RNA–Protein interactions for RNA: ENST00000413164.6

SLC13A3-204, Transcript of solute carrier family 13 member 3, humanhuman

TSL 2 BASIC

Gene SLC13A3, Length 2,008 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-204ENST00000413164 CDK2AP2O75956 126 aa12.19□□□□□ -0.46
SLC13A3-204ENST00000413164 LINC00208Q96KT6 92 aa12.19□□□□□ -0.46
SLC13A3-204ENST00000413164 TRAV22A0A0B4J277 110 aa12.18□□□□□ -0.46
SLC13A3-204ENST00000413164 KRTAP1-4P0C5Y4 121 aa12.17□□□□□ -0.46
SLC13A3-204ENST00000413164 Q5XG85 94 aa12.15□□□□□ -0.46
SLC13A3-204ENST00000413164 NOTCH2NLQ7Z3S9 236 aa12.15□□□□□ -0.47
SLC13A3-204ENST00000413164 TP53AIP1Q9HCN2 124 aa12.15□□□□□ -0.47
SLC13A3-204ENST00000413164 VPS13BQ7Z7G8 4022 aa12.14□□□□□ -0.47
SLC13A3-204ENST00000413164 SPINK6Q6UWN8 80 aa12.12□□□□□ -0.47
SLC13A3-204ENST00000413164 MRPL34Q9BQ48 92 aaKnown RBP12.11□□□□□ -0.47
SLC13A3-204ENST00000413164 C1orf64Q8NEQ6 169 aa12.1□□□□□ -0.47
SLC13A3-204ENST00000413164 SMIM26A0A096LP01 95 aa12.08□□□□□ -0.48
SLC13A3-204ENST00000413164 CYP4F30PQ9H0H9 118 aa12.08□□□□□ -0.48
SLC13A3-204ENST00000413164 FP248Q71RG6 208 aaPredicted RBP12.06□□□□□ -0.48
SLC13A3-204ENST00000413164 DYNC1H1Q14204 4646 aaKnown RBP12.04□□□□□ -0.48
SLC13A3-204ENST00000413164 SPANXA2-OT1Q8N9U9 137 aa12.03□□□□□ -0.48
SLC13A3-204ENST00000413164 NDUFS5O43920 106 aa12.02□□□□□ -0.49
SLC13A3-204ENST00000413164 C4orf26Q17RF5 130 aa12.02□□□□□ -0.49
SLC13A3-204ENST00000413164 C1orf195Q5TG92 126 aa12.01□□□□□ -0.49
SLC13A3-204ENST00000413164 SMR3BP02814 79 aaPredicted RBP12.01□□□□□ -0.49
SLC13A3-204ENST00000413164 PLA2G1BP04054 148 aaKnown RBP12□□□□□ -0.49
SLC13A3-204ENST00000413164 C8orf87E5RJ46 101 aa11.99□□□□□ -0.49
SLC13A3-204ENST00000413164 PRR4Q16378 134 aa11.99□□□□□ -0.49
SLC13A3-204ENST00000413164 LIMD2Q9BT23 127 aa11.94□□□□□ -0.5
SLC13A3-204ENST00000413164 TYMSOSQ8TAI1 123 aa11.93□□□□□ -0.5
SLC13A3-204ENST00000413164 KRTAP13-3Q3SY46 172 aa11.93□□□□□ -0.5
SLC13A3-204ENST00000413164 LINC00313P59037 77 aa11.91□□□□□ -0.5
SLC13A3-204ENST00000413164 Q5W150 140 aa11.89□□□□□ -0.51
SLC13A3-204ENST00000413164 APOBP04114 4563 aaKnown RBP11.89□□□□□ -0.51
SLC13A3-204ENST00000413164 IGLV7-46A0A075B6I9 117 aa11.89□□□□□ -0.51
SLC13A3-204ENST00000413164 SPINK1P00995 79 aa11.89□□□□□ -0.51
SLC13A3-204ENST00000413164 EPPK1P58107 5090 aaKnown RBP11.88□□□□□ -0.51
SLC13A3-204ENST00000413164 C4orf48Q5BLP8 95 aa11.87□□□□□ -0.51
SLC13A3-204ENST00000413164 Q8N9P0 234 aaPredicted RBP11.86□□□□□ -0.51
SLC13A3-204ENST00000413164 KRTAP10-4P60372 401 aaPredicted RBP11.86□□□□□ -0.51
SLC13A3-204ENST00000413164 PCOTHQ58A44 107 aa11.86□□□□□ -0.51
SLC13A3-204ENST00000413164 PRR26Q8N8Z3 221 aa11.84□□□□□ -0.51
SLC13A3-204ENST00000413164 KRTAP16-1A8MUX0 517 aa11.83□□□□□ -0.52
SLC13A3-204ENST00000413164 LOC101927531A0A1B0GV80 90 aa11.82□□□□□ -0.52
SLC13A3-204ENST00000413164 FAM229AH3BQW9 127 aa11.82□□□□□ -0.52
SLC13A3-204ENST00000413164 MPLKIPQ8TAP9 179 aa11.81□□□□□ -0.52
SLC13A3-204ENST00000413164 RPS29P62273 56 aaKnown RBP11.81□□□□□ -0.52
SLC13A3-204ENST00000413164 SVIPQ8NHG7 77 aa11.8□□□□□ -0.52
SLC13A3-204ENST00000413164 LINC00304Q8N9R0 145 aa11.79□□□□□ -0.52
SLC13A3-204ENST00000413164 Q5VSD8 79 aa11.76□□□□□ -0.53
SLC13A3-204ENST00000413164 Q1T7F1 81 aa11.76□□□□□ -0.53
SLC13A3-204ENST00000413164 SPAG11AQ6PDA7 123 aa11.76□□□□□ -0.53
SLC13A3-204ENST00000413164 FAT1Q14517 4588 aa11.73□□□□□ -0.53
SLC13A3-204ENST00000413164 HSPG2P98160 4391 aa11.72□□□□□ -0.53
SLC13A3-204ENST00000413164 COA5Q86WW8 74 aa11.7□□□□□ -0.54
SLC13A3-204ENST00000413164 KIAA1109Q2LD37 5005 aa11.7□□□□□ -0.54
SLC13A3-204ENST00000413164 RYR1P21817 5038 aa11.69□□□□□ -0.54
SLC13A3-204ENST00000413164 Q8N1X5 172 aa11.69□□□□□ -0.54
SLC13A3-204ENST00000413164 KRTAP17-1Q9BYP8 105 aa11.67□□□□□ -0.54
SLC13A3-204ENST00000413164 PKHD1L1Q86WI1 4243 aa11.65□□□□□ -0.54
SLC13A3-204ENST00000413164 IGKV2-30P06310 120 aa11.63□□□□□ -0.55
SLC13A3-204ENST00000413164 RETNLBQ9BQ08 111 aa11.63□□□□□ -0.55
SLC13A3-204ENST00000413164 HRES1P13985 223 aa11.6□□□□□ -0.55
SLC13A3-204ENST00000413164 V9GYY9 64 aa11.59□□□□□ -0.55
SLC13A3-204ENST00000413164 PSPHP1O15172 72 aa11.52□□□□□ -0.56
SLC13A3-204ENST00000413164 DMAC1Q96GE9 116 aa11.51□□□□□ -0.57
SLC13A3-204ENST00000413164 BIRC6Q9NR09 4857 aa11.51□□□□□ -0.57
SLC13A3-204ENST00000413164 A8MUN3 132 aa11.48□□□□□ -0.57
SLC13A3-204ENST00000413164 KRTAP4-5Q9BYR2 181 aa11.47□□□□□ -0.57
SLC13A3-204ENST00000413164 ACYP2P14621 99 aa11.47□□□□□ -0.57
SLC13A3-204ENST00000413164 PRO0628Q9UI54 55 aa11.46□□□□□ -0.57
SLC13A3-204ENST00000413164 IGKV2D-30A0A075B6S6 120 aa11.45□□□□□ -0.58
SLC13A3-204ENST00000413164 Q5VV11 94 aa11.44□□□□□ -0.58
SLC13A3-204ENST00000413164 BRK1Q8WUW1 75 aa11.43□□□□□ -0.58
SLC13A3-204ENST00000413164 FLG2Q5D862 2391 aaPredicted RBP11.42□□□□□ -0.58
SLC13A3-204ENST00000413164 C20orf166-AS1Q96NR2 134 aa11.42□□□□□ -0.58
SLC13A3-204ENST00000413164 A8MUU9 505 aa11.4□□□□□ -0.58
SLC13A3-204ENST00000413164 C9orf92A6NGG3 77 aa11.4□□□□□ -0.59
SLC13A3-204ENST00000413164 LINC01558Q9Y6Z2 57 aa11.39□□□□□ -0.59
SLC13A3-204ENST00000413164 PRR15LQ9BU68 103 aa11.38□□□□□ -0.59
SLC13A3-204ENST00000413164 KRTAP10-8P60410 259 aa11.37□□□□□ -0.59
SLC13A3-204ENST00000413164 C7orf65Q6ZTY9 151 aa11.35□□□□□ -0.59
SLC13A3-204ENST00000413164 TNXBP22105 4242 aa11.32□□□□□ -0.6
SLC13A3-204ENST00000413164 Q75L30 129 aa11.31□□□□□ -0.6
SLC13A3-204ENST00000413164 LRP1Q07954 4544 aaKnown RBP11.3□□□□□ -0.6
SLC13A3-204ENST00000413164 HERC2O95714 4834 aa11.29□□□□□ -0.6
SLC13A3-204ENST00000413164 CHKB-CPT1BH3BT56 60 aa11.28□□□□□ -0.6
SLC13A3-204ENST00000413164 MYCBP2O75592 4640 aa11.24□□□□□ -0.61
SLC13A3-204ENST00000413164 FAT3Q8TDW7 4589 aa11.21□□□□□ -0.61
SLC13A3-204ENST00000413164 MT1HL1P0DM35 61 aa11.21□□□□□ -0.62
SLC13A3-204ENST00000413164 ABCA13Q86UQ4 5058 aa11.17□□□□□ -0.62
SLC13A3-204ENST00000413164 A8MU10 97 aa11.14□□□□□ -0.63
SLC13A3-204ENST00000413164 DMBT1Q9UGM3 2413 aaPredicted RBP11.14□□□□□ -0.63
SLC13A3-204ENST00000413164 A6NED7 52 aa11.13□□□□□ -0.63
SLC13A3-204ENST00000413164 J3QL48 77 aa11.13□□□□□ -0.63
SLC13A3-204ENST00000413164 SPINK7P58062 85 aa11.12□□□□□ -0.63
SLC13A3-204ENST00000413164 LCA10Q71F78 164 aa11.09□□□□□ -0.63
SLC13A3-204ENST00000413164 KRTAP3-1Q9BYR8 98 aa11.06□□□□□ -0.64
SLC13A3-204ENST00000413164 CDC42SE1Q9NRR8 79 aa11.03□□□□□ -0.64
SLC13A3-204ENST00000413164 A0A1B0GU69 56 aa11.01□□□□□ -0.65
SLC13A3-204ENST00000413164 RPL37P61927 97 aaKnown RBP10.99□□□□□ -0.65
SLC13A3-204ENST00000413164 XP32Q5T750 250 aa10.98□□□□□ -0.65
SLC13A3-204ENST00000413164 ATP11AUNQ6ZP68 121 aa10.98□□□□□ -0.65
SLC13A3-204ENST00000413164 PCLOQ9Y6V0 5065 aa10.95□□□□□ -0.66
SLC13A3-204ENST00000413164 COX6B2Q6YFQ2 88 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms