RNA–Protein interactions for RNA: ENST00000417172.5

CALD1-204, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 1,915 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-204ENST00000417172 FAM236CP0DP71 79 aa9.78□□□□□ -0.84
CALD1-204ENST00000417172 CYSTM1Q9H1C7 97 aa9.78□□□□□ -0.84
CALD1-204ENST00000417172 SMIM26A0A096LP01 95 aa9.78□□□□□ -0.84
CALD1-204ENST00000417172 LINC00304Q8N9R0 145 aa9.76□□□□□ -0.85
CALD1-204ENST00000417172 C1orf195Q5TG92 126 aa9.74□□□□□ -0.85
CALD1-204ENST00000417172 KRTAP4-5Q9BYR2 181 aa9.74□□□□□ -0.85
CALD1-204ENST00000417172 TNXBP22105 4242 aa9.74□□□□□ -0.85
CALD1-204ENST00000417172 MYCBP2O75592 4640 aa9.74□□□□□ -0.85
CALD1-204ENST00000417172 C4orf48Q5BLP8 95 aa9.74□□□□□ -0.85
CALD1-204ENST00000417172 FAT3Q8TDW7 4589 aa9.73□□□□□ -0.85
CALD1-204ENST00000417172 ATP5EP56381 51 aaPredicted RBP9.72□□□□□ -0.85
CALD1-204ENST00000417172 A8MWP4 228 aa9.7□□□□□ -0.86
CALD1-204ENST00000417172 SPINK1P00995 79 aa9.7□□□□□ -0.86
CALD1-204ENST00000417172 BIRC6Q9NR09 4857 aa9.69□□□□□ -0.86
CALD1-204ENST00000417172 ASB16-AS1Q495Z4 193 aa9.68□□□□□ -0.86
CALD1-204ENST00000417172 PRR15Q8IV56 129 aa9.68□□□□□ -0.86
CALD1-204ENST00000417172 LIMD2Q9BT23 127 aa9.67□□□□□ -0.86
CALD1-204ENST00000417172 NDUFC1O43677 76 aa9.66□□□□□ -0.86
CALD1-204ENST00000417172 KRTAP10-8P60410 259 aa9.66□□□□□ -0.86
CALD1-204ENST00000417172 SPAG11AQ6PDA7 123 aa9.64□□□□□ -0.87
CALD1-204ENST00000417172 IGHV6-1A0A0B4J1U7 121 aa9.64□□□□□ -0.87
CALD1-204ENST00000417172 KLKP1Q107X0 134 aa9.64□□□□□ -0.87
CALD1-204ENST00000417172 WFDC13Q8IUB5 93 aa9.63□□□□□ -0.87
CALD1-204ENST00000417172 A0A1B0GVX0 72 aa9.62□□□□□ -0.87
CALD1-204ENST00000417172 HCG22E2RYF7 251 aa9.62□□□□□ -0.87
CALD1-204ENST00000417172 H7BZZ5 65 aa9.62□□□□□ -0.87
CALD1-204ENST00000417172 NOTCH2NLQ7Z3S9 236 aa9.62□□□□□ -0.87
CALD1-204ENST00000417172 NDUFB1O75438 58 aa9.61□□□□□ -0.87
CALD1-204ENST00000417172 TRAV7A0A075B6U4 112 aa9.6□□□□□ -0.87
CALD1-204ENST00000417172 RPS29P62273 56 aaKnown RBP9.6□□□□□ -0.87
CALD1-204ENST00000417172 MMP24-AS1A0A0U1RRL7 71 aa9.59□□□□□ -0.87
CALD1-204ENST00000417172 MT1HL1P0DM35 61 aa9.59□□□□□ -0.87
CALD1-204ENST00000417172 ABCA13Q86UQ4 5058 aa9.59□□□□□ -0.87
CALD1-204ENST00000417172 FP248Q71RG6 208 aaPredicted RBP9.58□□□□□ -0.88
CALD1-204ENST00000417172 C20orf197Q8N268 126 aa9.58□□□□□ -0.88
CALD1-204ENST00000417172 RETNLBQ9BQ08 111 aa9.58□□□□□ -0.88
CALD1-204ENST00000417172 HERC2O95714 4834 aa9.58□□□□□ -0.88
CALD1-204ENST00000417172 C8orf17Q9NRJ1 99 aa9.56□□□□□ -0.88
CALD1-204ENST00000417172 KRTAP29-1A8MX34 341 aaPredicted RBP9.56□□□□□ -0.88
CALD1-204ENST00000417172 CASC2Q6XLA1 102 aa9.56□□□□□ -0.88
CALD1-204ENST00000417172 BRK1Q8WUW1 75 aa9.56□□□□□ -0.88
CALD1-204ENST00000417172 DMBT1Q9UGM3 2413 aaPredicted RBP9.56□□□□□ -0.88
CALD1-204ENST00000417172 hDV103S1A0JD37 113 aa9.52□□□□□ -0.89
CALD1-204ENST00000417172 PMAIP1Q13794 54 aa9.49□□□□□ -0.89
CALD1-204ENST00000417172 OCR1Q9BZK8 76 aa9.49□□□□□ -0.89
CALD1-204ENST00000417172 LINC00313P59037 77 aa9.46□□□□□ -0.9
CALD1-204ENST00000417172 A0A0U1RQV1 116 aa9.45□□□□□ -0.9
CALD1-204ENST00000417172 C8orf87E5RJ46 101 aa9.43□□□□□ -0.9
CALD1-204ENST00000417172 MRPL34Q9BQ48 92 aaKnown RBP9.43□□□□□ -0.9
CALD1-204ENST00000417172 TMEM254Q8TBM7 123 aa9.42□□□□□ -0.9
CALD1-204ENST00000417172 KRTAP16-1A8MUX0 517 aa9.41□□□□□ -0.9
CALD1-204ENST00000417172 C9orf92A6NGG3 77 aa9.41□□□□□ -0.9
CALD1-204ENST00000417172 NDUFS5O43920 106 aa9.41□□□□□ -0.9
CALD1-204ENST00000417172 SNURFQ9Y675 71 aa9.33□□□□□ -0.92
CALD1-204ENST00000417172 Q8N9P0 234 aaPredicted RBP9.31□□□□□ -0.92
CALD1-204ENST00000417172 PCLOQ9Y6V0 5065 aa9.31□□□□□ -0.92
CALD1-204ENST00000417172 J3QL48 77 aa9.29□□□□□ -0.92
CALD1-204ENST00000417172 IGLV7-46A0A075B6I9 117 aa9.28□□□□□ -0.92
CALD1-204ENST00000417172 Q1T7F1 81 aa9.28□□□□□ -0.92
CALD1-204ENST00000417172 Q5W150 140 aa9.28□□□□□ -0.92
CALD1-204ENST00000417172 H0Y9P7 68 aa9.27□□□□□ -0.93
CALD1-204ENST00000417172 TP53AIP1Q9HCN2 124 aa9.27□□□□□ -0.93
CALD1-204ENST00000417172 PRR4Q16378 134 aa9.27□□□□□ -0.93
CALD1-204ENST00000417172 TRAV22A0A0B4J277 110 aa9.26□□□□□ -0.93
CALD1-204ENST00000417172 MPLKIPQ8TAP9 179 aa9.26□□□□□ -0.93
CALD1-204ENST00000417172 LINC00208Q96KT6 92 aa9.23□□□□□ -0.93
CALD1-204ENST00000417172 KRTAP13-3Q3SY46 172 aa9.22□□□□□ -0.93
CALD1-204ENST00000417172 MP68P56378 58 aa9.21□□□□□ -0.93
CALD1-204ENST00000417172 ZCCHC13Q8WW36 166 aaKnown RBP9.19□□□□□ -0.94
CALD1-204ENST00000417172 C20orf166-AS1Q96NR2 134 aa9.19□□□□□ -0.94
CALD1-204ENST00000417172 A8MUU9 505 aa9.18□□□□□ -0.94
CALD1-204ENST00000417172 LPAP08519 4548 aa9.18□□□□□ -0.94
CALD1-204ENST00000417172 C1orf64Q8NEQ6 169 aa9.17□□□□□ -0.94
CALD1-204ENST00000417172 XP32Q5T750 250 aa9.14□□□□□ -0.95
CALD1-204ENST00000417172 KTN1-AS1Q86SY8 53 aa9.14□□□□□ -0.95
CALD1-204ENST00000417172 H3BPC8 53 aa9.11□□□□□ -0.95
CALD1-204ENST00000417172 Q75L30 129 aa9.11□□□□□ -0.95
CALD1-204ENST00000417172 TPRXLQ17RH7 258 aa9.08□□□□□ -0.96
CALD1-204ENST00000417172 PCOTHQ58A44 107 aa9.08□□□□□ -0.96
CALD1-204ENST00000417172 LRP2P98164 4655 aa9.07□□□□□ -0.96
CALD1-204ENST00000417172 CYP4F30PQ9H0H9 118 aa9.07□□□□□ -0.96
CALD1-204ENST00000417172 HERC1Q15751 4861 aa9.07□□□□□ -0.96
CALD1-204ENST00000417172 RPL37P61927 97 aaKnown RBP9.05□□□□□ -0.96
CALD1-204ENST00000417172 IGKV2D-30A0A075B6S6 120 aa9.05□□□□□ -0.96
CALD1-204ENST00000417172 IGKV2-30P06310 120 aa9.05□□□□□ -0.96
CALD1-204ENST00000417172 RBM12B-AS1Q9P1G2 102 aa9.05□□□□□ -0.96
CALD1-204ENST00000417172 LOC101927531A0A1B0GV80 90 aa9.04□□□□□ -0.96
CALD1-204ENST00000417172 ATP11AUNQ6ZP68 121 aa8.99□□□□□ -0.97
CALD1-204ENST00000417172 C7orf65Q6ZTY9 151 aa8.94□□□□□ -0.98
CALD1-204ENST00000417172 PSPHP1O15172 72 aa8.93□□□□□ -0.98
CALD1-204ENST00000417172 HRES1P13985 223 aa8.92□□□□□ -0.98
CALD1-204ENST00000417172 SPINK7P58062 85 aa8.92□□□□□ -0.98
CALD1-204ENST00000417172 Q5VV11 94 aa8.92□□□□□ -0.98
CALD1-204ENST00000417172 HMCN2Q8NDA2 5059 aa8.89□□□□□ -0.99
CALD1-204ENST00000417172 A8MUN3 132 aa8.88□□□□□ -0.99
CALD1-204ENST00000417172 SPANXA2-OT1Q8N9U9 137 aa8.88□□□□□ -0.99
CALD1-204ENST00000417172 A6NN06 94 aa8.86□□□□□ -0.99
CALD1-204ENST00000417172 LCA10Q71F78 164 aa8.84□□□□□ -0.99
CALD1-204ENST00000417172 CHKB-CPT1BH3BT56 60 aa8.83□□□□□ -1
CALD1-204ENST00000417172 CDC42SE1Q9NRR8 79 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms