RNA–Protein interactions for RNA: ENST00000428457.1

TNS3-204, Transcript of tensin 3, humanhuman

TSL 1 (best)

Gene TNS3, Length 5,070 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNS3-204ENST00000428457 APCP25054 2843 aa5.93□□□□□ -1.46
TNS3-204ENST00000428457 A0A087X002 238 aa5.9□□□□□ -1.46
TNS3-204ENST00000428457 NOTCH2NLQ7Z3S9 236 aa5.9□□□□□ -1.46
TNS3-204ENST00000428457 STAB2Q8WWQ8 2551 aa5.88□□□□□ -1.47
TNS3-204ENST00000428457 SPATA8Q6RVD6 105 aa5.87□□□□□ -1.47
TNS3-204ENST00000428457 ROMO1P60602 79 aa5.87□□□□□ -1.47
TNS3-204ENST00000428457 PANO1I0J062 215 aa5.86□□□□□ -1.47
TNS3-204ENST00000428457 LINC00483Q53H64 154 aa5.86□□□□□ -1.47
TNS3-204ENST00000428457 HRNRQ86YZ3 2850 aaPredicted RBP5.86□□□□□ -1.47
TNS3-204ENST00000428457 S4R3F8 94 aa5.85□□□□□ -1.47
TNS3-204ENST00000428457 CAMK2N1Q7Z7J9 78 aa5.85□□□□□ -1.47
TNS3-204ENST00000428457 CELSR2Q9HCU4 2923 aa5.85□□□□□ -1.47
TNS3-204ENST00000428457 RPL37P61927 97 aaKnown RBP5.85□□□□□ -1.47
TNS3-204ENST00000428457 H1FX-AS1Q4G0G2 97 aa5.85□□□□□ -1.47
TNS3-204ENST00000428457 ZFHX4Q86UP3 3567 aa5.85□□□□□ -1.47
TNS3-204ENST00000428457 ASB16-AS1Q495Z4 193 aa5.84□□□□□ -1.47
TNS3-204ENST00000428457 CRYBG3Q68DQ2 2970 aa5.82□□□□□ -1.48
TNS3-204ENST00000428457 RPS29P62273 56 aaKnown RBP5.82□□□□□ -1.48
TNS3-204ENST00000428457 KRTAP11-1Q8IUC1 163 aa5.81□□□□□ -1.48
TNS3-204ENST00000428457 A0A0A0MQY5 61 aa5.8□□□□□ -1.48
TNS3-204ENST00000428457 KRTAP7-1Q8IUC3 87 aa5.8□□□□□ -1.48
TNS3-204ENST00000428457 NIPBLQ6KC79 2804 aaeCLIP5.79□□□□□ -1.48
TNS3-204ENST00000428457 RELNP78509 3460 aa5.78□□□□□ -1.48
TNS3-204ENST00000428457 DCHS2Q6V1P9 2916 aa5.78□□□□□ -1.48
TNS3-204ENST00000428457 KRTAP25-1Q3LHN0 102 aa5.77□□□□□ -1.49
TNS3-204ENST00000428457 WDFY3Q8IZQ1 3526 aa5.77□□□□□ -1.49
TNS3-204ENST00000428457 NF1P21359 2839 aa5.77□□□□□ -1.49
TNS3-204ENST00000428457 Q6ZRN7 208 aaPredicted RBP5.77□□□□□ -1.49
TNS3-204ENST00000428457 FBN2P35556 2912 aa5.76□□□□□ -1.49
TNS3-204ENST00000428457 DCHS1Q96JQ0 3298 aa5.73□□□□□ -1.49
TNS3-204ENST00000428457 TENM4Q6N022 2769 aa5.73□□□□□ -1.49
TNS3-204ENST00000428457 R4GN34 69 aa5.73□□□□□ -1.49
TNS3-204ENST00000428457 LAMA5O15230 3695 aa5.72□□□□□ -1.49
TNS3-204ENST00000428457 ASPMQ8IZT6 3477 aa5.71□□□□□ -1.5
TNS3-204ENST00000428457 KRTAP16-1A8MUX0 517 aa5.7□□□□□ -1.5
TNS3-204ENST00000428457 NDUFAF8A1L188 74 aa5.69□□□□□ -1.5
TNS3-204ENST00000428457 DMDP11532 3685 aa5.68□□□□□ -1.5
TNS3-204ENST00000428457 M0QZ58 72 aa5.66□□□□□ -1.5
TNS3-204ENST00000428457 PLAC4Q8WY50 150 aa5.66□□□□□ -1.5
TNS3-204ENST00000428457 MXRA5Q9NR99 2828 aa5.64□□□□□ -1.51
TNS3-204ENST00000428457 KRTAP13-1Q8IUC0 172 aa5.6□□□□□ -1.51
TNS3-204ENST00000428457 A8MUU9 505 aa5.6□□□□□ -1.51
TNS3-204ENST00000428457 BSNQ9UPA5 3926 aa5.58□□□□□ -1.52
TNS3-204ENST00000428457 KRTAP13-2Q52LG2 175 aa5.56□□□□□ -1.52
TNS3-204ENST00000428457 CELSR1Q9NYQ6 3014 aa5.5□□□□□ -1.53
TNS3-204ENST00000428457 C10orf95Q9H7T3 257 aa5.48□□□□□ -1.53
TNS3-204ENST00000428457 AKAP9Q99996 3911 aa5.47□□□□□ -1.53
TNS3-204ENST00000428457 C20orf166-AS1Q96NR2 134 aa5.47□□□□□ -1.53
TNS3-204ENST00000428457 SMG1Q96Q15 3661 aaKnown RBP5.45□□□□□ -1.54
TNS3-204ENST00000428457 PDZD2O15018 2839 aa5.44□□□□□ -1.54
TNS3-204ENST00000428457 H0YAA0 97 aa5.44□□□□□ -1.54
TNS3-204ENST00000428457 TENM3Q9P273 2699 aa5.44□□□□□ -1.54
TNS3-204ENST00000428457 CSMD1Q96PZ7 3565 aa5.43□□□□□ -1.54
TNS3-204ENST00000428457 TENM1Q9UKZ4 2725 aa5.42□□□□□ -1.54
TNS3-204ENST00000428457 TPRXLQ17RH7 258 aa5.39□□□□□ -1.55
TNS3-204ENST00000428457 NBPF19A0A087WUL8 3843 aa5.38□□□□□ -1.55
TNS3-204ENST00000428457 ANK2Q01484 3957 aa5.37□□□□□ -1.55
TNS3-204ENST00000428457 OTOGQ6ZRI0 2925 aa5.36□□□□□ -1.55
TNS3-204ENST00000428457 TGP01266 2768 aa5.35□□□□□ -1.55
TNS3-204ENST00000428457 FBN1P35555 2871 aaKnown RBP5.34□□□□□ -1.55
TNS3-204ENST00000428457 TENM2Q9NT68 2774 aa5.34□□□□□ -1.55
TNS3-204ENST00000428457 SVEP1Q4LDE5 3571 aa5.34□□□□□ -1.56
TNS3-204ENST00000428457 PKD1L1Q8TDX9 2849 aa5.33□□□□□ -1.56
TNS3-204ENST00000428457 VWFP04275 2813 aa5.32□□□□□ -1.56
TNS3-204ENST00000428457 KRTAP1-4P0C5Y4 121 aa5.31□□□□□ -1.56
TNS3-204ENST00000428457 XP32Q5T750 250 aa5.31□□□□□ -1.56
TNS3-204ENST00000428457 A0A1B0GVY2 172 aa5.3□□□□□ -1.56
TNS3-204ENST00000428457 CSMD2Q7Z408 3487 aa5.28□□□□□ -1.56
TNS3-204ENST00000428457 P0C880 135 aa5.27□□□□□ -1.57
TNS3-204ENST00000428457 SPENQ96T58 3664 aaKnown RBP5.26□□□□□ -1.57
TNS3-204ENST00000428457 CUBNO60494 3623 aa5.24□□□□□ -1.57
TNS3-204ENST00000428457 TNP1P09430 55 aa5.22□□□□□ -1.57
TNS3-204ENST00000428457 KRTAP13-3Q3SY46 172 aa5.21□□□□□ -1.58
TNS3-204ENST00000428457 KRTAP10-8P60410 259 aa5.21□□□□□ -1.58
TNS3-204ENST00000428457 DNAH3Q8TD57 4116 aa5.2□□□□□ -1.58
TNS3-204ENST00000428457 PRO2289Q9P1D8 64 aa5.17□□□□□ -1.58
TNS3-204ENST00000428457 KRTAP10-10P60014 251 aa5.15□□□□□ -1.59
TNS3-204ENST00000428457 ANK3Q12955 4377 aaKnown RBP5.14□□□□□ -1.59
TNS3-204ENST00000428457 PP632Q6XCG6 107 aa5.13□□□□□ -1.59
TNS3-204ENST00000428457 CMYA5Q8N3K9 4069 aa5.09□□□□□ -1.59
TNS3-204ENST00000428457 DNHD1Q96M86 4753 aa5.08□□□□□ -1.6
TNS3-204ENST00000428457 TRRAPQ9Y4A5 3859 aa5.08□□□□□ -1.6
TNS3-204ENST00000428457 KRTAP12-2P59991 146 aa5.05□□□□□ -1.6
TNS3-204ENST00000428457 SRRM2Q9UQ35 2752 aaKnown RBP4.97□□□□□ -1.61
TNS3-204ENST00000428457 FBN3Q75N90 2809 aa4.97□□□□□ -1.61
TNS3-204ENST00000428457 KRTAP3-1Q9BYR8 98 aa4.95□□□□□ -1.62
TNS3-204ENST00000428457 KRTAP12-1P59990 96 aa4.93□□□□□ -1.62
TNS3-204ENST00000428457 DYNC2H1Q8NCM8 4307 aaKnown RBP4.91□□□□□ -1.62
TNS3-204ENST00000428457 ZNF469Q96JG9 3925 aaPredicted RBP4.91□□□□□ -1.62
TNS3-204ENST00000428457 KRTAP13-4Q3LI77 160 aa4.9□□□□□ -1.62
TNS3-204ENST00000428457 VPS13CQ709C8 3753 aa4.88□□□□□ -1.63
TNS3-204ENST00000428457 DNAH1Q9P2D7 4330 aa4.88□□□□□ -1.63
TNS3-204ENST00000428457 MEGF8Q7Z7M0 2845 aa4.87□□□□□ -1.63
TNS3-204ENST00000428457 KRTAP10-6P60371 365 aaPredicted RBP4.83□□□□□ -1.64
TNS3-204ENST00000428457 LYSTQ99698 3801 aa4.82□□□□□ -1.64
TNS3-204ENST00000428457 COL7A1Q02388 2944 aa4.82□□□□□ -1.64
TNS3-204ENST00000428457 DNAH7Q8WXX0 4024 aa4.81□□□□□ -1.64
TNS3-204ENST00000428457 DNAH6Q9C0G6 4158 aa4.79□□□□□ -1.64
TNS3-204ENST00000428457 KRTAP15-1Q3LI76 137 aa4.78□□□□□ -1.64
TNS3-204ENST00000428457 HUWE1Q7Z6Z7 4374 aaKnown RBP4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms