RNA–Protein interactions for RNA: ENST00000417478.6

RUFY3-203, Transcript of RUN and FYVE domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene RUFY3, Length 2,143 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY3-203ENST00000417478 WFDC13Q8IUB5 93 aa11.68□□□□□ -0.54
RUFY3-203ENST00000417478 KRTAP29-1A8MX34 341 aaPredicted RBP11.67□□□□□ -0.54
RUFY3-203ENST00000417478 FAT3Q8TDW7 4589 aa11.67□□□□□ -0.54
RUFY3-203ENST00000417478 ABCA13Q86UQ4 5058 aa11.65□□□□□ -0.54
RUFY3-203ENST00000417478 CASC2Q6XLA1 102 aa11.65□□□□□ -0.54
RUFY3-203ENST00000417478 TYMSOSQ8TAI1 123 aa11.63□□□□□ -0.55
RUFY3-203ENST00000417478 TMEM254Q8TBM7 123 aa11.63□□□□□ -0.55
RUFY3-203ENST00000417478 ASB16-AS1Q495Z4 193 aa11.62□□□□□ -0.55
RUFY3-203ENST00000417478 MMP24-AS1A0A0U1RRL7 71 aa11.62□□□□□ -0.55
RUFY3-203ENST00000417478 TMEM258P61165 79 aa11.62□□□□□ -0.55
RUFY3-203ENST00000417478 TNXBP22105 4242 aa11.61□□□□□ -0.55
RUFY3-203ENST00000417478 SNURFQ9Y675 71 aa11.6□□□□□ -0.55
RUFY3-203ENST00000417478 A0A1B0GVX0 72 aa11.59□□□□□ -0.55
RUFY3-203ENST00000417478 Q5XG85 94 aa11.57□□□□□ -0.56
RUFY3-203ENST00000417478 A0A0U1RQV1 116 aa11.57□□□□□ -0.56
RUFY3-203ENST00000417478 NDUFC1O43677 76 aa11.56□□□□□ -0.56
RUFY3-203ENST00000417478 C8orf17Q9NRJ1 99 aa11.56□□□□□ -0.56
RUFY3-203ENST00000417478 hDV103S1A0JD37 113 aa11.56□□□□□ -0.56
RUFY3-203ENST00000417478 H7BZZ5 65 aa11.55□□□□□ -0.56
RUFY3-203ENST00000417478 C5orf47Q569G3 176 aa11.55□□□□□ -0.56
RUFY3-203ENST00000417478 IGHV6-1A0A0B4J1U7 121 aa11.54□□□□□ -0.56
RUFY3-203ENST00000417478 LIMD2Q9BT23 127 aa11.51□□□□□ -0.57
RUFY3-203ENST00000417478 LINC00304Q8N9R0 145 aa11.5□□□□□ -0.57
RUFY3-203ENST00000417478 KRTAP10-8P60410 259 aa11.48□□□□□ -0.57
RUFY3-203ENST00000417478 C4orf48Q5BLP8 95 aa11.48□□□□□ -0.57
RUFY3-203ENST00000417478 SPINK1P00995 79 aa11.45□□□□□ -0.58
RUFY3-203ENST00000417478 C1orf195Q5TG92 126 aa11.45□□□□□ -0.58
RUFY3-203ENST00000417478 MP68P56378 58 aa11.45□□□□□ -0.58
RUFY3-203ENST00000417478 ZCCHC13Q8WW36 166 aaKnown RBP11.44□□□□□ -0.58
RUFY3-203ENST00000417478 DMBT1Q9UGM3 2413 aaPredicted RBP11.44□□□□□ -0.58
RUFY3-203ENST00000417478 FAM236DA0A1B0GTK5 79 aa11.44□□□□□ -0.58
RUFY3-203ENST00000417478 FAM236CP0DP71 79 aa11.44□□□□□ -0.58
RUFY3-203ENST00000417478 MRPL34Q9BQ48 92 aaKnown RBP11.43□□□□□ -0.58
RUFY3-203ENST00000417478 TP53AIP1Q9HCN2 124 aa11.43□□□□□ -0.58
RUFY3-203ENST00000417478 C8orf87E5RJ46 101 aa11.42□□□□□ -0.58
RUFY3-203ENST00000417478 MT1HL1P0DM35 61 aa11.42□□□□□ -0.58
RUFY3-203ENST00000417478 NOTCH2NLQ7Z3S9 236 aa11.42□□□□□ -0.58
RUFY3-203ENST00000417478 H0Y9P7 68 aa11.4□□□□□ -0.58
RUFY3-203ENST00000417478 H3BPC8 53 aa11.4□□□□□ -0.58
RUFY3-203ENST00000417478 RPS29P62273 56 aaKnown RBP11.39□□□□□ -0.59
RUFY3-203ENST00000417478 SPAG11AQ6PDA7 123 aa11.39□□□□□ -0.59
RUFY3-203ENST00000417478 PCLOQ9Y6V0 5065 aa11.38□□□□□ -0.59
RUFY3-203ENST00000417478 ATP5EP56381 51 aaPredicted RBP11.37□□□□□ -0.59
RUFY3-203ENST00000417478 TRAV22A0A0B4J277 110 aa11.36□□□□□ -0.59
RUFY3-203ENST00000417478 OXTP01178 125 aa11.36□□□□□ -0.59
RUFY3-203ENST00000417478 RPS28P62857 69 aaKnown RBP11.36□□□□□ -0.59
RUFY3-203ENST00000417478 NDUFS5O43920 106 aa11.35□□□□□ -0.59
RUFY3-203ENST00000417478 LINC00208Q96KT6 92 aa11.35□□□□□ -0.59
RUFY3-203ENST00000417478 LINC00313P59037 77 aa11.32□□□□□ -0.6
RUFY3-203ENST00000417478 C1orf64Q8NEQ6 169 aa11.29□□□□□ -0.6
RUFY3-203ENST00000417478 RETNLBQ9BQ08 111 aa11.26□□□□□ -0.61
RUFY3-203ENST00000417478 SERP1Q9Y6X1 66 aa11.26□□□□□ -0.61
RUFY3-203ENST00000417478 Q8N9P0 234 aaPredicted RBP11.22□□□□□ -0.61
RUFY3-203ENST00000417478 KRTAP16-1A8MUX0 517 aa11.2□□□□□ -0.62
RUFY3-203ENST00000417478 J3QL48 77 aa11.18□□□□□ -0.62
RUFY3-203ENST00000417478 KRTAP13-3Q3SY46 172 aa11.16□□□□□ -0.62
RUFY3-203ENST00000417478 SPANXA2-OT1Q8N9U9 137 aa11.15□□□□□ -0.62
RUFY3-203ENST00000417478 Q5W150 140 aa11.15□□□□□ -0.62
RUFY3-203ENST00000417478 CYP4F30PQ9H0H9 118 aa11.14□□□□□ -0.63
RUFY3-203ENST00000417478 LOC101927531A0A1B0GV80 90 aa11.12□□□□□ -0.63
RUFY3-203ENST00000417478 PRR4Q16378 134 aa11.06□□□□□ -0.64
RUFY3-203ENST00000417478 PCOTHQ58A44 107 aa11.06□□□□□ -0.64
RUFY3-203ENST00000417478 HERC1Q15751 4861 aa11.05□□□□□ -0.64
RUFY3-203ENST00000417478 IGLV7-46A0A075B6I9 117 aa11.04□□□□□ -0.64
RUFY3-203ENST00000417478 C9orf92A6NGG3 77 aa11□□□□□ -0.65
RUFY3-203ENST00000417478 SMIM26A0A096LP01 95 aa11□□□□□ -0.65
RUFY3-203ENST00000417478 FP248Q71RG6 208 aaPredicted RBP11□□□□□ -0.65
RUFY3-203ENST00000417478 IGKV2-30P06310 120 aa10.96□□□□□ -0.66
RUFY3-203ENST00000417478 LPAP08519 4548 aa10.93□□□□□ -0.66
RUFY3-203ENST00000417478 C20orf166-AS1Q96NR2 134 aa10.91□□□□□ -0.66
RUFY3-203ENST00000417478 A8MUU9 505 aa10.9□□□□□ -0.67
RUFY3-203ENST00000417478 HRES1P13985 223 aa10.85□□□□□ -0.67
RUFY3-203ENST00000417478 IGKV2D-30A0A075B6S6 120 aa10.84□□□□□ -0.67
RUFY3-203ENST00000417478 COA5Q86WW8 74 aa10.82□□□□□ -0.68
RUFY3-203ENST00000417478 LRP2P98164 4655 aa10.82□□□□□ -0.68
RUFY3-203ENST00000417478 HMCN2Q8NDA2 5059 aa10.81□□□□□ -0.68
RUFY3-203ENST00000417478 TPRXLQ17RH7 258 aa10.79□□□□□ -0.68
RUFY3-203ENST00000417478 XP32Q5T750 250 aa10.78□□□□□ -0.68
RUFY3-203ENST00000417478 C7orf65Q6ZTY9 151 aa10.78□□□□□ -0.68
RUFY3-203ENST00000417478 C4orf26Q17RF5 130 aa10.77□□□□□ -0.69
RUFY3-203ENST00000417478 Q75L30 129 aa10.77□□□□□ -0.69
RUFY3-203ENST00000417478 MPLKIPQ8TAP9 179 aa10.75□□□□□ -0.69
RUFY3-203ENST00000417478 DMAC1Q96GE9 116 aa10.75□□□□□ -0.69
RUFY3-203ENST00000417478 ACYP2P14621 99 aa10.72□□□□□ -0.69
RUFY3-203ENST00000417478 Q1T7F1 81 aa10.72□□□□□ -0.69
RUFY3-203ENST00000417478 V9GYY9 64 aa10.67□□□□□ -0.7
RUFY3-203ENST00000417478 RPL37P61927 97 aaKnown RBP10.66□□□□□ -0.7
RUFY3-203ENST00000417478 ATP11AUNQ6ZP68 121 aa10.6□□□□□ -0.71
RUFY3-203ENST00000417478 SPINK7P58062 85 aa10.58□□□□□ -0.72
RUFY3-203ENST00000417478 CHKB-CPT1BH3BT56 60 aa10.57□□□□□ -0.72
RUFY3-203ENST00000417478 A8MUN3 132 aa10.56□□□□□ -0.72
RUFY3-203ENST00000417478 PSPHP1O15172 72 aa10.49□□□□□ -0.73
RUFY3-203ENST00000417478 LINC01558Q9Y6Z2 57 aa10.48□□□□□ -0.73
RUFY3-203ENST00000417478 PRR15LQ9BU68 103 aa10.44□□□□□ -0.74
RUFY3-203ENST00000417478 MUC17Q685J3 4493 aa10.44□□□□□ -0.74
RUFY3-203ENST00000417478 SEC61BP60468 96 aaKnown RBP10.42□□□□□ -0.74
RUFY3-203ENST00000417478 UBR4Q5T4S7 5183 aa10.41□□□□□ -0.74
RUFY3-203ENST00000417478 Q5VV11 94 aa10.41□□□□□ -0.74
RUFY3-203ENST00000417478 KRTAP3-1Q9BYR8 98 aa10.39□□□□□ -0.75
RUFY3-203ENST00000417478 COX6B2Q6YFQ2 88 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms