RNA–Protein interactions for RNA: ENST00000419629.1

SDCBPP3-201, Transcript of syndecan binding protein pseudogene 3, humanhuman

BASIC

Gene SDCBPP3, Length 891 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP3-201ENST00000419629 NBPF19A0A087WUL8 3843 aa1.87□□□□□ -2.11
SDCBPP3-201ENST00000419629 H3BNG1 76 aa1.87□□□□□ -2.11
SDCBPP3-201ENST00000419629 LY6G6CO95867 125 aa1.87□□□□□ -2.11
SDCBPP3-201ENST00000419629 ROS1P08922 2347 aa1.87□□□□□ -2.11
SDCBPP3-201ENST00000419629 P0C880 135 aa1.87□□□□□ -2.11
SDCBPP3-201ENST00000419629 SPART-AS1P0CW21 52 aa1.87□□□□□ -2.11
SDCBPP3-201ENST00000419629 KRTAP21-3Q3LHN1 58 aa1.87□□□□□ -2.11
SDCBPP3-201ENST00000419629 KRTAP26-1Q6PEX3 210 aa1.87□□□□□ -2.11
SDCBPP3-201ENST00000419629 DEFB124Q8NES8 71 aa1.87□□□□□ -2.11
SDCBPP3-201ENST00000419629 C20orf166-AS1Q96NR2 134 aa1.87□□□□□ -2.11
SDCBPP3-201ENST00000419629 CCL19Q99731 98 aa1.87□□□□□ -2.11
SDCBPP3-201ENST00000419629 POLQO75417 2590 aa1.87□□□□□ -2.11
SDCBPP3-201ENST00000419629 CR1P17927 2039 aa1.86□□□□□ -2.11
SDCBPP3-201ENST00000419629 COL6A6A6NMZ7 2263 aa1.86□□□□□ -2.11
SDCBPP3-201ENST00000419629 DEFB113Q30KQ7 82 aa1.86□□□□□ -2.11
SDCBPP3-201ENST00000419629 CREBBPQ92793 2442 aa1.86□□□□□ -2.11
SDCBPP3-201ENST00000419629 CELSR3Q9NYQ7 3312 aa1.86□□□□□ -2.11
SDCBPP3-201ENST00000419629 ATMQ13315 3056 aa1.85□□□□□ -2.11
SDCBPP3-201ENST00000419629 SPG11Q96JI7 2443 aa1.85□□□□□ -2.11
SDCBPP3-201ENST00000419629 SPRR5A0A1B0GTR4 108 aa1.85□□□□□ -2.11
SDCBPP3-201ENST00000419629 LUZP6Q538Z0 58 aa1.85□□□□□ -2.11
SDCBPP3-201ENST00000419629 LINC01556Q5JQF7 62 aa1.85□□□□□ -2.11
SDCBPP3-201ENST00000419629 Q5W150 140 aa1.85□□□□□ -2.11
SDCBPP3-201ENST00000419629 SPINT4Q6UDR6 99 aa1.85□□□□□ -2.11
SDCBPP3-201ENST00000419629 PCNX1Q96RV3 2341 aa1.85□□□□□ -2.11
SDCBPP3-201ENST00000419629 RP1L1Q8IWN7 2480 aaPredicted RBP1.84□□□□□ -2.11
SDCBPP3-201ENST00000419629 MGAQ8IWI9 3026 aa1.84□□□□□ -2.11
SDCBPP3-201ENST00000419629 NF1P21359 2839 aa1.84□□□□□ -2.11
SDCBPP3-201ENST00000419629 LRBAP50851 2863 aa1.84□□□□□ -2.11
SDCBPP3-201ENST00000419629 A0A0G2JQZ4 141 aa1.84□□□□□ -2.11
SDCBPP3-201ENST00000419629 A0A1W2PNN7 141 aa1.84□□□□□ -2.11
SDCBPP3-201ENST00000419629 LINC00304Q8N9R0 145 aa1.84□□□□□ -2.11
SDCBPP3-201ENST00000419629 Q96NJ1 140 aa1.84□□□□□ -2.11
SDCBPP3-201ENST00000419629 CELSR1Q9NYQ6 3014 aa1.84□□□□□ -2.12
SDCBPP3-201ENST00000419629 ACACAQ13085 2346 aa1.84□□□□□ -2.12
SDCBPP3-201ENST00000419629 ITPR2Q14571 2701 aa1.83□□□□□ -2.12
SDCBPP3-201ENST00000419629 SETD2Q9BYW2 2564 aaPredicted RBP1.83□□□□□ -2.12
SDCBPP3-201ENST00000419629 J3QKU1 62 aa1.83□□□□□ -2.12
SDCBPP3-201ENST00000419629 HTN3P15516 51 aa1.83□□□□□ -2.12
SDCBPP3-201ENST00000419629 PRLHP81277 87 aa1.83□□□□□ -2.12
SDCBPP3-201ENST00000419629 SSBP3-AS1Q7Z2R9 100 aa1.83□□□□□ -2.12
SDCBPP3-201ENST00000419629 ANKHD1Q8IWZ3 2542 aaKnown RBP1.82□□□□□ -2.12
SDCBPP3-201ENST00000419629 APC2O95996 2303 aa1.82□□□□□ -2.12
SDCBPP3-201ENST00000419629 A0A087WTM6 91 aa1.82□□□□□ -2.12
SDCBPP3-201ENST00000419629 KRTAP21-2Q3LI59 83 aa1.82□□□□□ -2.12
SDCBPP3-201ENST00000419629 SPENQ96T58 3664 aaKnown RBP1.82□□□□□ -2.12
SDCBPP3-201ENST00000419629 FLNCQ14315 2725 aa1.82□□□□□ -2.12
SDCBPP3-201ENST00000419629 UTP20O75691 2785 aaKnown RBP1.81□□□□□ -2.12
SDCBPP3-201ENST00000419629 TLN1Q9Y490 2541 aaKnown RBP1.81□□□□□ -2.12
SDCBPP3-201ENST00000419629 DEFB135Q30KP9 77 aa1.81□□□□□ -2.12
SDCBPP3-201ENST00000419629 OTOGQ6ZRI0 2925 aa1.81□□□□□ -2.12
SDCBPP3-201ENST00000419629 ABCA2Q9BZC7 2435 aa1.81□□□□□ -2.12
SDCBPP3-201ENST00000419629 CRYBG3Q68DQ2 2970 aa1.81□□□□□ -2.12
SDCBPP3-201ENST00000419629 ADGRG4Q8IZF6 3080 aa1.81□□□□□ -2.12
SDCBPP3-201ENST00000419629 BOD1L1Q8NFC6 3051 aa1.81□□□□□ -2.12
SDCBPP3-201ENST00000419629 PDZD2O15018 2839 aa1.81□□□□□ -2.12
SDCBPP3-201ENST00000419629 AKAP6Q13023 2319 aa1.8□□□□□ -2.12
SDCBPP3-201ENST00000419629 F8P00451 2351 aa1.8□□□□□ -2.12
SDCBPP3-201ENST00000419629 LRRK2Q5S007 2527 aa1.8□□□□□ -2.12
SDCBPP3-201ENST00000419629 A0A1B0GU33 70 aa1.8□□□□□ -2.12
SDCBPP3-201ENST00000419629 H0YAA0 97 aa1.8□□□□□ -2.12
SDCBPP3-201ENST00000419629 PSORS1C2Q9UIG4 136 aa1.8□□□□□ -2.12
SDCBPP3-201ENST00000419629 HIVEP2P31629 2446 aa1.8□□□□□ -2.12
SDCBPP3-201ENST00000419629 AKAP9Q99996 3911 aa1.79□□□□□ -2.12
SDCBPP3-201ENST00000419629 USP9YO00507 2555 aaPredicted RBP1.79□□□□□ -2.12
SDCBPP3-201ENST00000419629 FBN1P35555 2871 aaKnown RBP1.79□□□□□ -2.12
SDCBPP3-201ENST00000419629 DEFB4AO15263 64 aa1.79□□□□□ -2.12
SDCBPP3-201ENST00000419629 H1FX-AS1Q4G0G2 97 aa1.79□□□□□ -2.12
SDCBPP3-201ENST00000419629 CELSR2Q9HCU4 2923 aa1.79□□□□□ -2.12
SDCBPP3-201ENST00000419629 ALMS1Q8TCU4 4167 aa1.78□□□□□ -2.12
SDCBPP3-201ENST00000419629 A0A096LNI7 61 aa1.78□□□□□ -2.12
SDCBPP3-201ENST00000419629 K7EIL1 84 aa1.78□□□□□ -2.12
SDCBPP3-201ENST00000419629 COX6B2Q6YFQ2 88 aa1.78□□□□□ -2.12
SDCBPP3-201ENST00000419629 Q6ZSA8 131 aa1.78□□□□□ -2.12
SDCBPP3-201ENST00000419629 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.78□□□□□ -2.13
SDCBPP3-201ENST00000419629 BSNQ9UPA5 3926 aa1.77□□□□□ -2.13
SDCBPP3-201ENST00000419629 CENPEQ02224 2701 aa1.77□□□□□ -2.13
SDCBPP3-201ENST00000419629 FN1P02751 2386 aaKnown RBP1.77□□□□□ -2.13
SDCBPP3-201ENST00000419629 NIPBLQ6KC79 2804 aaeCLIP1.76□□□□□ -2.13
SDCBPP3-201ENST00000419629 HIVEP1P15822 2718 aa1.76□□□□□ -2.13
SDCBPP3-201ENST00000419629 HIVEP3Q5T1R4 2406 aa1.76□□□□□ -2.13
SDCBPP3-201ENST00000419629 NBDYA0A0U1RRE5 68 aa1.76□□□□□ -2.13
SDCBPP3-201ENST00000419629 KRTAP13-1Q8IUC0 172 aa1.76□□□□□ -2.13
SDCBPP3-201ENST00000419629 CRIPTQ9P021 101 aa1.76□□□□□ -2.13
SDCBPP3-201ENST00000419629 MTORP42345 2549 aa1.76□□□□□ -2.13
SDCBPP3-201ENST00000419629 CSMD1Q96PZ7 3565 aa1.75□□□□□ -2.13
SDCBPP3-201ENST00000419629 ATRQ13535 2644 aa1.75□□□□□ -2.13
SDCBPP3-201ENST00000419629 SPINK1P00995 79 aa1.74□□□□□ -2.13
SDCBPP3-201ENST00000419629 RPL37P61927 97 aaKnown RBP1.74□□□□□ -2.13
SDCBPP3-201ENST00000419629 SPINK6Q6UWN8 80 aa1.74□□□□□ -2.13
SDCBPP3-201ENST00000419629 NBEAL1Q6ZS30 2694 aa1.74□□□□□ -2.13
SDCBPP3-201ENST00000419629 APCP25054 2843 aa1.74□□□□□ -2.13
SDCBPP3-201ENST00000419629 JMJD1CQ15652 2540 aa1.74□□□□□ -2.13
SDCBPP3-201ENST00000419629 CIRBP-AS1Q8TBR5 109 aa1.73□□□□□ -2.13
SDCBPP3-201ENST00000419629 CSMD2Q7Z408 3487 aa1.72□□□□□ -2.13
SDCBPP3-201ENST00000419629 TPRXLQ17RH7 258 aa1.72□□□□□ -2.13
SDCBPP3-201ENST00000419629 PKD1L1Q8TDX9 2849 aa1.72□□□□□ -2.13
SDCBPP3-201ENST00000419629 STAB1Q9NY15 2570 aa1.72□□□□□ -2.13
SDCBPP3-201ENST00000419629 CCDC168Q8NDH2 2452 aa1.71□□□□□ -2.14
SDCBPP3-201ENST00000419629 CUBNO60494 3623 aa1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms