RNA–Protein interactions for RNA: ENST00000420239.6

CHD2-202, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene CHD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-202ENST00000420239 KRTAP10-11P60412 298 aa3.65□□□□□ -1.83
CHD2-202ENST00000420239 ZNF462Q96JM2 2506 aa3.65□□□□□ -1.83
CHD2-202ENST00000420239 PDZD2O15018 2839 aa3.65□□□□□ -1.83
CHD2-202ENST00000420239 KRTAP13-1Q8IUC0 172 aa3.64□□□□□ -1.83
CHD2-202ENST00000420239 SMR3AQ99954 134 aa3.64□□□□□ -1.83
CHD2-202ENST00000420239 CENPEQ02224 2701 aa3.64□□□□□ -1.83
CHD2-202ENST00000420239 ALMS1Q8TCU4 4167 aa3.64□□□□□ -1.83
CHD2-202ENST00000420239 IGHV6-1A0A0B4J1U7 121 aa3.63□□□□□ -1.83
CHD2-202ENST00000420239 SPATA8Q6RVD6 105 aa3.63□□□□□ -1.83
CHD2-202ENST00000420239 NOTCH2NLQ7Z3S9 236 aa3.63□□□□□ -1.83
CHD2-202ENST00000420239 A0A1B0GVX0 72 aa3.63□□□□□ -1.83
CHD2-202ENST00000420239 KRTAP13-3Q3SY46 172 aa3.63□□□□□ -1.83
CHD2-202ENST00000420239 MRPL34Q9BQ48 92 aaKnown RBP3.63□□□□□ -1.83
CHD2-202ENST00000420239 ACANP16112 2415 aa3.62□□□□□ -1.83
CHD2-202ENST00000420239 MTORP42345 2549 aa3.62□□□□□ -1.83
CHD2-202ENST00000420239 Q5W150 140 aa3.62□□□□□ -1.83
CHD2-202ENST00000420239 HELZ2Q9BYK8 2649 aaKnown RBP3.62□□□□□ -1.83
CHD2-202ENST00000420239 CSAG1Q6PB30 78 aa3.62□□□□□ -1.83
CHD2-202ENST00000420239 CHTF8P0CG12 524 aa3.61□□□□□ -1.83
CHD2-202ENST00000420239 LINC00483Q53H64 154 aa3.61□□□□□ -1.83
CHD2-202ENST00000420239 TENM2Q9NT68 2774 aa3.61□□□□□ -1.83
CHD2-202ENST00000420239 C14orf177Q52M58 125 aa3.6□□□□□ -1.83
CHD2-202ENST00000420239 A0A1B0GU69 56 aa3.59□□□□□ -1.83
CHD2-202ENST00000420239 ACYP2P14621 99 aa3.59□□□□□ -1.83
CHD2-202ENST00000420239 DMAC1Q96GE9 116 aa3.59□□□□□ -1.83
CHD2-202ENST00000420239 NOTCH2Q04721 2471 aa3.59□□□□□ -1.83
CHD2-202ENST00000420239 MIR22HGQ0VDD5 57 aa3.59□□□□□ -1.84
CHD2-202ENST00000420239 RETNLBQ9BQ08 111 aa3.59□□□□□ -1.84
CHD2-202ENST00000420239 PKD1L1Q8TDX9 2849 aa3.58□□□□□ -1.84
CHD2-202ENST00000420239 KRTAP9-3Q9BYQ3 159 aa3.58□□□□□ -1.84
CHD2-202ENST00000420239 F8P00451 2351 aa3.58□□□□□ -1.84
CHD2-202ENST00000420239 KRTAP1-5Q9BYS1 174 aa3.58□□□□□ -1.84
CHD2-202ENST00000420239 SRRM2Q9UQ35 2752 aaKnown RBP3.57□□□□□ -1.84
CHD2-202ENST00000420239 TRRAPQ9Y4A5 3859 aa3.56□□□□□ -1.84
CHD2-202ENST00000420239 ANK2Q01484 3957 aa3.56□□□□□ -1.84
CHD2-202ENST00000420239 DNAH3Q8TD57 4116 aa3.56□□□□□ -1.84
CHD2-202ENST00000420239 UQCR11O14957 56 aa3.55□□□□□ -1.84
CHD2-202ENST00000420239 ZNF861PO60384 105 aa3.55□□□□□ -1.84
CHD2-202ENST00000420239 ZNF706Q9Y5V0 76 aaPredicted RBP3.55□□□□□ -1.84
CHD2-202ENST00000420239 HECTD1Q9ULT8 2610 aa3.55□□□□□ -1.84
CHD2-202ENST00000420239 PANO1I0J062 215 aa3.55□□□□□ -1.84
CHD2-202ENST00000420239 DNAH10Q8IVF4 4471 aa3.55□□□□□ -1.84
CHD2-202ENST00000420239 IGKV2-30P06310 120 aa3.54□□□□□ -1.84
CHD2-202ENST00000420239 HUWE1Q7Z6Z7 4374 aaKnown RBP3.54□□□□□ -1.84
CHD2-202ENST00000420239 TENM3Q9P273 2699 aa3.53□□□□□ -1.84
CHD2-202ENST00000420239 TENM4Q6N022 2769 aa3.53□□□□□ -1.84
CHD2-202ENST00000420239 DNAH9Q9NYC9 4486 aa3.53□□□□□ -1.84
CHD2-202ENST00000420239 CSMD3Q7Z407 3707 aa3.53□□□□□ -1.84
CHD2-202ENST00000420239 TENM1Q9UKZ4 2725 aa3.53□□□□□ -1.85
CHD2-202ENST00000420239 CMYA5Q8N3K9 4069 aa3.52□□□□□ -1.85
CHD2-202ENST00000420239 ANAPC11Q9NYG5 84 aa3.52□□□□□ -1.85
CHD2-202ENST00000420239 J3QKU1 62 aa3.51□□□□□ -1.85
CHD2-202ENST00000420239 C1orf134Q5TEV5 83 aa3.51□□□□□ -1.85
CHD2-202ENST00000420239 SPACA4Q8TDM5 124 aa3.51□□□□□ -1.85
CHD2-202ENST00000420239 TEP1Q99973 2627 aaKnown RBP3.51□□□□□ -1.85
CHD2-202ENST00000420239 SPINK6Q6UWN8 80 aa3.51□□□□□ -1.85
CHD2-202ENST00000420239 DYNC2H1Q8NCM8 4307 aaKnown RBP3.5□□□□□ -1.85
CHD2-202ENST00000420239 APLNQ9ULZ1 77 aa3.5□□□□□ -1.85
CHD2-202ENST00000420239 DNAH8Q96JB1 4490 aa3.5□□□□□ -1.85
CHD2-202ENST00000420239 IGLV7-43P04211 117 aa3.5□□□□□ -1.85
CHD2-202ENST00000420239 FBN1P35555 2871 aaKnown RBP3.49□□□□□ -1.85
CHD2-202ENST00000420239 Q6ZRN7 208 aaPredicted RBP3.49□□□□□ -1.85
CHD2-202ENST00000420239 LYSTQ99698 3801 aa3.48□□□□□ -1.85
CHD2-202ENST00000420239 ITPR2Q14571 2701 aa3.48□□□□□ -1.85
CHD2-202ENST00000420239 KRTAP25-1Q3LHN0 102 aa3.48□□□□□ -1.85
CHD2-202ENST00000420239 ROMO1P60602 79 aa3.47□□□□□ -1.85
CHD2-202ENST00000420239 NSD1Q96L73 2696 aaPredicted RBP3.47□□□□□ -1.85
CHD2-202ENST00000420239 ATRQ13535 2644 aa3.47□□□□□ -1.85
CHD2-202ENST00000420239 UBE2DNLQ8IWF7 75 aa3.47□□□□□ -1.85
CHD2-202ENST00000420239 PSORS1C2Q9UIG4 136 aa3.47□□□□□ -1.85
CHD2-202ENST00000420239 A8MUU9 505 aa3.46□□□□□ -1.86
CHD2-202ENST00000420239 NBDYA0A0U1RRE5 68 aa3.46□□□□□ -1.86
CHD2-202ENST00000420239 KRTAP24-1Q3LI83 254 aa3.46□□□□□ -1.86
CHD2-202ENST00000420239 SSBP3-AS1Q7Z2R9 100 aa3.46□□□□□ -1.86
CHD2-202ENST00000420239 DNAH17Q9UFH2 4485 aa3.45□□□□□ -1.86
CHD2-202ENST00000420239 LCE5AQ5TCM9 118 aa3.44□□□□□ -1.86
CHD2-202ENST00000420239 IGKV2D-30A0A075B6S6 120 aa3.44□□□□□ -1.86
CHD2-202ENST00000420239 KRTAP16-1A8MUX0 517 aa3.44□□□□□ -1.86
CHD2-202ENST00000420239 H0YAA0 97 aa3.44□□□□□ -1.86
CHD2-202ENST00000420239 LINC00304Q8N9R0 145 aa3.44□□□□□ -1.86
CHD2-202ENST00000420239 P0C880 135 aa3.42□□□□□ -1.86
CHD2-202ENST00000420239 Q6ZSA8 131 aa3.42□□□□□ -1.86
CHD2-202ENST00000420239 CIRBP-AS1Q8TBR5 109 aa3.42□□□□□ -1.86
CHD2-202ENST00000420239 A0A087WTM6 91 aa3.42□□□□□ -1.86
CHD2-202ENST00000420239 SPINK1P00995 79 aa3.41□□□□□ -1.86
CHD2-202ENST00000420239 COL7A1Q02388 2944 aa3.41□□□□□ -1.86
CHD2-202ENST00000420239 VPS13DQ5THJ4 4388 aa3.41□□□□□ -1.86
CHD2-202ENST00000420239 LY6G6CO95867 125 aa3.4□□□□□ -1.86
CHD2-202ENST00000420239 FRAS1Q86XX4 4008 aa3.38□□□□□ -1.87
CHD2-202ENST00000420239 TYMSOSQ8TAI1 123 aa3.38□□□□□ -1.87
CHD2-202ENST00000420239 CRIPTQ9P021 101 aa3.38□□□□□ -1.87
CHD2-202ENST00000420239 PLECQ15149 4684 aaKnown RBP3.37□□□□□ -1.87
CHD2-202ENST00000420239 NUPR2A6NF83 97 aa3.36□□□□□ -1.87
CHD2-202ENST00000420239 KRTAP13-2Q52LG2 175 aa3.35□□□□□ -1.87
CHD2-202ENST00000420239 H1FX-AS1Q4G0G2 97 aa3.34□□□□□ -1.87
CHD2-202ENST00000420239 DNHD1Q96M86 4753 aa3.34□□□□□ -1.87
CHD2-202ENST00000420239 DNAH2Q9P225 4427 aa3.34□□□□□ -1.87
CHD2-202ENST00000420239 A0A1B0GU33 70 aa3.34□□□□□ -1.88
CHD2-202ENST00000420239 PRKDCP78527 4128 aaKnown RBP3.33□□□□□ -1.88
CHD2-202ENST00000420239 HECTD4Q9Y4D8 3996 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 168.6 ms