RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 APLNQ9ULZ1 77 aa6.63□□□□□ -1.35
NIF3L1-204ENST00000409357 BIRC6Q9NR09 4857 aa6.63□□□□□ -1.35
NIF3L1-204ENST00000409357 SPINK7P58062 85 aa6.62□□□□□ -1.35
NIF3L1-204ENST00000409357 PKHD1P08F94 4074 aa6.61□□□□□ -1.35
NIF3L1-204ENST00000409357 A0A087WSZ3 146 aa6.61□□□□□ -1.35
NIF3L1-204ENST00000409357 SPRR1BP22528 89 aa6.6□□□□□ -1.35
NIF3L1-204ENST00000409357 DEFB116Q30KQ4 102 aa6.6□□□□□ -1.35
NIF3L1-204ENST00000409357 SPAG11AQ6PDA7 123 aa6.6□□□□□ -1.35
NIF3L1-204ENST00000409357 MMP24-AS1A0A0U1RRL7 71 aa6.59□□□□□ -1.35
NIF3L1-204ENST00000409357 HRES1P13985 223 aa6.58□□□□□ -1.36
NIF3L1-204ENST00000409357 HTN3P15516 51 aa6.58□□□□□ -1.36
NIF3L1-204ENST00000409357 LINC01556Q5JQF7 62 aa6.58□□□□□ -1.36
NIF3L1-204ENST00000409357 REG3GQ6UW15 175 aa6.58□□□□□ -1.36
NIF3L1-204ENST00000409357 PKD1P98161 4303 aa6.57□□□□□ -1.36
NIF3L1-204ENST00000409357 DNAH17Q9UFH2 4485 aa6.57□□□□□ -1.36
NIF3L1-204ENST00000409357 RTL8CO15255 209 aa6.56□□□□□ -1.36
NIF3L1-204ENST00000409357 RPL37AP61513 92 aaKnown RBP6.55□□□□□ -1.36
NIF3L1-204ENST00000409357 KRTAP7-1Q8IUC3 87 aa6.55□□□□□ -1.36
NIF3L1-204ENST00000409357 IGKV2-24A0A0C4DH68 120 aa6.54□□□□□ -1.36
NIF3L1-204ENST00000409357 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.54□□□□□ -1.36
NIF3L1-204ENST00000409357 H0Y9J4 135 aa6.53□□□□□ -1.36
NIF3L1-204ENST00000409357 SPATA8Q6RVD6 105 aa6.53□□□□□ -1.36
NIF3L1-204ENST00000409357 PCOTHQ58A44 107 aa6.49□□□□□ -1.37
NIF3L1-204ENST00000409357 DNAH11Q96DT5 4516 aa6.49□□□□□ -1.37
NIF3L1-204ENST00000409357 KIAA1109Q2LD37 5005 aa6.49□□□□□ -1.37
NIF3L1-204ENST00000409357 FAM168BA1KXE4 195 aa6.49□□□□□ -1.37
NIF3L1-204ENST00000409357 DNAH10OSP0CZ25 163 aa6.49□□□□□ -1.37
NIF3L1-204ENST00000409357 PRR26Q8N8Z3 221 aa6.49□□□□□ -1.37
NIF3L1-204ENST00000409357 UBE2DNLQ8IWF7 75 aa6.48□□□□□ -1.37
NIF3L1-204ENST00000409357 PRAC1Q96KF2 57 aa6.48□□□□□ -1.37
NIF3L1-204ENST00000409357 RETNLBQ9BQ08 111 aa6.47□□□□□ -1.37
NIF3L1-204ENST00000409357 ACYP2P14621 99 aa6.46□□□□□ -1.37
NIF3L1-204ENST00000409357 C8orf17Q9NRJ1 99 aa6.45□□□□□ -1.38
NIF3L1-204ENST00000409357 DYNC1H1Q14204 4646 aaKnown RBP6.45□□□□□ -1.38
NIF3L1-204ENST00000409357 A0A0G2JQZ4 141 aa6.45□□□□□ -1.38
NIF3L1-204ENST00000409357 A0A1W2PNN7 141 aa6.45□□□□□ -1.38
NIF3L1-204ENST00000409357 HERC2O95714 4834 aa6.44□□□□□ -1.38
NIF3L1-204ENST00000409357 A0A1B0GVY2 172 aa6.44□□□□□ -1.38
NIF3L1-204ENST00000409357 KRTAP1-5Q9BYS1 174 aa6.43□□□□□ -1.38
NIF3L1-204ENST00000409357 Q96NJ1 140 aa6.42□□□□□ -1.38
NIF3L1-204ENST00000409357 MRPL34Q9BQ48 92 aaKnown RBP6.42□□□□□ -1.38
NIF3L1-204ENST00000409357 LRP1BQ9NZR2 4599 aa6.4□□□□□ -1.38
NIF3L1-204ENST00000409357 NBDYA0A0U1RRE5 68 aa6.4□□□□□ -1.38
NIF3L1-204ENST00000409357 A0A1B0GVX0 72 aa6.4□□□□□ -1.38
NIF3L1-204ENST00000409357 ADM2Q7Z4H4 148 aa6.4□□□□□ -1.38
NIF3L1-204ENST00000409357 DNAH5Q8TE73 4624 aa6.39□□□□□ -1.39
NIF3L1-204ENST00000409357 UQCR11O14957 56 aa6.39□□□□□ -1.39
NIF3L1-204ENST00000409357 KRTAP13-3Q3SY46 172 aa6.39□□□□□ -1.39
NIF3L1-204ENST00000409357 C1orf134Q5TEV5 83 aa6.39□□□□□ -1.39
NIF3L1-204ENST00000409357 DMAC1Q96GE9 116 aa6.39□□□□□ -1.39
NIF3L1-204ENST00000409357 A0A1B0GU69 56 aa6.38□□□□□ -1.39
NIF3L1-204ENST00000409357 HSPG2P98160 4391 aa6.38□□□□□ -1.39
NIF3L1-204ENST00000409357 PRLHP81277 87 aa6.37□□□□□ -1.39
NIF3L1-204ENST00000409357 MIR22HGQ0VDD5 57 aa6.37□□□□□ -1.39
NIF3L1-204ENST00000409357 PCLOQ9Y6V0 5065 aa6.36□□□□□ -1.39
NIF3L1-204ENST00000409357 APOBP04114 4563 aaKnown RBP6.35□□□□□ -1.39
NIF3L1-204ENST00000409357 KRTAP17-1Q9BYP8 105 aa6.35□□□□□ -1.39
NIF3L1-204ENST00000409357 RYR1P21817 5038 aa6.34□□□□□ -1.4
NIF3L1-204ENST00000409357 Q6ZRN7 208 aaPredicted RBP6.32□□□□□ -1.4
NIF3L1-204ENST00000409357 IGHV6-1A0A0B4J1U7 121 aa6.31□□□□□ -1.4
NIF3L1-204ENST00000409357 CSAG1Q6PB30 78 aa6.31□□□□□ -1.4
NIF3L1-204ENST00000409357 ABCA13Q86UQ4 5058 aa6.31□□□□□ -1.4
NIF3L1-204ENST00000409357 CDK2AP2O75956 126 aa6.3□□□□□ -1.4
NIF3L1-204ENST00000409357 KRTAP10-2P60368 255 aa6.3□□□□□ -1.4
NIF3L1-204ENST00000409357 KRTAP13-1Q8IUC0 172 aa6.3□□□□□ -1.4
NIF3L1-204ENST00000409357 ZNF861PO60384 105 aa6.29□□□□□ -1.4
NIF3L1-204ENST00000409357 LINC00483Q53H64 154 aa6.29□□□□□ -1.4
NIF3L1-204ENST00000409357 A0A096LNI7 61 aa6.28□□□□□ -1.4
NIF3L1-204ENST00000409357 KRTAP4-5Q9BYR2 181 aa6.26□□□□□ -1.41
NIF3L1-204ENST00000409357 FAT1Q14517 4588 aa6.25□□□□□ -1.41
NIF3L1-204ENST00000409357 Q5W150 140 aa6.24□□□□□ -1.41
NIF3L1-204ENST00000409357 CHTF8P0CG12 524 aa6.23□□□□□ -1.41
NIF3L1-204ENST00000409357 C14orf177Q52M58 125 aa6.23□□□□□ -1.41
NIF3L1-204ENST00000409357 A0A087WTM6 91 aa6.22□□□□□ -1.41
NIF3L1-204ENST00000409357 ZNF706Q9Y5V0 76 aaPredicted RBP6.22□□□□□ -1.41
NIF3L1-204ENST00000409357 SRRM2Q9UQ35 2752 aaKnown RBP6.21□□□□□ -1.41
NIF3L1-204ENST00000409357 IGLV7-43P04211 117 aa6.21□□□□□ -1.42
NIF3L1-204ENST00000409357 KRTAP11-1Q8IUC1 163 aa6.21□□□□□ -1.42
NIF3L1-204ENST00000409357 ROMO1P60602 79 aa6.2□□□□□ -1.42
NIF3L1-204ENST00000409357 KRTAP25-1Q3LHN0 102 aa6.2□□□□□ -1.42
NIF3L1-204ENST00000409357 DNAH8Q96JB1 4490 aa6.19□□□□□ -1.42
NIF3L1-204ENST00000409357 IGKV2-30P06310 120 aa6.19□□□□□ -1.42
NIF3L1-204ENST00000409357 KRTAP10-1P60331 282 aa6.18□□□□□ -1.42
NIF3L1-204ENST00000409357 NOTCH2NLQ7Z3S9 236 aa6.17□□□□□ -1.42
NIF3L1-204ENST00000409357 MYCBP2O75592 4640 aa6.16□□□□□ -1.42
NIF3L1-204ENST00000409357 VPS13BQ7Z7G8 4022 aa6.15□□□□□ -1.43
NIF3L1-204ENST00000409357 A8MUU9 505 aa6.14□□□□□ -1.43
NIF3L1-204ENST00000409357 Q8N1X5 172 aa6.14□□□□□ -1.43
NIF3L1-204ENST00000409357 IGLV5-52A0A0A0MRZ9 124 aa6.13□□□□□ -1.43
NIF3L1-204ENST00000409357 FLG2Q5D862 2391 aaPredicted RBP6.13□□□□□ -1.43
NIF3L1-204ENST00000409357 IGLV9-49A0A0B4J1Y8 123 aa6.12□□□□□ -1.43
NIF3L1-204ENST00000409357 DMBT1Q9UGM3 2413 aaPredicted RBP6.1□□□□□ -1.43
NIF3L1-204ENST00000409357 SMR3BP02814 79 aaPredicted RBP6.1□□□□□ -1.43
NIF3L1-204ENST00000409357 KRTAP23-1A1A580 65 aa6.09□□□□□ -1.43
NIF3L1-204ENST00000409357 HERC1Q15751 4861 aa6.08□□□□□ -1.44
NIF3L1-204ENST00000409357 IGKV2D-30A0A075B6S6 120 aa6.08□□□□□ -1.44
NIF3L1-204ENST00000409357 A0A0A0MQY5 61 aa6.08□□□□□ -1.44
NIF3L1-204ENST00000409357 Q5VSD8 79 aa6.07□□□□□ -1.44
NIF3L1-204ENST00000409357 Q6ZSA8 131 aa6.05□□□□□ -1.44
NIF3L1-204ENST00000409357 LINC00304Q8N9R0 145 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms