RNA–Protein interactions for RNA: ENST00000416918.5

TRAPPC12-205, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 473 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-205ENST00000416918 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.72□□□□□ -0.531e-10■■■■■ 255.2
TRAPPC12-205ENST00000416918 FMR1Q06787 632 aaKnown RBP eCLIP12.38□□□□□ -0.432e-31■■■■■ 109.2
TRAPPC12-205ENST00000416918 SF3B1O75533 1304 aaKnown RBP eCLIP11.53□□□□□ -0.564e-8■■■■■ 68.9
TRAPPC12-205ENST00000416918 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.69□□□□□ -0.546e-6■■■■■ 55.1
TRAPPC12-205ENST00000416918 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.54□□□□□ -1.043e-27■■■■■ 41.6
TRAPPC12-205ENST00000416918 PPIGQ13427 754 aaKnown RBP eCLIP11.19□□□□□ -0.621e-7■■■■■ 28.6
TRAPPC12-205ENST00000416918 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.49□□□□□ -0.412e-6■■■■■ 28.1
TRAPPC12-205ENST00000416918 QKIQ96PU8 341 aaKnown RBP eCLIP11.46□□□□□ -0.578e-8■■■■□ 26.5
TRAPPC12-205ENST00000416918 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.55■□□□□ 0.243e-6■■■■□ 26.4
TRAPPC12-205ENST00000416918 HNRNPMP52272 730 aaKnown RBP eCLIP15.73■□□□□ 0.111e-6■■■■□ 26.1
TRAPPC12-205ENST00000416918 SF3B4Q15427 424 aaKnown RBP eCLIP9.72□□□□□ -0.853e-11■■■■□ 25
TRAPPC12-205ENST00000416918 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.83□□□□□ -0.524e-7■■■■□ 24.4
TRAPPC12-205ENST00000416918 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.93□□□□□ -0.54e-6■■■■□ 24.2
TRAPPC12-205ENST00000416918 YWHAGP61981 247 aaKnown RBP eCLIP11.4□□□□□ -0.589e-7■■■■□ 23.9
TRAPPC12-205ENST00000416918 TRA2AQ13595 282 aaKnown RBP eCLIP10.22□□□□□ -0.771e-5■■■■□ 21.3
TRAPPC12-205ENST00000416918 KHSRPQ92945 711 aaKnown RBP eCLIP11.53□□□□□ -0.566e-11■■■□□ 18.6
TRAPPC12-205ENST00000416918 SRSF9Q13242 221 aaKnown RBP eCLIP7.82□□□□□ -1.164e-7■■■□□ 16.1
TRAPPC12-205ENST00000416918 HNRNPCP07910 306 aaKnown RBP eCLIP9.9□□□□□ -0.822e-6■■■□□ 15.9
TRAPPC12-205ENST00000416918 RBM22Q9NW64 420 aaKnown RBP eCLIP11.26□□□□□ -0.612e-6■■■□□ 15.6
TRAPPC12-205ENST00000416918 HLTFQ14527 1009 aaKnown RBP eCLIP11.7□□□□□ -0.547e-7■■■□□ 15.5
TRAPPC12-205ENST00000416918 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.86□□□□□ -0.511e-11■■■□□ 15.3
TRAPPC12-205ENST00000416918 EFTUD2Q15029 972 aaKnown RBP eCLIP11.24□□□□□ -0.613e-7■■■□□ 15.2
TRAPPC12-205ENST00000416918 SAFB2Q14151 953 aaKnown RBP eCLIP14.57□□□□□ -0.089e-7■■■□□ 15.2
TRAPPC12-205ENST00000416918 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.49□□□□□ -0.578e-6■■□□□ 13.2
TRAPPC12-205ENST00000416918 NIPBLQ6KC79 2804 aaeCLIP7.69□□□□□ -1.182e-7■■□□□ 12.9
TRAPPC12-205ENST00000416918 SF3A3Q12874 501 aaKnown RBP eCLIP11.03□□□□□ -0.643e-9■□□□□ 10.4
TRAPPC12-205ENST00000416918 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.39□□□□□ -0.433e-6■□□□□ 10.3
TRAPPC12-205ENST00000416918 XRCC6P12956 609 aaKnown RBP eCLIP12.91□□□□□ -0.343e-7■□□□□ 10.3
TRAPPC12-205ENST00000416918 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.43■□□□□ 0.061e-7■□□□□ 8.7
Retrieved 29 of 29 RNA–protein pairs in 7.1 ms