78 164 aa11□□□□□ -0.65
VSX1-205ENST00000429762 PSPHP1O15172 72 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms