RNA–Protein interactions for RNA: ENST00000401000.8

RPRD2-203, Transcript of regulation of nuclear pre-mRNA domain containing 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RPRD2, Length 7,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD2-203ENST00000401000 NOTCH1P46531 2555 aa5.25□□□□□ -1.57
RPRD2-203ENST00000401000 DSPP15924 2871 aaKnown RBP5.25□□□□□ -1.57
RPRD2-203ENST00000401000 STAB2Q8WWQ8 2551 aa5.24□□□□□ -1.57
RPRD2-203ENST00000401000 KRTAP1-4P0C5Y4 121 aa5.21□□□□□ -1.58
RPRD2-203ENST00000401000 CFAP47Q6ZTR5 3102 aa5.21□□□□□ -1.58
RPRD2-203ENST00000401000 MAP1AP78559 2803 aaPredicted RBP5.19□□□□□ -1.58
RPRD2-203ENST00000401000 USP34Q70CQ2 3546 aa5.17□□□□□ -1.58
RPRD2-203ENST00000401000 SPTBN5Q9NRC6 3674 aaKnown RBP5.16□□□□□ -1.58
RPRD2-203ENST00000401000 KRTAP10-10P60014 251 aa5.16□□□□□ -1.58
RPRD2-203ENST00000401000 SPEGQ15772 3267 aa5.16□□□□□ -1.58
RPRD2-203ENST00000401000 ITPR1Q14643 2758 aa5.15□□□□□ -1.58
RPRD2-203ENST00000401000 BAHCC1Q9P281 2608 aa5.15□□□□□ -1.59
RPRD2-203ENST00000401000 EYSQ5T1H1 3165 aa5.15□□□□□ -1.59
RPRD2-203ENST00000401000 CRYBG3Q68DQ2 2970 aa5.14□□□□□ -1.59
RPRD2-203ENST00000401000 ASH1LQ9NR48 2969 aaKnown RBP5.13□□□□□ -1.59
RPRD2-203ENST00000401000 ZZEF1O43149 2961 aa5.13□□□□□ -1.59
RPRD2-203ENST00000401000 NSD1Q96L73 2696 aaPredicted RBP5.12□□□□□ -1.59
RPRD2-203ENST00000401000 UBR5O95071 2799 aaPredicted RBP5.12□□□□□ -1.59
RPRD2-203ENST00000401000 UTP20O75691 2785 aaKnown RBP5.12□□□□□ -1.59
RPRD2-203ENST00000401000 PRO2289Q9P1D8 64 aa5.12□□□□□ -1.59
RPRD2-203ENST00000401000 FRYLO94915 3013 aa5.11□□□□□ -1.59
RPRD2-203ENST00000401000 DMXL2Q8TDJ6 3036 aa5.11□□□□□ -1.59
RPRD2-203ENST00000401000 BOD1L1Q8NFC6 3051 aa5.1□□□□□ -1.59
RPRD2-203ENST00000401000 TPRXLQ17RH7 258 aa5.1□□□□□ -1.59
RPRD2-203ENST00000401000 MYO15AQ9UKN7 3530 aa5.09□□□□□ -1.59
RPRD2-203ENST00000401000 NBEAQ8NFP9 2946 aa5.08□□□□□ -1.6
RPRD2-203ENST00000401000 IGSF10Q6WRI0 2623 aa5.07□□□□□ -1.6
RPRD2-203ENST00000401000 HIVEP1P15822 2718 aa5.07□□□□□ -1.6
RPRD2-203ENST00000401000 KRTAP12-2P59991 146 aa5.06□□□□□ -1.6
RPRD2-203ENST00000401000 ADGRG4Q8IZF6 3080 aa5.05□□□□□ -1.6
RPRD2-203ENST00000401000 COL12A1Q99715 3063 aa5.04□□□□□ -1.6
RPRD2-203ENST00000401000 KRTAP13-3Q3SY46 172 aa5.04□□□□□ -1.6
RPRD2-203ENST00000401000 TACC2O95359 2948 aa5.01□□□□□ -1.61
RPRD2-203ENST00000401000 DCHS1Q96JQ0 3298 aa5□□□□□ -1.61
RPRD2-203ENST00000401000 ATMQ13315 3056 aa4.99□□□□□ -1.61
RPRD2-203ENST00000401000 ASPMQ8IZT6 3477 aa4.97□□□□□ -1.61
RPRD2-203ENST00000401000 WDFY3Q8IZQ1 3526 aa4.97□□□□□ -1.61
RPRD2-203ENST00000401000 KRTAP21-3Q3LHN1 58 aa4.96□□□□□ -1.62
RPRD2-203ENST00000401000 TNRC18O15417 2968 aaPredicted RBP4.96□□□□□ -1.62
RPRD2-203ENST00000401000 KRTAP13-4Q3LI77 160 aa4.93□□□□□ -1.62
RPRD2-203ENST00000401000 CELSR2Q9HCU4 2923 aa4.9□□□□□ -1.62
RPRD2-203ENST00000401000 KRTAP12-1P59990 96 aa4.9□□□□□ -1.63
RPRD2-203ENST00000401000 LOC400499M0QZD8 3231 aa4.89□□□□□ -1.63
RPRD2-203ENST00000401000 DMXL1Q9Y485 3027 aa4.88□□□□□ -1.63
RPRD2-203ENST00000401000 CSMD1Q96PZ7 3565 aa4.87□□□□□ -1.63
RPRD2-203ENST00000401000 TGP01266 2768 aa4.86□□□□□ -1.63
RPRD2-203ENST00000401000 MUC3AQ02505 3323 aa4.83□□□□□ -1.64
RPRD2-203ENST00000401000 NBPF19A0A087WUL8 3843 aa4.82□□□□□ -1.64
RPRD2-203ENST00000401000 CELSR1Q9NYQ6 3014 aa4.82□□□□□ -1.64
RPRD2-203ENST00000401000 KRTAP15-1Q3LI76 137 aa4.82□□□□□ -1.64
RPRD2-203ENST00000401000 HRNRQ86YZ3 2850 aaPredicted RBP4.81□□□□□ -1.64
RPRD2-203ENST00000401000 DCHS2Q6V1P9 2916 aa4.81□□□□□ -1.64
RPRD2-203ENST00000401000 LAMA5O15230 3695 aa4.81□□□□□ -1.64
RPRD2-203ENST00000401000 ZFHX4Q86UP3 3567 aa4.8□□□□□ -1.64
RPRD2-203ENST00000401000 FLNCQ14315 2725 aa4.8□□□□□ -1.64
RPRD2-203ENST00000401000 DMDP11532 3685 aa4.79□□□□□ -1.64
RPRD2-203ENST00000401000 KRTAP3-1Q9BYR8 98 aa4.76□□□□□ -1.65
RPRD2-203ENST00000401000 FBN2P35556 2912 aa4.75□□□□□ -1.65
RPRD2-203ENST00000401000 TENM1Q9UKZ4 2725 aa4.74□□□□□ -1.65
RPRD2-203ENST00000401000 INE1O15225 51 aa4.72□□□□□ -1.65
RPRD2-203ENST00000401000 NF1P21359 2839 aa4.7□□□□□ -1.66
RPRD2-203ENST00000401000 NIPBLQ6KC79 2804 aaeCLIP4.7□□□□□ -1.66
RPRD2-203ENST00000401000 ZANQ9Y493 2812 aa4.69□□□□□ -1.66
RPRD2-203ENST00000401000 RELNP78509 3460 aa4.67□□□□□ -1.66
RPRD2-203ENST00000401000 TENM4Q6N022 2769 aa4.65□□□□□ -1.66
RPRD2-203ENST00000401000 KRTAP10-6P60371 365 aaPredicted RBP4.65□□□□□ -1.67
RPRD2-203ENST00000401000 SMG1Q96Q15 3661 aaKnown RBP4.64□□□□□ -1.67
RPRD2-203ENST00000401000 MXRA5Q9NR99 2828 aa4.62□□□□□ -1.67
RPRD2-203ENST00000401000 TENM2Q9NT68 2774 aa4.61□□□□□ -1.67
RPRD2-203ENST00000401000 TENM3Q9P273 2699 aa4.61□□□□□ -1.67
RPRD2-203ENST00000401000 SPENQ96T58 3664 aaKnown RBP4.61□□□□□ -1.67
RPRD2-203ENST00000401000 CRCT1Q9UGL9 99 aa4.58□□□□□ -1.68
RPRD2-203ENST00000401000 SVEP1Q4LDE5 3571 aa4.53□□□□□ -1.68
RPRD2-203ENST00000401000 PDZD2O15018 2839 aa4.52□□□□□ -1.69
RPRD2-203ENST00000401000 KRTAP10-12P60413 245 aa4.5□□□□□ -1.69
RPRD2-203ENST00000401000 ANK3Q12955 4377 aaKnown RBP4.47□□□□□ -1.69
RPRD2-203ENST00000401000 VWFP04275 2813 aa4.46□□□□□ -1.7
RPRD2-203ENST00000401000 KRTAP3-2Q9BYR7 98 aa4.45□□□□□ -1.7
RPRD2-203ENST00000401000 KRTAP3-3Q9BYR6 98 aa4.45□□□□□ -1.7
RPRD2-203ENST00000401000 ZFHX3Q15911 3703 aa4.43□□□□□ -1.7
RPRD2-203ENST00000401000 PKD1L1Q8TDX9 2849 aa4.42□□□□□ -1.7
RPRD2-203ENST00000401000 VPS13CQ709C8 3753 aa4.41□□□□□ -1.7
RPRD2-203ENST00000401000 CUBNO60494 3623 aa4.38□□□□□ -1.71
RPRD2-203ENST00000401000 HUWE1Q7Z6Z7 4374 aaKnown RBP4.37□□□□□ -1.71
RPRD2-203ENST00000401000 KRTAP12-3P60328 96 aa4.37□□□□□ -1.71
RPRD2-203ENST00000401000 LCE3AQ5TA76 89 aa4.36□□□□□ -1.71
RPRD2-203ENST00000401000 BSNQ9UPA5 3926 aa4.36□□□□□ -1.71
RPRD2-203ENST00000401000 AKAP9Q99996 3911 aa4.36□□□□□ -1.71
RPRD2-203ENST00000401000 MEGF8Q7Z7M0 2845 aa4.36□□□□□ -1.71
RPRD2-203ENST00000401000 KRTAP23-1A1A580 65 aa4.35□□□□□ -1.71
RPRD2-203ENST00000401000 TRRAPQ9Y4A5 3859 aa4.35□□□□□ -1.71
RPRD2-203ENST00000401000 MT1HL1P0DM35 61 aa4.32□□□□□ -1.72
RPRD2-203ENST00000401000 SRRM2Q9UQ35 2752 aaKnown RBP4.32□□□□□ -1.72
RPRD2-203ENST00000401000 ALMS1Q8TCU4 4167 aa4.3□□□□□ -1.72
RPRD2-203ENST00000401000 FBN3Q75N90 2809 aa4.3□□□□□ -1.72
RPRD2-203ENST00000401000 CSMD2Q7Z408 3487 aa4.27□□□□□ -1.73
RPRD2-203ENST00000401000 CSMD3Q7Z407 3707 aa4.27□□□□□ -1.73
RPRD2-203ENST00000401000 OTOGQ6ZRI0 2925 aa4.25□□□□□ -1.73
RPRD2-203ENST00000401000 KRTAP10-5P60370 271 aa4.24□□□□□ -1.73
RPRD2-203ENST00000401000 LORP23490 312 aaPredicted RBP4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms