RNA–Protein interactions for RNA: ENST00000409892.5

RAB1A-204, Transcript of RAB1A, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB1A, Length 2,254 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1A-204ENST00000409892 FAM229AH3BQW9 127 aa10.4□□□□□ -0.75
RAB1A-204ENST00000409892 CRIPTQ9P021 101 aa10.36□□□□□ -0.75
RAB1A-204ENST00000409892 PSORS1C2Q9UIG4 136 aa10.36□□□□□ -0.75
RAB1A-204ENST00000409892 MXRA5Q9NR99 2828 aa10.36□□□□□ -0.75
RAB1A-204ENST00000409892 FLNAP21333 2647 aaKnown RBP10.34□□□□□ -0.75
RAB1A-204ENST00000409892 ACANP16112 2415 aa10.33□□□□□ -0.76
RAB1A-204ENST00000409892 CUBNO60494 3623 aa10.33□□□□□ -0.76
RAB1A-204ENST00000409892 CHTF8P0CG12 524 aa10.32□□□□□ -0.76
RAB1A-204ENST00000409892 K7ERS5 55 aa10.31□□□□□ -0.76
RAB1A-204ENST00000409892 IGKV2D-30A0A075B6S6 120 aa10.3□□□□□ -0.76
RAB1A-204ENST00000409892 IGLV9-49A0A0B4J1Y8 123 aa10.3□□□□□ -0.76
RAB1A-204ENST00000409892 LUZP6Q538Z0 58 aa10.29□□□□□ -0.76
RAB1A-204ENST00000409892 ANK3Q12955 4377 aaKnown RBP10.28□□□□□ -0.76
RAB1A-204ENST00000409892 ANAPC11Q9NYG5 84 aa10.28□□□□□ -0.76
RAB1A-204ENST00000409892 NBEAL1Q6ZS30 2694 aa10.27□□□□□ -0.76
RAB1A-204ENST00000409892 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.27□□□□□ -0.76
RAB1A-204ENST00000409892 KRTAP1-1Q07627 177 aa10.26□□□□□ -0.77
RAB1A-204ENST00000409892 FBN1P35555 2871 aaKnown RBP10.26□□□□□ -0.77
RAB1A-204ENST00000409892 KRTAP13-1Q8IUC0 172 aa10.25□□□□□ -0.77
RAB1A-204ENST00000409892 SONP18583 2426 aaKnown RBP10.25□□□□□ -0.77
RAB1A-204ENST00000409892 SMR3AQ99954 134 aa10.24□□□□□ -0.77
RAB1A-204ENST00000409892 STAB1Q9NY15 2570 aa10.23□□□□□ -0.77
RAB1A-204ENST00000409892 A0A1B0GU33 70 aa10.23□□□□□ -0.77
RAB1A-204ENST00000409892 ATRQ13535 2644 aa10.23□□□□□ -0.77
RAB1A-204ENST00000409892 COL6A5A8TX70 2615 aa10.21□□□□□ -0.77
RAB1A-204ENST00000409892 NSD1Q96L73 2696 aaPredicted RBP10.2□□□□□ -0.78
RAB1A-204ENST00000409892 H1FX-AS1Q4G0G2 97 aa10.18□□□□□ -0.78
RAB1A-204ENST00000409892 HIVEP2P31629 2446 aa10.17□□□□□ -0.78
RAB1A-204ENST00000409892 TPRXLQ17RH7 258 aa10.14□□□□□ -0.79
RAB1A-204ENST00000409892 SPINK1P00995 79 aa10.13□□□□□ -0.79
RAB1A-204ENST00000409892 FLG2Q5D862 2391 aaPredicted RBP10.13□□□□□ -0.79
RAB1A-204ENST00000409892 SPINK6Q6UWN8 80 aa10.12□□□□□ -0.79
RAB1A-204ENST00000409892 WWC2-AS2Q96NR7 200 aa10.12□□□□□ -0.79
RAB1A-204ENST00000409892 SEC61BP60468 96 aaKnown RBP10.09□□□□□ -0.79
RAB1A-204ENST00000409892 SRRM2Q9UQ35 2752 aaKnown RBP10.07□□□□□ -0.8
RAB1A-204ENST00000409892 NBDYA0A0U1RRE5 68 aa10.07□□□□□ -0.8
RAB1A-204ENST00000409892 C14orf177Q52M58 125 aa10.07□□□□□ -0.8
RAB1A-204ENST00000409892 TYMSOSQ8TAI1 123 aa10.06□□□□□ -0.8
RAB1A-204ENST00000409892 DNAH1Q9P2D7 4330 aa10.02□□□□□ -0.81
RAB1A-204ENST00000409892 CSMD3Q7Z407 3707 aa9.97□□□□□ -0.81
RAB1A-204ENST00000409892 KRTAP10-3P60369 221 aa9.96□□□□□ -0.82
RAB1A-204ENST00000409892 ANK2Q01484 3957 aa9.96□□□□□ -0.82
RAB1A-204ENST00000409892 Q8N1X5 172 aa9.89□□□□□ -0.83
RAB1A-204ENST00000409892 RPL37P61927 97 aaKnown RBP9.86□□□□□ -0.83
RAB1A-204ENST00000409892 C10orf95Q9H7T3 257 aa9.85□□□□□ -0.83
RAB1A-204ENST00000409892 COX6B2Q6YFQ2 88 aa9.84□□□□□ -0.83
RAB1A-204ENST00000409892 TENM1Q9UKZ4 2725 aa9.82□□□□□ -0.84
RAB1A-204ENST00000409892 KRTAP24-1Q3LI83 254 aa9.78□□□□□ -0.84
RAB1A-204ENST00000409892 CIRBP-AS1Q8TBR5 109 aa9.77□□□□□ -0.85
RAB1A-204ENST00000409892 MEGF8Q7Z7M0 2845 aa9.76□□□□□ -0.85
RAB1A-204ENST00000409892 TRRAPQ9Y4A5 3859 aa9.76□□□□□ -0.85
RAB1A-204ENST00000409892 PKD1L1Q8TDX9 2849 aa9.72□□□□□ -0.85
RAB1A-204ENST00000409892 VWFP04275 2813 aa9.7□□□□□ -0.86
RAB1A-204ENST00000409892 NOTCH1P46531 2555 aa9.7□□□□□ -0.86
RAB1A-204ENST00000409892 TGP01266 2768 aa9.69□□□□□ -0.86
RAB1A-204ENST00000409892 SPACA4Q8TDM5 124 aa9.66□□□□□ -0.86
RAB1A-204ENST00000409892 KRTAP1-5Q9BYS1 174 aa9.65□□□□□ -0.86
RAB1A-204ENST00000409892 MGAM2Q2M2H8 2515 aa9.6□□□□□ -0.87
RAB1A-204ENST00000409892 FRAS1Q86XX4 4008 aa9.56□□□□□ -0.88
RAB1A-204ENST00000409892 CMYA5Q8N3K9 4069 aa9.56□□□□□ -0.88
RAB1A-204ENST00000409892 KRTAP17-1Q9BYP8 105 aa9.54□□□□□ -0.88
RAB1A-204ENST00000409892 KRTAP3-1Q9BYR8 98 aa9.54□□□□□ -0.88
RAB1A-204ENST00000409892 DNAH10Q8IVF4 4471 aa9.52□□□□□ -0.89
RAB1A-204ENST00000409892 DNAH8Q96JB1 4490 aa9.48□□□□□ -0.89
RAB1A-204ENST00000409892 XP32Q5T750 250 aa9.47□□□□□ -0.89
RAB1A-204ENST00000409892 A0A0D9SG42 100 aa9.46□□□□□ -0.9
RAB1A-204ENST00000409892 KRTAP13-4Q3LI77 160 aa9.46□□□□□ -0.9
RAB1A-204ENST00000409892 COL7A1Q02388 2944 aa9.46□□□□□ -0.9
RAB1A-204ENST00000409892 LYSTQ99698 3801 aa9.46□□□□□ -0.9
RAB1A-204ENST00000409892 S4R3F8 94 aa9.44□□□□□ -0.9
RAB1A-204ENST00000409892 BIRC6Q9NR09 4857 aa9.44□□□□□ -0.9
RAB1A-204ENST00000409892 RYR3Q15413 4870 aa9.44□□□□□ -0.9
RAB1A-204ENST00000409892 PRKDCP78527 4128 aaKnown RBP9.43□□□□□ -0.9
RAB1A-204ENST00000409892 TENM3Q9P273 2699 aa9.42□□□□□ -0.9
RAB1A-204ENST00000409892 KRTAP10-6P60371 365 aaPredicted RBP9.42□□□□□ -0.9
RAB1A-204ENST00000409892 KRTAP10-11P60412 298 aa9.42□□□□□ -0.9
RAB1A-204ENST00000409892 KRTAP3-2Q9BYR7 98 aa9.42□□□□□ -0.9
RAB1A-204ENST00000409892 APLNQ9ULZ1 77 aa9.41□□□□□ -0.9
RAB1A-204ENST00000409892 KMT2CQ8NEZ4 4911 aaKnown RBP9.41□□□□□ -0.9
RAB1A-204ENST00000409892 CAMK2N1Q7Z7J9 78 aa9.38□□□□□ -0.91
RAB1A-204ENST00000409892 DNAH3Q8TD57 4116 aa9.37□□□□□ -0.91
RAB1A-204ENST00000409892 PLAC4Q8WY50 150 aa9.34□□□□□ -0.91
RAB1A-204ENST00000409892 UBE2DNLQ8IWF7 75 aa9.3□□□□□ -0.92
RAB1A-204ENST00000409892 DNAH9Q9NYC9 4486 aa9.3□□□□□ -0.92
RAB1A-204ENST00000409892 KRTAP13-2Q52LG2 175 aa9.29□□□□□ -0.92
RAB1A-204ENST00000409892 KRTAP12-2P59991 146 aa9.28□□□□□ -0.92
RAB1A-204ENST00000409892 DNAH17Q9UFH2 4485 aa9.26□□□□□ -0.93
RAB1A-204ENST00000409892 Q6ZRN7 208 aaPredicted RBP9.26□□□□□ -0.93
RAB1A-204ENST00000409892 HUWE1Q7Z6Z7 4374 aaKnown RBP9.17□□□□□ -0.94
RAB1A-204ENST00000409892 KRTAP12-1P59990 96 aa9.17□□□□□ -0.94
RAB1A-204ENST00000409892 VPS13DQ5THJ4 4388 aa9.17□□□□□ -0.94
RAB1A-204ENST00000409892 EPPK1P58107 5090 aaKnown RBP9.14□□□□□ -0.95
RAB1A-204ENST00000409892 DYNC2H1Q8NCM8 4307 aaKnown RBP9.1□□□□□ -0.95
RAB1A-204ENST00000409892 STAB2Q8WWQ8 2551 aa9.08□□□□□ -0.96
RAB1A-204ENST00000409892 J3QL48 77 aa9.07□□□□□ -0.96
RAB1A-204ENST00000409892 KRTAP3-3Q9BYR6 98 aa9.07□□□□□ -0.96
RAB1A-204ENST00000409892 DMBT1Q9UGM3 2413 aaPredicted RBP9.07□□□□□ -0.96
RAB1A-204ENST00000409892 RYR2Q92736 4967 aa9.02□□□□□ -0.97
RAB1A-204ENST00000409892 PRO2289Q9P1D8 64 aa9.01□□□□□ -0.97
RAB1A-204ENST00000409892 KRTAP1-4P0C5Y4 121 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms