RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 MDFIQ99750 246 aa4.83□□□□□ -1.64
HMGXB4-202ENST00000418170 HYDINQ4G0P3 5121 aa4.82□□□□□ -1.64
HMGXB4-202ENST00000418170 H3BS24 57 aa4.82□□□□□ -1.64
HMGXB4-202ENST00000418170 ACYP2P14621 99 aa4.82□□□□□ -1.64
HMGXB4-202ENST00000418170 SPATA8Q6RVD6 105 aa4.81□□□□□ -1.64
HMGXB4-202ENST00000418170 ALMS1Q8TCU4 4167 aa4.81□□□□□ -1.64
HMGXB4-202ENST00000418170 K7EIL1 84 aa4.8□□□□□ -1.64
HMGXB4-202ENST00000418170 CHTF8P0CG12 524 aa4.8□□□□□ -1.64
HMGXB4-202ENST00000418170 KRTAP10-11P60412 298 aa4.8□□□□□ -1.64
HMGXB4-202ENST00000418170 DNAH6Q9C0G6 4158 aa4.8□□□□□ -1.64
HMGXB4-202ENST00000418170 KRTAP13-3Q3SY46 172 aa4.8□□□□□ -1.64
HMGXB4-202ENST00000418170 KRTAP13-1Q8IUC0 172 aa4.8□□□□□ -1.64
HMGXB4-202ENST00000418170 CDK2AP2O75956 126 aa4.8□□□□□ -1.64
HMGXB4-202ENST00000418170 KRTAP24-1Q3LI83 254 aa4.79□□□□□ -1.64
HMGXB4-202ENST00000418170 OXLD1Q5BKU9 147 aa4.79□□□□□ -1.64
HMGXB4-202ENST00000418170 NOTCH2NLQ7Z3S9 236 aa4.79□□□□□ -1.64
HMGXB4-202ENST00000418170 PKD1P98161 4303 aa4.79□□□□□ -1.64
HMGXB4-202ENST00000418170 IGLV9-49A0A0B4J1Y8 123 aa4.79□□□□□ -1.64
HMGXB4-202ENST00000418170 A0A1B0GU69 56 aa4.79□□□□□ -1.64
HMGXB4-202ENST00000418170 Q5W150 140 aa4.78□□□□□ -1.64
HMGXB4-202ENST00000418170 DNAH8Q96JB1 4490 aa4.78□□□□□ -1.64
HMGXB4-202ENST00000418170 DMAC1Q96GE9 116 aa4.78□□□□□ -1.64
HMGXB4-202ENST00000418170 DNAH11Q96DT5 4516 aa4.77□□□□□ -1.65
HMGXB4-202ENST00000418170 FAT2Q9NYQ8 4349 aa4.77□□□□□ -1.65
HMGXB4-202ENST00000418170 COL6A5A8TX70 2615 aa4.76□□□□□ -1.65
HMGXB4-202ENST00000418170 MIR22HGQ0VDD5 57 aa4.76□□□□□ -1.65
HMGXB4-202ENST00000418170 LINC00483Q53H64 154 aa4.75□□□□□ -1.65
HMGXB4-202ENST00000418170 KRTAP1-5Q9BYS1 174 aa4.75□□□□□ -1.65
HMGXB4-202ENST00000418170 NOTCH1P46531 2555 aa4.75□□□□□ -1.65
HMGXB4-202ENST00000418170 UQCR11O14957 56 aa4.75□□□□□ -1.65
HMGXB4-202ENST00000418170 DNAH17Q9UFH2 4485 aa4.74□□□□□ -1.65
HMGXB4-202ENST00000418170 CSAG1Q6PB30 78 aa4.73□□□□□ -1.65
HMGXB4-202ENST00000418170 C14orf177Q52M58 125 aa4.73□□□□□ -1.65
HMGXB4-202ENST00000418170 DNAH5Q8TE73 4624 aa4.73□□□□□ -1.65
HMGXB4-202ENST00000418170 RETNLBQ9BQ08 111 aa4.73□□□□□ -1.65
HMGXB4-202ENST00000418170 WWC2-AS2Q96NR7 200 aa4.72□□□□□ -1.65
HMGXB4-202ENST00000418170 PANO1I0J062 215 aa4.7□□□□□ -1.66
HMGXB4-202ENST00000418170 ZNF706Q9Y5V0 76 aaPredicted RBP4.7□□□□□ -1.66
HMGXB4-202ENST00000418170 SPINK6Q6UWN8 80 aa4.68□□□□□ -1.66
HMGXB4-202ENST00000418170 ZNF861PO60384 105 aa4.67□□□□□ -1.66
HMGXB4-202ENST00000418170 FAM229AH3BQW9 127 aa4.66□□□□□ -1.66
HMGXB4-202ENST00000418170 IGKV2-30P06310 120 aa4.66□□□□□ -1.66
HMGXB4-202ENST00000418170 SACSQ9NZJ4 4579 aa4.66□□□□□ -1.66
HMGXB4-202ENST00000418170 ANAPC11Q9NYG5 84 aa4.65□□□□□ -1.66
HMGXB4-202ENST00000418170 STAB2Q8WWQ8 2551 aa4.65□□□□□ -1.67
HMGXB4-202ENST00000418170 PKHD1P08F94 4074 aa4.64□□□□□ -1.67
HMGXB4-202ENST00000418170 SPACA4Q8TDM5 124 aa4.64□□□□□ -1.67
HMGXB4-202ENST00000418170 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.64□□□□□ -1.67
HMGXB4-202ENST00000418170 IGLV7-43P04211 117 aa4.63□□□□□ -1.67
HMGXB4-202ENST00000418170 UBE2DNLQ8IWF7 75 aa4.62□□□□□ -1.67
HMGXB4-202ENST00000418170 PSORS1C2Q9UIG4 136 aa4.61□□□□□ -1.67
HMGXB4-202ENST00000418170 IGLV5-52A0A0A0MRZ9 124 aa4.61□□□□□ -1.67
HMGXB4-202ENST00000418170 C1orf134Q5TEV5 83 aa4.61□□□□□ -1.67
HMGXB4-202ENST00000418170 MGAM2Q2M2H8 2515 aa4.59□□□□□ -1.67
HMGXB4-202ENST00000418170 CIRBP-AS1Q8TBR5 109 aa4.59□□□□□ -1.68
HMGXB4-202ENST00000418170 KRTAP25-1Q3LHN0 102 aa4.57□□□□□ -1.68
HMGXB4-202ENST00000418170 Q6ZRN7 208 aaPredicted RBP4.57□□□□□ -1.68
HMGXB4-202ENST00000418170 APLNQ9ULZ1 77 aa4.57□□□□□ -1.68
HMGXB4-202ENST00000418170 A8MUU9 505 aa4.57□□□□□ -1.68
HMGXB4-202ENST00000418170 IGKV2D-30A0A075B6S6 120 aa4.57□□□□□ -1.68
HMGXB4-202ENST00000418170 ROMO1P60602 79 aa4.57□□□□□ -1.68
HMGXB4-202ENST00000418170 KMT2CQ8NEZ4 4911 aaKnown RBP4.57□□□□□ -1.68
HMGXB4-202ENST00000418170 VPS13BQ7Z7G8 4022 aa4.55□□□□□ -1.68
HMGXB4-202ENST00000418170 KRTAP16-1A8MUX0 517 aa4.55□□□□□ -1.68
HMGXB4-202ENST00000418170 TGP01266 2768 aa4.55□□□□□ -1.68
HMGXB4-202ENST00000418170 NBDYA0A0U1RRE5 68 aa4.55□□□□□ -1.68
HMGXB4-202ENST00000418170 LY6G6CO95867 125 aa4.54□□□□□ -1.68
HMGXB4-202ENST00000418170 SSBP3-AS1Q7Z2R9 100 aa4.54□□□□□ -1.68
HMGXB4-202ENST00000418170 LRP1BQ9NZR2 4599 aa4.54□□□□□ -1.68
HMGXB4-202ENST00000418170 H0YAA0 97 aa4.53□□□□□ -1.68
HMGXB4-202ENST00000418170 LINC00304Q8N9R0 145 aa4.53□□□□□ -1.68
HMGXB4-202ENST00000418170 Q6ZSA8 131 aa4.52□□□□□ -1.69
HMGXB4-202ENST00000418170 SPINK1P00995 79 aa4.51□□□□□ -1.69
HMGXB4-202ENST00000418170 RYR2Q92736 4967 aa4.51□□□□□ -1.69
HMGXB4-202ENST00000418170 A0A087WTM6 91 aa4.49□□□□□ -1.69
HMGXB4-202ENST00000418170 RYR3Q15413 4870 aa4.49□□□□□ -1.69
HMGXB4-202ENST00000418170 Q8N1X5 172 aa4.47□□□□□ -1.69
HMGXB4-202ENST00000418170 A0A1B0GU33 70 aa4.45□□□□□ -1.7
HMGXB4-202ENST00000418170 TYMSOSQ8TAI1 123 aa4.45□□□□□ -1.7
HMGXB4-202ENST00000418170 APOBP04114 4563 aaKnown RBP4.44□□□□□ -1.7
HMGXB4-202ENST00000418170 P0C880 135 aa4.44□□□□□ -1.7
HMGXB4-202ENST00000418170 PKHD1L1Q86WI1 4243 aa4.44□□□□□ -1.7
HMGXB4-202ENST00000418170 KRTAP13-2Q52LG2 175 aa4.43□□□□□ -1.7
HMGXB4-202ENST00000418170 H1FX-AS1Q4G0G2 97 aa4.42□□□□□ -1.7
HMGXB4-202ENST00000418170 FLG2Q5D862 2391 aaPredicted RBP4.4□□□□□ -1.7
HMGXB4-202ENST00000418170 CRIPTQ9P021 101 aa4.4□□□□□ -1.71
HMGXB4-202ENST00000418170 DYNC1H1Q14204 4646 aaKnown RBP4.4□□□□□ -1.71
HMGXB4-202ENST00000418170 NUPR2A6NF83 97 aa4.39□□□□□ -1.71
HMGXB4-202ENST00000418170 K7ERS5 55 aa4.38□□□□□ -1.71
HMGXB4-202ENST00000418170 KRTAP3-1Q9BYR8 98 aa4.34□□□□□ -1.71
HMGXB4-202ENST00000418170 KRTAP1-4P0C5Y4 121 aa4.33□□□□□ -1.72
HMGXB4-202ENST00000418170 COX6B2Q6YFQ2 88 aa4.32□□□□□ -1.72
HMGXB4-202ENST00000418170 FAT1Q14517 4588 aa4.32□□□□□ -1.72
HMGXB4-202ENST00000418170 KRTAP21-3Q3LHN1 58 aa4.31□□□□□ -1.72
HMGXB4-202ENST00000418170 HSPG2P98160 4391 aa4.31□□□□□ -1.72
HMGXB4-202ENST00000418170 FAT3Q8TDW7 4589 aa4.3□□□□□ -1.72
HMGXB4-202ENST00000418170 TNXBP22105 4242 aa4.3□□□□□ -1.72
HMGXB4-202ENST00000418170 SPINT4Q6UDR6 99 aa4.29□□□□□ -1.72
HMGXB4-202ENST00000418170 TPRXLQ17RH7 258 aa4.28□□□□□ -1.72
HMGXB4-202ENST00000418170 EPPK1P58107 5090 aaKnown RBP4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 125.8 ms