RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 A0A1B0GW54 56 aa5.19□□□□□ -1.58
RFFL-203ENST00000413582 A0A1B0GV72 72 aa5.18□□□□□ -1.58
RFFL-203ENST00000413582 A0A0A0MQY5 61 aa5.17□□□□□ -1.58
RFFL-203ENST00000413582 M0R2T5 61 aa5.17□□□□□ -1.58
RFFL-203ENST00000413582 CCKP06307 115 aa5.17□□□□□ -1.58
RFFL-203ENST00000413582 Q6Q795 121 aa5.17□□□□□ -1.58
RFFL-203ENST00000413582 Q6ZQT0 140 aa5.16□□□□□ -1.58
RFFL-203ENST00000413582 C14orf132Q9NPU4 83 aa5.16□□□□□ -1.58
RFFL-203ENST00000413582 ACYP1P07311 99 aa5.15□□□□□ -1.59
RFFL-203ENST00000413582 CD164Q04900 197 aa5.15□□□□□ -1.59
RFFL-203ENST00000413582 C9orf153Q5TBE3 101 aa5.15□□□□□ -1.59
RFFL-203ENST00000413582 IGFL1Q6UW32 110 aa5.15□□□□□ -1.59
RFFL-203ENST00000413582 FAM240AA0A1B0GVK7 77 aa5.14□□□□□ -1.59
RFFL-203ENST00000413582 C9orf92A6NGG3 77 aa5.13□□□□□ -1.59
RFFL-203ENST00000413582 SSPOA2VEC9 5147 aa5.13□□□□□ -1.59
RFFL-203ENST00000413582 A0A1W2PNM2 257 aa5.12□□□□□ -1.59
RFFL-203ENST00000413582 USH2AO75445 5202 aa5.11□□□□□ -1.59
RFFL-203ENST00000413582 COX6B2Q6YFQ2 88 aa5.11□□□□□ -1.59
RFFL-203ENST00000413582 TRBV7-7A0A0K0K1E9 115 aa5.09□□□□□ -1.59
RFFL-203ENST00000413582 SCGB1A1P11684 91 aa5.09□□□□□ -1.59
RFFL-203ENST00000413582 LIMD2Q9BT23 127 aa5.09□□□□□ -1.59
RFFL-203ENST00000413582 A0A0G2JQZ4 141 aa5.08□□□□□ -1.6
RFFL-203ENST00000413582 Q5XG85 94 aa5.08□□□□□ -1.6
RFFL-203ENST00000413582 VPS25Q9BRG1 176 aa5.08□□□□□ -1.6
RFFL-203ENST00000413582 SS18L2Q9UHA2 77 aa5.08□□□□□ -1.6
RFFL-203ENST00000413582 FCGBPQ9Y6R7 5405 aaPredicted RBP5.07□□□□□ -1.6
RFFL-203ENST00000413582 UBL5Q9BZL1 73 aa5.07□□□□□ -1.6
RFFL-203ENST00000413582 RPL37P61927 97 aaKnown RBP5.06□□□□□ -1.6
RFFL-203ENST00000413582 HRCT1Q6UXD1 115 aa5.06□□□□□ -1.6
RFFL-203ENST00000413582 A0A087WSZ3 146 aa5.05□□□□□ -1.6
RFFL-203ENST00000413582 NREPQ16612 68 aa5.05□□□□□ -1.6
RFFL-203ENST00000413582 LINC00846Q9NV44 126 aa5.05□□□□□ -1.6
RFFL-203ENST00000413582 V9GYY9 64 aa5.05□□□□□ -1.6
RFFL-203ENST00000413582 Q6ZVQ6 151 aa5.03□□□□□ -1.6
RFFL-203ENST00000413582 LINC00643Q86TS7 51 aa5.02□□□□□ -1.61
RFFL-203ENST00000413582 J3KT08 172 aa5.01□□□□□ -1.61
RFFL-203ENST00000413582 SIGMAR1Q99720 223 aa5.01□□□□□ -1.61
RFFL-203ENST00000413582 ATP5EP2Q5VTU8 51 aa5□□□□□ -1.61
RFFL-203ENST00000413582 KRTAP9-8Q9BYQ0 159 aa5□□□□□ -1.61
RFFL-203ENST00000413582 LINC00472Q9H8W2 130 aa5□□□□□ -1.61
RFFL-203ENST00000413582 CXCL6P80162 114 aa4.99□□□□□ -1.61
RFFL-203ENST00000413582 IMUPQ9GZP8 106 aa4.99□□□□□ -1.61
RFFL-203ENST00000413582 BPY2O14599 106 aa4.98□□□□□ -1.61
RFFL-203ENST00000413582 C1orf195Q5TG92 126 aa4.98□□□□□ -1.61
RFFL-203ENST00000413582 Q96NJ1 140 aa4.97□□□□□ -1.61
RFFL-203ENST00000413582 KRTAP19-1Q8IUB9 90 aa4.96□□□□□ -1.62
RFFL-203ENST00000413582 KRTAP3-1Q9BYR8 98 aa4.96□□□□□ -1.62
RFFL-203ENST00000413582 MACF1Q9UPN3 7388 aaKnown RBP4.94□□□□□ -1.62
RFFL-203ENST00000413582 A8MWP4 228 aa4.94□□□□□ -1.62
RFFL-203ENST00000413582 NDUFB1O75438 58 aa4.94□□□□□ -1.62
RFFL-203ENST00000413582 IGKV4-1P06312 121 aa4.94□□□□□ -1.62
RFFL-203ENST00000413582 SYNE2Q8WXH0 6885 aaKnown RBP4.94□□□□□ -1.62
RFFL-203ENST00000413582 DSCR10P59022 87 aa4.93□□□□□ -1.62
RFFL-203ENST00000413582 PRR15Q8IV56 129 aa4.92□□□□□ -1.62
RFFL-203ENST00000413582 IGKV3D-7A0A0C4DH55 119 aa4.91□□□□□ -1.62
RFFL-203ENST00000413582 MT-ATP8P03928 68 aa4.91□□□□□ -1.62
RFFL-203ENST00000413582 DEFB116Q30KQ4 102 aa4.91□□□□□ -1.62
RFFL-203ENST00000413582 A0A1B0GVX0 72 aa4.9□□□□□ -1.63
RFFL-203ENST00000413582 C8orf87E5RJ46 101 aa4.9□□□□□ -1.63
RFFL-203ENST00000413582 MT2AP02795 61 aa4.9□□□□□ -1.63
RFFL-203ENST00000413582 SMIM20Q8N5G0 67 aa4.9□□□□□ -1.63
RFFL-203ENST00000413582 K7EQZ3 153 aa4.88□□□□□ -1.63
RFFL-203ENST00000413582 Q75L30 129 aa4.88□□□□□ -1.63
RFFL-203ENST00000413582 MT1FP04733 61 aa4.87□□□□□ -1.63
RFFL-203ENST00000413582 HIST1H4AP62805 103 aaKnown RBP4.87□□□□□ -1.63
RFFL-203ENST00000413582 ATP11AUNQ6ZP68 121 aa4.87□□□□□ -1.63
RFFL-203ENST00000413582 KRTAP9-3Q9BYQ3 159 aa4.86□□□□□ -1.63
RFFL-203ENST00000413582 IGHV6-1A0A0B4J1U7 121 aa4.85□□□□□ -1.63
RFFL-203ENST00000413582 LINC00313P59037 77 aa4.85□□□□□ -1.63
RFFL-203ENST00000413582 C8orf17Q9NRJ1 99 aa4.85□□□□□ -1.63
RFFL-203ENST00000413582 MMP24-AS1A0A0U1RRL7 71 aa4.84□□□□□ -1.63
RFFL-203ENST00000413582 HCG22E2RYF7 251 aa4.84□□□□□ -1.63
RFFL-203ENST00000413582 Q8N9L7 120 aa4.84□□□□□ -1.63
RFFL-203ENST00000413582 hDV103S1A0JD37 113 aa4.82□□□□□ -1.64
RFFL-203ENST00000413582 CASC2Q6XLA1 102 aa4.82□□□□□ -1.64
RFFL-203ENST00000413582 TMEM254Q8TBM7 123 aa4.82□□□□□ -1.64
RFFL-203ENST00000413582 A0A087WVE0 104 aa4.81□□□□□ -1.64
RFFL-203ENST00000413582 NOTCH2NLQ7Z3S9 236 aa4.8□□□□□ -1.64
RFFL-203ENST00000413582 MRPL34Q9BQ48 92 aaKnown RBP4.8□□□□□ -1.64
RFFL-203ENST00000413582 PRO0628Q9UI54 55 aa4.8□□□□□ -1.64
RFFL-203ENST00000413582 KRTAP16-1A8MUX0 517 aa4.79□□□□□ -1.64
RFFL-203ENST00000413582 KRTAP10-10P60014 251 aa4.79□□□□□ -1.64
RFFL-203ENST00000413582 KRTAP19-6Q3LI70 58 aa4.79□□□□□ -1.64
RFFL-203ENST00000413582 Q8N9P0 234 aaPredicted RBP4.79□□□□□ -1.64
RFFL-203ENST00000413582 ATOX1O00244 68 aa4.78□□□□□ -1.64
RFFL-203ENST00000413582 KRTAP19-4Q3LI73 84 aa4.78□□□□□ -1.64
RFFL-203ENST00000413582 WFDC13Q8IUB5 93 aa4.78□□□□□ -1.64
RFFL-203ENST00000413582 C20orf166-AS1Q96NR2 134 aa4.78□□□□□ -1.64
RFFL-203ENST00000413582 TP53AIP1Q9HCN2 124 aa4.78□□□□□ -1.64
RFFL-203ENST00000413582 FAM236AA0A1B0GUQ0 79 aa4.77□□□□□ -1.65
RFFL-203ENST00000413582 FAM236BA0A1B0GV22 79 aa4.77□□□□□ -1.65
RFFL-203ENST00000413582 A8MUU9 505 aa4.76□□□□□ -1.65
RFFL-203ENST00000413582 KRTAP6-3Q3LI67 103 aa4.76□□□□□ -1.65
RFFL-203ENST00000413582 C4orf26Q17RF5 130 aa4.75□□□□□ -1.65
RFFL-203ENST00000413582 FAM236DA0A1B0GTK5 79 aa4.73□□□□□ -1.65
RFFL-203ENST00000413582 UQCRQO14949 82 aa4.73□□□□□ -1.65
RFFL-203ENST00000413582 FAM236CP0DP71 79 aa4.73□□□□□ -1.65
RFFL-203ENST00000413582 ANAPC13Q9BS18 74 aa4.73□□□□□ -1.65
RFFL-203ENST00000413582 OCR1Q9BZK8 76 aa4.73□□□□□ -1.65
RFFL-203ENST00000413582 TRAV7A0A075B6U4 112 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms