RNA–Protein interactions for RNA: ENST00000416918.5

TRAPPC12-205, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 473 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-205ENST00000416918 MRPL34Q9BQ48 92 aaKnown RBP6.43□□□□□ -1.38
TRAPPC12-205ENST00000416918 CYSTM1Q9H1C7 97 aa6.43□□□□□ -1.38
TRAPPC12-205ENST00000416918 SERP1Q9Y6X1 66 aa6.42□□□□□ -1.38
TRAPPC12-205ENST00000416918 TRAV22A0A0B4J277 110 aa6.41□□□□□ -1.38
TRAPPC12-205ENST00000416918 H0Y9P7 68 aa6.4□□□□□ -1.38
TRAPPC12-205ENST00000416918 FAT2Q9NYQ8 4349 aa6.4□□□□□ -1.39
TRAPPC12-205ENST00000416918 FAM229AH3BQW9 127 aa6.39□□□□□ -1.39
TRAPPC12-205ENST00000416918 C1orf195Q5TG92 126 aa6.39□□□□□ -1.39
TRAPPC12-205ENST00000416918 PKD1P98161 4303 aa6.39□□□□□ -1.39
TRAPPC12-205ENST00000416918 DNAH5Q8TE73 4624 aa6.38□□□□□ -1.39
TRAPPC12-205ENST00000416918 LINC00313P59037 77 aa6.38□□□□□ -1.39
TRAPPC12-205ENST00000416918 LINC00304Q8N9R0 145 aa6.38□□□□□ -1.39
TRAPPC12-205ENST00000416918 SPANXA2-OT1Q8N9U9 137 aa6.37□□□□□ -1.39
TRAPPC12-205ENST00000416918 LINC00208Q96KT6 92 aa6.37□□□□□ -1.39
TRAPPC12-205ENST00000416918 C1orf64Q8NEQ6 169 aa6.36□□□□□ -1.39
TRAPPC12-205ENST00000416918 NDUFS5O43920 106 aa6.34□□□□□ -1.39
TRAPPC12-205ENST00000416918 HYDINQ4G0P3 5121 aa6.34□□□□□ -1.39
TRAPPC12-205ENST00000416918 LOC101927531A0A1B0GV80 90 aa6.33□□□□□ -1.4
TRAPPC12-205ENST00000416918 SMR3BP02814 79 aaPredicted RBP6.33□□□□□ -1.4
TRAPPC12-205ENST00000416918 KRTAP10-4P60372 401 aaPredicted RBP6.33□□□□□ -1.4
TRAPPC12-205ENST00000416918 CYP4F30PQ9H0H9 118 aa6.33□□□□□ -1.4
TRAPPC12-205ENST00000416918 SACSQ9NZJ4 4579 aa6.33□□□□□ -1.4
TRAPPC12-205ENST00000416918 Q8N9P0 234 aaPredicted RBP6.32□□□□□ -1.4
TRAPPC12-205ENST00000416918 PRR26Q8N8Z3 221 aa6.31□□□□□ -1.4
TRAPPC12-205ENST00000416918 LRP1BQ9NZR2 4599 aa6.3□□□□□ -1.4
TRAPPC12-205ENST00000416918 SMIM26A0A096LP01 95 aa6.29□□□□□ -1.4
TRAPPC12-205ENST00000416918 NOTCH2NLQ7Z3S9 236 aa6.27□□□□□ -1.41
TRAPPC12-205ENST00000416918 IGLV7-46A0A075B6I9 117 aa6.26□□□□□ -1.41
TRAPPC12-205ENST00000416918 RYR2Q92736 4967 aa6.26□□□□□ -1.41
TRAPPC12-205ENST00000416918 VPS13BQ7Z7G8 4022 aa6.25□□□□□ -1.41
TRAPPC12-205ENST00000416918 DYNC1H1Q14204 4646 aaKnown RBP6.24□□□□□ -1.41
TRAPPC12-205ENST00000416918 KRTAP13-3Q3SY46 172 aa6.23□□□□□ -1.41
TRAPPC12-205ENST00000416918 KRTAP16-1A8MUX0 517 aa6.22□□□□□ -1.41
TRAPPC12-205ENST00000416918 PKHD1P08F94 4074 aa6.2□□□□□ -1.42
TRAPPC12-205ENST00000416918 Q5VSD8 79 aa6.2□□□□□ -1.42
TRAPPC12-205ENST00000416918 KRTAP10-8P60410 259 aa6.18□□□□□ -1.42
TRAPPC12-205ENST00000416918 FP248Q71RG6 208 aaPredicted RBP6.18□□□□□ -1.42
TRAPPC12-205ENST00000416918 V9GYY9 64 aa6.18□□□□□ -1.42
TRAPPC12-205ENST00000416918 OXTP01178 125 aa6.17□□□□□ -1.42
TRAPPC12-205ENST00000416918 Q5W150 140 aa6.17□□□□□ -1.42
TRAPPC12-205ENST00000416918 IGKV2-30P06310 120 aa6.16□□□□□ -1.42
TRAPPC12-205ENST00000416918 PCOTHQ58A44 107 aa6.14□□□□□ -1.43
TRAPPC12-205ENST00000416918 Q8N1X5 172 aa6.14□□□□□ -1.43
TRAPPC12-205ENST00000416918 C20orf166-AS1Q96NR2 134 aa6.14□□□□□ -1.43
TRAPPC12-205ENST00000416918 APOBP04114 4563 aaKnown RBP6.13□□□□□ -1.43
TRAPPC12-205ENST00000416918 A8MUU9 505 aa6.12□□□□□ -1.43
TRAPPC12-205ENST00000416918 ACYP2P14621 99 aa6.12□□□□□ -1.43
TRAPPC12-205ENST00000416918 Q1T7F1 81 aa6.11□□□□□ -1.43
TRAPPC12-205ENST00000416918 KMT2CQ8NEZ4 4911 aaKnown RBP6.1□□□□□ -1.43
TRAPPC12-205ENST00000416918 PRR4Q16378 134 aa6.1□□□□□ -1.43
TRAPPC12-205ENST00000416918 C7orf65Q6ZTY9 151 aa6.09□□□□□ -1.43
TRAPPC12-205ENST00000416918 Q75L30 129 aa6.08□□□□□ -1.44
TRAPPC12-205ENST00000416918 COA5Q86WW8 74 aa6.08□□□□□ -1.44
TRAPPC12-205ENST00000416918 DMAC1Q96GE9 116 aa6.07□□□□□ -1.44
TRAPPC12-205ENST00000416918 A8MUN3 132 aa6.06□□□□□ -1.44
TRAPPC12-205ENST00000416918 HRES1P13985 223 aa6.06□□□□□ -1.44
TRAPPC12-205ENST00000416918 PKHD1L1Q86WI1 4243 aa6.03□□□□□ -1.44
TRAPPC12-205ENST00000416918 IGKV2D-30A0A075B6S6 120 aa6.03□□□□□ -1.44
TRAPPC12-205ENST00000416918 FLG2Q5D862 2391 aaPredicted RBP6.02□□□□□ -1.45
TRAPPC12-205ENST00000416918 C4orf26Q17RF5 130 aa6.01□□□□□ -1.45
TRAPPC12-205ENST00000416918 RETNLBQ9BQ08 111 aa6.01□□□□□ -1.45
TRAPPC12-205ENST00000416918 FAT1Q14517 4588 aa6.01□□□□□ -1.45
TRAPPC12-205ENST00000416918 C9orf92A6NGG3 77 aa6□□□□□ -1.45
TRAPPC12-205ENST00000416918 MPLKIPQ8TAP9 179 aa6□□□□□ -1.45
TRAPPC12-205ENST00000416918 CHKB-CPT1BH3BT56 60 aa5.99□□□□□ -1.45
TRAPPC12-205ENST00000416918 ATP11AUNQ6ZP68 121 aa5.98□□□□□ -1.45
TRAPPC12-205ENST00000416918 RYR1P21817 5038 aa5.98□□□□□ -1.45
TRAPPC12-205ENST00000416918 MT1HL1P0DM35 61 aa5.96□□□□□ -1.46
TRAPPC12-205ENST00000416918 SPTSSBQ8NFR3 76 aa5.95□□□□□ -1.46
TRAPPC12-205ENST00000416918 LINC01558Q9Y6Z2 57 aa5.95□□□□□ -1.46
TRAPPC12-205ENST00000416918 HSPG2P98160 4391 aa5.94□□□□□ -1.46
TRAPPC12-205ENST00000416918 SPINK7P58062 85 aa5.93□□□□□ -1.46
TRAPPC12-205ENST00000416918 RPL37P61927 97 aaKnown RBP5.93□□□□□ -1.46
TRAPPC12-205ENST00000416918 DMBT1Q9UGM3 2413 aaPredicted RBP5.92□□□□□ -1.46
TRAPPC12-205ENST00000416918 RYR3Q15413 4870 aa5.92□□□□□ -1.46
TRAPPC12-205ENST00000416918 TPRXLQ17RH7 258 aa5.9□□□□□ -1.46
TRAPPC12-205ENST00000416918 PRR15LQ9BU68 103 aa5.9□□□□□ -1.46
TRAPPC12-205ENST00000416918 XP32Q5T750 250 aa5.87□□□□□ -1.47
TRAPPC12-205ENST00000416918 PSPHP1O15172 72 aa5.86□□□□□ -1.47
TRAPPC12-205ENST00000416918 KRTAP17-1Q9BYP8 105 aa5.86□□□□□ -1.47
TRAPPC12-205ENST00000416918 PRO0628Q9UI54 55 aa5.86□□□□□ -1.47
TRAPPC12-205ENST00000416918 COX6B2Q6YFQ2 88 aa5.85□□□□□ -1.47
TRAPPC12-205ENST00000416918 Q5VV11 94 aa5.84□□□□□ -1.47
TRAPPC12-205ENST00000416918 TNXBP22105 4242 aa5.83□□□□□ -1.48
TRAPPC12-205ENST00000416918 KIAA1109Q2LD37 5005 aa5.82□□□□□ -1.48
TRAPPC12-205ENST00000416918 SVIPQ8NHG7 77 aa5.81□□□□□ -1.48
TRAPPC12-205ENST00000416918 SEC61GP60059 68 aa5.8□□□□□ -1.48
TRAPPC12-205ENST00000416918 BRK1Q8WUW1 75 aa5.8□□□□□ -1.48
TRAPPC12-205ENST00000416918 A0A1B0GU69 56 aa5.79□□□□□ -1.48
TRAPPC12-205ENST00000416918 J3QL48 77 aa5.78□□□□□ -1.48
TRAPPC12-205ENST00000416918 FAT3Q8TDW7 4589 aa5.78□□□□□ -1.48
TRAPPC12-205ENST00000416918 A6NED7 52 aa5.76□□□□□ -1.49
TRAPPC12-205ENST00000416918 LRP1Q07954 4544 aaKnown RBP5.76□□□□□ -1.49
TRAPPC12-205ENST00000416918 SEC61BP60468 96 aaKnown RBP5.74□□□□□ -1.49
TRAPPC12-205ENST00000416918 KRTAP3-1Q9BYR8 98 aa5.74□□□□□ -1.49
TRAPPC12-205ENST00000416918 KRTAP4-5Q9BYR2 181 aa5.72□□□□□ -1.49
TRAPPC12-205ENST00000416918 CDC42SE1Q9NRR8 79 aa5.72□□□□□ -1.49
TRAPPC12-205ENST00000416918 UQCR11O14957 56 aa5.7□□□□□ -1.5
TRAPPC12-205ENST00000416918 RBM12B-AS1Q9P1G2 102 aa5.7□□□□□ -1.5
TRAPPC12-205ENST00000416918 EPPK1P58107 5090 aaKnown RBP5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms