RNA–Protein interactions for RNA: ENST00000422086.5

TUBA3FP-202, Transcript of tubulin alpha 3f pseudogene, humanhuman

TSL 1 (best) BASIC

Gene TUBA3FP, Length 1,974 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA3FP-202ENST00000422086 PKHD1P08F94 4074 aa11.07□□□□□ -0.64
TUBA3FP-202ENST00000422086 VPS13BQ7Z7G8 4022 aa11.07□□□□□ -0.64
TUBA3FP-202ENST00000422086 C4orf48Q5BLP8 95 aa11.07□□□□□ -0.64
TUBA3FP-202ENST00000422086 C8orf87E5RJ46 101 aa11.05□□□□□ -0.64
TUBA3FP-202ENST00000422086 SMR3BP02814 79 aaPredicted RBP11.04□□□□□ -0.64
TUBA3FP-202ENST00000422086 RPS28P62857 69 aaKnown RBP11.04□□□□□ -0.64
TUBA3FP-202ENST00000422086 ZCCHC13Q8WW36 166 aaKnown RBP11.04□□□□□ -0.64
TUBA3FP-202ENST00000422086 DYNC1H1Q14204 4646 aaKnown RBP11.04□□□□□ -0.64
TUBA3FP-202ENST00000422086 SPINK1P00995 79 aa11.03□□□□□ -0.64
TUBA3FP-202ENST00000422086 MRPL34Q9BQ48 92 aaKnown RBP11.02□□□□□ -0.65
TUBA3FP-202ENST00000422086 H0Y9P7 68 aa11.01□□□□□ -0.65
TUBA3FP-202ENST00000422086 RPS29P62273 56 aaKnown RBP11.01□□□□□ -0.65
TUBA3FP-202ENST00000422086 C1orf195Q5TG92 126 aa10.99□□□□□ -0.65
TUBA3FP-202ENST00000422086 SPAG11AQ6PDA7 123 aa10.99□□□□□ -0.65
TUBA3FP-202ENST00000422086 TRAV22A0A0B4J277 110 aa10.99□□□□□ -0.65
TUBA3FP-202ENST00000422086 KRTAP10-4P60372 401 aaPredicted RBP10.99□□□□□ -0.65
TUBA3FP-202ENST00000422086 LINC00304Q8N9R0 145 aa10.96□□□□□ -0.66
TUBA3FP-202ENST00000422086 PRR26Q8N8Z3 221 aa10.94□□□□□ -0.66
TUBA3FP-202ENST00000422086 LINC00208Q96KT6 92 aa10.94□□□□□ -0.66
TUBA3FP-202ENST00000422086 NDUFS5O43920 106 aa10.94□□□□□ -0.66
TUBA3FP-202ENST00000422086 SERP1Q9Y6X1 66 aa10.93□□□□□ -0.66
TUBA3FP-202ENST00000422086 APOBP04114 4563 aaKnown RBP10.92□□□□□ -0.66
TUBA3FP-202ENST00000422086 NOTCH2NLQ7Z3S9 236 aa10.92□□□□□ -0.66
TUBA3FP-202ENST00000422086 LINC00313P59037 77 aa10.9□□□□□ -0.66
TUBA3FP-202ENST00000422086 FAM229AH3BQW9 127 aa10.9□□□□□ -0.66
TUBA3FP-202ENST00000422086 KMT2CQ8NEZ4 4911 aaKnown RBP10.9□□□□□ -0.67
TUBA3FP-202ENST00000422086 C1orf64Q8NEQ6 169 aa10.89□□□□□ -0.67
TUBA3FP-202ENST00000422086 SPANXA2-OT1Q8N9U9 137 aa10.82□□□□□ -0.68
TUBA3FP-202ENST00000422086 Q8N9P0 234 aaPredicted RBP10.81□□□□□ -0.68
TUBA3FP-202ENST00000422086 CYP4F30PQ9H0H9 118 aa10.79□□□□□ -0.68
TUBA3FP-202ENST00000422086 LOC101927531A0A1B0GV80 90 aa10.77□□□□□ -0.69
TUBA3FP-202ENST00000422086 OXTP01178 125 aa10.76□□□□□ -0.69
TUBA3FP-202ENST00000422086 KRTAP16-1A8MUX0 517 aa10.76□□□□□ -0.69
TUBA3FP-202ENST00000422086 Q5VSD8 79 aa10.75□□□□□ -0.69
TUBA3FP-202ENST00000422086 PKHD1L1Q86WI1 4243 aa10.74□□□□□ -0.69
TUBA3FP-202ENST00000422086 KRTAP13-3Q3SY46 172 aa10.73□□□□□ -0.69
TUBA3FP-202ENST00000422086 FAT1Q14517 4588 aa10.71□□□□□ -0.7
TUBA3FP-202ENST00000422086 Q5W150 140 aa10.68□□□□□ -0.7
TUBA3FP-202ENST00000422086 SMIM26A0A096LP01 95 aa10.68□□□□□ -0.7
TUBA3FP-202ENST00000422086 IGLV7-46A0A075B6I9 117 aa10.66□□□□□ -0.7
TUBA3FP-202ENST00000422086 PCOTHQ58A44 107 aa10.64□□□□□ -0.71
TUBA3FP-202ENST00000422086 PRR4Q16378 134 aa10.63□□□□□ -0.71
TUBA3FP-202ENST00000422086 RYR3Q15413 4870 aa10.61□□□□□ -0.71
TUBA3FP-202ENST00000422086 KRTAP10-8P60410 259 aa10.59□□□□□ -0.71
TUBA3FP-202ENST00000422086 IGKV2-30P06310 120 aa10.57□□□□□ -0.72
TUBA3FP-202ENST00000422086 HSPG2P98160 4391 aa10.57□□□□□ -0.72
TUBA3FP-202ENST00000422086 Q8N1X5 172 aa10.55□□□□□ -0.72
TUBA3FP-202ENST00000422086 RYR1P21817 5038 aa10.53□□□□□ -0.72
TUBA3FP-202ENST00000422086 FP248Q71RG6 208 aaPredicted RBP10.51□□□□□ -0.73
TUBA3FP-202ENST00000422086 C20orf166-AS1Q96NR2 134 aa10.51□□□□□ -0.73
TUBA3FP-202ENST00000422086 RETNLBQ9BQ08 111 aa10.51□□□□□ -0.73
TUBA3FP-202ENST00000422086 A8MUU9 505 aa10.48□□□□□ -0.73
TUBA3FP-202ENST00000422086 FLG2Q5D862 2391 aaPredicted RBP10.48□□□□□ -0.73
TUBA3FP-202ENST00000422086 C9orf92A6NGG3 77 aa10.46□□□□□ -0.74
TUBA3FP-202ENST00000422086 COA5Q86WW8 74 aa10.45□□□□□ -0.74
TUBA3FP-202ENST00000422086 HRES1P13985 223 aa10.44□□□□□ -0.74
TUBA3FP-202ENST00000422086 C7orf65Q6ZTY9 151 aa10.43□□□□□ -0.74
TUBA3FP-202ENST00000422086 IGKV2D-30A0A075B6S6 120 aa10.42□□□□□ -0.74
TUBA3FP-202ENST00000422086 V9GYY9 64 aa10.4□□□□□ -0.74
TUBA3FP-202ENST00000422086 Q1T7F1 81 aa10.39□□□□□ -0.75
TUBA3FP-202ENST00000422086 KRTAP17-1Q9BYP8 105 aa10.39□□□□□ -0.75
TUBA3FP-202ENST00000422086 TNXBP22105 4242 aa10.39□□□□□ -0.75
TUBA3FP-202ENST00000422086 C4orf26Q17RF5 130 aa10.39□□□□□ -0.75
TUBA3FP-202ENST00000422086 DMAC1Q96GE9 116 aa10.39□□□□□ -0.75
TUBA3FP-202ENST00000422086 ACYP2P14621 99 aa10.38□□□□□ -0.75
TUBA3FP-202ENST00000422086 Q75L30 129 aa10.38□□□□□ -0.75
TUBA3FP-202ENST00000422086 MPLKIPQ8TAP9 179 aa10.37□□□□□ -0.75
TUBA3FP-202ENST00000422086 MT1HL1P0DM35 61 aa10.34□□□□□ -0.75
TUBA3FP-202ENST00000422086 FAT3Q8TDW7 4589 aa10.32□□□□□ -0.76
TUBA3FP-202ENST00000422086 LRP1Q07954 4544 aaKnown RBP10.3□□□□□ -0.76
TUBA3FP-202ENST00000422086 KIAA1109Q2LD37 5005 aa10.3□□□□□ -0.76
TUBA3FP-202ENST00000422086 A8MUN3 132 aa10.24□□□□□ -0.77
TUBA3FP-202ENST00000422086 CHKB-CPT1BH3BT56 60 aa10.23□□□□□ -0.77
TUBA3FP-202ENST00000422086 EPPK1P58107 5090 aaKnown RBP10.21□□□□□ -0.77
TUBA3FP-202ENST00000422086 ATP11AUNQ6ZP68 121 aa10.2□□□□□ -0.78
TUBA3FP-202ENST00000422086 RPL37P61927 97 aaKnown RBP10.19□□□□□ -0.78
TUBA3FP-202ENST00000422086 DMBT1Q9UGM3 2413 aaPredicted RBP10.17□□□□□ -0.78
TUBA3FP-202ENST00000422086 SPINK7P58062 85 aa10.17□□□□□ -0.78
TUBA3FP-202ENST00000422086 XP32Q5T750 250 aa10.16□□□□□ -0.78
TUBA3FP-202ENST00000422086 LINC01558Q9Y6Z2 57 aa10.15□□□□□ -0.78
TUBA3FP-202ENST00000422086 PSPHP1O15172 72 aa10.13□□□□□ -0.79
TUBA3FP-202ENST00000422086 PRR15LQ9BU68 103 aa10.1□□□□□ -0.79
TUBA3FP-202ENST00000422086 TPRXLQ17RH7 258 aa10.1□□□□□ -0.79
TUBA3FP-202ENST00000422086 KRTAP4-5Q9BYR2 181 aa10.08□□□□□ -0.8
TUBA3FP-202ENST00000422086 MYCBP2O75592 4640 aa10.07□□□□□ -0.8
TUBA3FP-202ENST00000422086 Q5VV11 94 aa10.06□□□□□ -0.8
TUBA3FP-202ENST00000422086 SPTSSBQ8NFR3 76 aa10.01□□□□□ -0.81
TUBA3FP-202ENST00000422086 COX6B2Q6YFQ2 88 aa10□□□□□ -0.81
TUBA3FP-202ENST00000422086 BRK1Q8WUW1 75 aa9.98□□□□□ -0.81
TUBA3FP-202ENST00000422086 PRO0628Q9UI54 55 aa9.95□□□□□ -0.82
TUBA3FP-202ENST00000422086 J3QL48 77 aa9.94□□□□□ -0.82
TUBA3FP-202ENST00000422086 SVIPQ8NHG7 77 aa9.94□□□□□ -0.82
TUBA3FP-202ENST00000422086 KRTAP3-1Q9BYR8 98 aa9.94□□□□□ -0.82
TUBA3FP-202ENST00000422086 A0A1B0GU69 56 aa9.9□□□□□ -0.82
TUBA3FP-202ENST00000422086 A6NED7 52 aa9.87□□□□□ -0.83
TUBA3FP-202ENST00000422086 BIRC6Q9NR09 4857 aa9.84□□□□□ -0.83
TUBA3FP-202ENST00000422086 SEC61GP60059 68 aa9.8□□□□□ -0.84
TUBA3FP-202ENST00000422086 HERC2O95714 4834 aa9.79□□□□□ -0.84
TUBA3FP-202ENST00000422086 CDC42SE1Q9NRR8 79 aa9.76□□□□□ -0.85
TUBA3FP-202ENST00000422086 SEC61BP60468 96 aaKnown RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms