RNA–Protein interactions for RNA: ENST00000420820.6

CROCCP3-202, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

BASIC

Gene CROCCP3, Length 1,947 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-202ENST00000420820 CDK2AP2O75956 126 aa11.08□□□□□ -0.64
CROCCP3-202ENST00000420820 FAM229BQ4G0N7 80 aa11.08□□□□□ -0.64
CROCCP3-202ENST00000420820 C1orf64Q8NEQ6 169 aa11.06□□□□□ -0.64
CROCCP3-202ENST00000420820 A0A087X002 238 aa11.05□□□□□ -0.64
CROCCP3-202ENST00000420820 NOTCH2NLQ7Z3S9 236 aa11.05□□□□□ -0.64
CROCCP3-202ENST00000420820 KRTAP13-2Q52LG2 175 aa11.05□□□□□ -0.64
CROCCP3-202ENST00000420820 SPANXA2-OT1Q8N9U9 137 aa11.04□□□□□ -0.64
CROCCP3-202ENST00000420820 MRPL34Q9BQ48 92 aaKnown RBP11.03□□□□□ -0.64
CROCCP3-202ENST00000420820 VPS13BQ7Z7G8 4022 aa11.03□□□□□ -0.64
CROCCP3-202ENST00000420820 KMT2CQ8NEZ4 4911 aaKnown RBP11.03□□□□□ -0.64
CROCCP3-202ENST00000420820 KRTAP1-4P0C5Y4 121 aa11.01□□□□□ -0.65
CROCCP3-202ENST00000420820 SPINK6Q6UWN8 80 aa10.99□□□□□ -0.65
CROCCP3-202ENST00000420820 PRR4Q16378 134 aa10.97□□□□□ -0.65
CROCCP3-202ENST00000420820 RYR2Q92736 4967 aa10.94□□□□□ -0.66
CROCCP3-202ENST00000420820 NDUFS5O43920 106 aa10.94□□□□□ -0.66
CROCCP3-202ENST00000420820 C8orf87E5RJ46 101 aa10.93□□□□□ -0.66
CROCCP3-202ENST00000420820 PKHD1P08F94 4074 aa10.93□□□□□ -0.66
CROCCP3-202ENST00000420820 C1orf195Q5TG92 126 aa10.91□□□□□ -0.66
CROCCP3-202ENST00000420820 IGLV7-46A0A075B6I9 117 aa10.9□□□□□ -0.67
CROCCP3-202ENST00000420820 KRTAP13-3Q3SY46 172 aa10.89□□□□□ -0.67
CROCCP3-202ENST00000420820 DYNC1H1Q14204 4646 aaKnown RBP10.87□□□□□ -0.67
CROCCP3-202ENST00000420820 LINC00336Q6ZUF6 198 aa10.87□□□□□ -0.67
CROCCP3-202ENST00000420820 MPLKIPQ8TAP9 179 aa10.86□□□□□ -0.67
CROCCP3-202ENST00000420820 Q1T7F1 81 aa10.84□□□□□ -0.67
CROCCP3-202ENST00000420820 Q5W150 140 aa10.84□□□□□ -0.67
CROCCP3-202ENST00000420820 PLA2G1BP04054 148 aaKnown RBP10.83□□□□□ -0.68
CROCCP3-202ENST00000420820 PCOTHQ58A44 107 aa10.83□□□□□ -0.68
CROCCP3-202ENST00000420820 LINC00313P59037 77 aa10.82□□□□□ -0.68
CROCCP3-202ENST00000420820 LIMD2Q9BT23 127 aa10.82□□□□□ -0.68
CROCCP3-202ENST00000420820 RYR3Q15413 4870 aa10.82□□□□□ -0.68
CROCCP3-202ENST00000420820 A0A1B0GVY2 172 aa10.81□□□□□ -0.68
CROCCP3-202ENST00000420820 Q8N9P0 234 aaPredicted RBP10.8□□□□□ -0.68
CROCCP3-202ENST00000420820 LOC101927531A0A1B0GV80 90 aa10.79□□□□□ -0.68
CROCCP3-202ENST00000420820 TYMSOSQ8TAI1 123 aa10.78□□□□□ -0.68
CROCCP3-202ENST00000420820 KRTAP16-1A8MUX0 517 aa10.77□□□□□ -0.69
CROCCP3-202ENST00000420820 APOBP04114 4563 aaKnown RBP10.76□□□□□ -0.69
CROCCP3-202ENST00000420820 SPINK1P00995 79 aa10.75□□□□□ -0.69
CROCCP3-202ENST00000420820 SEC61GP60059 68 aa10.73□□□□□ -0.69
CROCCP3-202ENST00000420820 C4orf48Q5BLP8 95 aa10.73□□□□□ -0.69
CROCCP3-202ENST00000420820 COA5Q86WW8 74 aa10.72□□□□□ -0.69
CROCCP3-202ENST00000420820 FAM229AH3BQW9 127 aa10.7□□□□□ -0.7
CROCCP3-202ENST00000420820 RPS29P62273 56 aaKnown RBP10.7□□□□□ -0.7
CROCCP3-202ENST00000420820 KRTAP10-4P60372 401 aaPredicted RBP10.69□□□□□ -0.7
CROCCP3-202ENST00000420820 V9GYY9 64 aa10.68□□□□□ -0.7
CROCCP3-202ENST00000420820 PRR26Q8N8Z3 221 aa10.68□□□□□ -0.7
CROCCP3-202ENST00000420820 FAT1Q14517 4588 aa10.67□□□□□ -0.7
CROCCP3-202ENST00000420820 PKHD1L1Q86WI1 4243 aa10.67□□□□□ -0.7
CROCCP3-202ENST00000420820 SMR3BP02814 79 aaPredicted RBP10.66□□□□□ -0.7
CROCCP3-202ENST00000420820 LINC00304Q8N9R0 145 aa10.65□□□□□ -0.7
CROCCP3-202ENST00000420820 SPAG11AQ6PDA7 123 aa10.64□□□□□ -0.71
CROCCP3-202ENST00000420820 HRES1P13985 223 aa10.62□□□□□ -0.71
CROCCP3-202ENST00000420820 PRO0628Q9UI54 55 aa10.62□□□□□ -0.71
CROCCP3-202ENST00000420820 IGKV2-30P06310 120 aa10.61□□□□□ -0.71
CROCCP3-202ENST00000420820 PSPHP1O15172 72 aa10.6□□□□□ -0.71
CROCCP3-202ENST00000420820 A8MUN3 132 aa10.56□□□□□ -0.72
CROCCP3-202ENST00000420820 RETNLBQ9BQ08 111 aa10.56□□□□□ -0.72
CROCCP3-202ENST00000420820 BRK1Q8WUW1 75 aa10.55□□□□□ -0.72
CROCCP3-202ENST00000420820 Q5VV11 94 aa10.54□□□□□ -0.72
CROCCP3-202ENST00000420820 DMAC1Q96GE9 116 aa10.52□□□□□ -0.73
CROCCP3-202ENST00000420820 ACYP2P14621 99 aa10.49□□□□□ -0.73
CROCCP3-202ENST00000420820 LINC01558Q9Y6Z2 57 aa10.48□□□□□ -0.73
CROCCP3-202ENST00000420820 PRR15LQ9BU68 103 aa10.46□□□□□ -0.74
CROCCP3-202ENST00000420820 EPPK1P58107 5090 aaKnown RBP10.43□□□□□ -0.74
CROCCP3-202ENST00000420820 Q75L30 129 aa10.42□□□□□ -0.74
CROCCP3-202ENST00000420820 IGKV2D-30A0A075B6S6 120 aa10.41□□□□□ -0.74
CROCCP3-202ENST00000420820 CHKB-CPT1BH3BT56 60 aa10.37□□□□□ -0.75
CROCCP3-202ENST00000420820 C20orf166-AS1Q96NR2 134 aa10.37□□□□□ -0.75
CROCCP3-202ENST00000420820 A8MUU9 505 aa10.36□□□□□ -0.75
CROCCP3-202ENST00000420820 HSPG2P98160 4391 aa10.34□□□□□ -0.75
CROCCP3-202ENST00000420820 C7orf65Q6ZTY9 151 aa10.32□□□□□ -0.76
CROCCP3-202ENST00000420820 TNXBP22105 4242 aa10.32□□□□□ -0.76
CROCCP3-202ENST00000420820 C9orf92A6NGG3 77 aa10.3□□□□□ -0.76
CROCCP3-202ENST00000420820 FAT3Q8TDW7 4589 aa10.28□□□□□ -0.76
CROCCP3-202ENST00000420820 FLG2Q5D862 2391 aaPredicted RBP10.28□□□□□ -0.76
CROCCP3-202ENST00000420820 A8MU10 97 aa10.26□□□□□ -0.77
CROCCP3-202ENST00000420820 KRTAP10-8P60410 259 aa10.26□□□□□ -0.77
CROCCP3-202ENST00000420820 RYR1P21817 5038 aa10.25□□□□□ -0.77
CROCCP3-202ENST00000420820 LRP1Q07954 4544 aaKnown RBP10.24□□□□□ -0.77
CROCCP3-202ENST00000420820 Q5VSD8 79 aa10.24□□□□□ -0.77
CROCCP3-202ENST00000420820 Q8N1X5 172 aa10.24□□□□□ -0.77
CROCCP3-202ENST00000420820 KIAA1109Q2LD37 5005 aa10.23□□□□□ -0.77
CROCCP3-202ENST00000420820 A6NED7 52 aa10.23□□□□□ -0.77
CROCCP3-202ENST00000420820 LCA10Q71F78 164 aa10.23□□□□□ -0.77
CROCCP3-202ENST00000420820 KRTAP17-1Q9BYP8 105 aa10.19□□□□□ -0.78
CROCCP3-202ENST00000420820 CDC42SE1Q9NRR8 79 aa10.17□□□□□ -0.78
CROCCP3-202ENST00000420820 SPINK7P58062 85 aa10.17□□□□□ -0.78
CROCCP3-202ENST00000420820 BIRC6Q9NR09 4857 aa10.15□□□□□ -0.78
CROCCP3-202ENST00000420820 A0A1B0GU69 56 aa10.09□□□□□ -0.79
CROCCP3-202ENST00000420820 ATP11AUNQ6ZP68 121 aa10.09□□□□□ -0.79
CROCCP3-202ENST00000420820 KRTAP3-1Q9BYR8 98 aa10.07□□□□□ -0.8
CROCCP3-202ENST00000420820 PMAIP1Q13794 54 aa9.99□□□□□ -0.81
CROCCP3-202ENST00000420820 MT1HL1P0DM35 61 aa9.98□□□□□ -0.81
CROCCP3-202ENST00000420820 SPTSSBQ8NFR3 76 aa9.98□□□□□ -0.81
CROCCP3-202ENST00000420820 HERC2O95714 4834 aa9.96□□□□□ -0.81
CROCCP3-202ENST00000420820 RPL37P61927 97 aaKnown RBP9.95□□□□□ -0.82
CROCCP3-202ENST00000420820 MYCBP2O75592 4640 aa9.95□□□□□ -0.82
CROCCP3-202ENST00000420820 SPATA8Q6RVD6 105 aa9.93□□□□□ -0.82
CROCCP3-202ENST00000420820 COX6B2Q6YFQ2 88 aa9.93□□□□□ -0.82
CROCCP3-202ENST00000420820 DMBT1Q9UGM3 2413 aaPredicted RBP9.93□□□□□ -0.82
CROCCP3-202ENST00000420820 A6NN06 94 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms