RNA–Protein interactions for RNA: ENST00000400068.7

SIRPA-203, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 4,201 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-203ENST00000400068 PLA2G1BP04054 148 aaKnown RBP8.25□□□□□ -1.09
SIRPA-203ENST00000400068 IGKV2D-30A0A075B6S6 120 aa8.25□□□□□ -1.09
SIRPA-203ENST00000400068 IGKV2-30P06310 120 aa8.25□□□□□ -1.09
SIRPA-203ENST00000400068 SPINK7P58062 85 aa8.24□□□□□ -1.09
SIRPA-203ENST00000400068 C8orf17Q9NRJ1 99 aa8.24□□□□□ -1.09
SIRPA-203ENST00000400068 DMBT1Q9UGM3 2413 aaPredicted RBP8.22□□□□□ -1.09
SIRPA-203ENST00000400068 LUZP6Q538Z0 58 aa8.22□□□□□ -1.09
SIRPA-203ENST00000400068 TYMSOSQ8TAI1 123 aa8.22□□□□□ -1.09
SIRPA-203ENST00000400068 KRTAP10-2P60368 255 aa8.22□□□□□ -1.09
SIRPA-203ENST00000400068 SPINK1P00995 79 aa8.19□□□□□ -1.1
SIRPA-203ENST00000400068 A0A1B0GVX0 72 aa8.19□□□□□ -1.1
SIRPA-203ENST00000400068 MRPL34Q9BQ48 92 aaKnown RBP8.19□□□□□ -1.1
SIRPA-203ENST00000400068 Q6ZRN7 208 aaPredicted RBP8.18□□□□□ -1.1
SIRPA-203ENST00000400068 CSMD3Q7Z407 3707 aa8.17□□□□□ -1.1
SIRPA-203ENST00000400068 TP53AIP1Q9HCN2 124 aa8.16□□□□□ -1.1
SIRPA-203ENST00000400068 PLAC8Q9NZF1 115 aa8.15□□□□□ -1.1
SIRPA-203ENST00000400068 UQCR11O14957 56 aa8.13□□□□□ -1.11
SIRPA-203ENST00000400068 LINC00472Q9H8W2 130 aa8.13□□□□□ -1.11
SIRPA-203ENST00000400068 CRIPTQ9P021 101 aa8.13□□□□□ -1.11
SIRPA-203ENST00000400068 Q6ZR54 194 aa8.12□□□□□ -1.11
SIRPA-203ENST00000400068 Q96NJ1 140 aa8.12□□□□□ -1.11
SIRPA-203ENST00000400068 SPRR1BP22528 89 aa8.11□□□□□ -1.11
SIRPA-203ENST00000400068 KRTAP10-1P60331 282 aa8.11□□□□□ -1.11
SIRPA-203ENST00000400068 MMP24-AS1A0A0U1RRL7 71 aa8.09□□□□□ -1.11
SIRPA-203ENST00000400068 FBN3Q75N90 2809 aa8.09□□□□□ -1.11
SIRPA-203ENST00000400068 NDUFAF8A1L188 74 aa8.09□□□□□ -1.11
SIRPA-203ENST00000400068 C9orf92A6NGG3 77 aa8.07□□□□□ -1.12
SIRPA-203ENST00000400068 H3BPC8 53 aa8.06□□□□□ -1.12
SIRPA-203ENST00000400068 COL7A1Q02388 2944 aa8.06□□□□□ -1.12
SIRPA-203ENST00000400068 A0A087X002 238 aa8.03□□□□□ -1.12
SIRPA-203ENST00000400068 NOTCH2NLQ7Z3S9 236 aa8.03□□□□□ -1.12
SIRPA-203ENST00000400068 ROMO1P60602 79 aa8.02□□□□□ -1.12
SIRPA-203ENST00000400068 LINC00304Q8N9R0 145 aa8.01□□□□□ -1.13
SIRPA-203ENST00000400068 LINC01558Q9Y6Z2 57 aa7.98□□□□□ -1.13
SIRPA-203ENST00000400068 FAM229AH3BQW9 127 aa7.98□□□□□ -1.13
SIRPA-203ENST00000400068 KRTAP13-1Q8IUC0 172 aa7.96□□□□□ -1.13
SIRPA-203ENST00000400068 ACYP2P14621 99 aa7.96□□□□□ -1.14
SIRPA-203ENST00000400068 MEGF8Q7Z7M0 2845 aa7.96□□□□□ -1.14
SIRPA-203ENST00000400068 KRTAP29-1A8MX34 341 aaPredicted RBP7.95□□□□□ -1.14
SIRPA-203ENST00000400068 SPANXA2-OT1Q8N9U9 137 aa7.95□□□□□ -1.14
SIRPA-203ENST00000400068 J3QL48 77 aa7.95□□□□□ -1.14
SIRPA-203ENST00000400068 LINC00483Q53H64 154 aa7.94□□□□□ -1.14
SIRPA-203ENST00000400068 SEC61BP60468 96 aaKnown RBP7.91□□□□□ -1.14
SIRPA-203ENST00000400068 Q8N1X5 172 aa7.9□□□□□ -1.14
SIRPA-203ENST00000400068 ZCCHC13Q8WW36 166 aaKnown RBP7.85□□□□□ -1.15
SIRPA-203ENST00000400068 HRES1P13985 223 aa7.85□□□□□ -1.15
SIRPA-203ENST00000400068 Q5W150 140 aa7.85□□□□□ -1.15
SIRPA-203ENST00000400068 HUWE1Q7Z6Z7 4374 aaKnown RBP7.85□□□□□ -1.15
SIRPA-203ENST00000400068 IGLV7-46A0A075B6I9 117 aa7.85□□□□□ -1.15
SIRPA-203ENST00000400068 KRTAP13-2Q52LG2 175 aa7.83□□□□□ -1.16
SIRPA-203ENST00000400068 DMAC1Q96GE9 116 aa7.79□□□□□ -1.16
SIRPA-203ENST00000400068 LCE6AA0A183 80 aa7.78□□□□□ -1.16
SIRPA-203ENST00000400068 ASB16-AS1Q495Z4 193 aa7.76□□□□□ -1.17
SIRPA-203ENST00000400068 C20orf166-AS1Q96NR2 134 aa7.75□□□□□ -1.17
SIRPA-203ENST00000400068 KRTAP25-1Q3LHN0 102 aa7.74□□□□□ -1.17
SIRPA-203ENST00000400068 ANK2Q01484 3957 aa7.7□□□□□ -1.18
SIRPA-203ENST00000400068 DNAH10Q8IVF4 4471 aa7.67□□□□□ -1.18
SIRPA-203ENST00000400068 A8MUU9 505 aa7.63□□□□□ -1.19
SIRPA-203ENST00000400068 Q6ZSA8 131 aa7.63□□□□□ -1.19
SIRPA-203ENST00000400068 Q5VSD8 79 aa7.62□□□□□ -1.19
SIRPA-203ENST00000400068 DNAH9Q9NYC9 4486 aa7.62□□□□□ -1.19
SIRPA-203ENST00000400068 KRTAP1-4P0C5Y4 121 aa7.61□□□□□ -1.19
SIRPA-203ENST00000400068 SPATA8Q6RVD6 105 aa7.58□□□□□ -1.2
SIRPA-203ENST00000400068 PLECQ15149 4684 aaKnown RBP7.57□□□□□ -1.2
SIRPA-203ENST00000400068 A0A0D9SG42 100 aa7.51□□□□□ -1.21
SIRPA-203ENST00000400068 DNHD1Q96M86 4753 aa7.51□□□□□ -1.21
SIRPA-203ENST00000400068 LYSTQ99698 3801 aa7.49□□□□□ -1.21
SIRPA-203ENST00000400068 PRKDCP78527 4128 aaKnown RBP7.47□□□□□ -1.21
SIRPA-203ENST00000400068 KRTAP21-3Q3LHN1 58 aa7.46□□□□□ -1.22
SIRPA-203ENST00000400068 STARD9Q9P2P6 4700 aa7.43□□□□□ -1.22
SIRPA-203ENST00000400068 A0A1B0GU33 70 aa7.41□□□□□ -1.22
SIRPA-203ENST00000400068 P0C880 135 aa7.4□□□□□ -1.22
SIRPA-203ENST00000400068 DNAH1Q9P2D7 4330 aa7.4□□□□□ -1.23
SIRPA-203ENST00000400068 CMYA5Q8N3K9 4069 aa7.36□□□□□ -1.23
SIRPA-203ENST00000400068 DNAH11Q96DT5 4516 aa7.36□□□□□ -1.23
SIRPA-203ENST00000400068 CAMK2N1Q7Z7J9 78 aa7.34□□□□□ -1.24
SIRPA-203ENST00000400068 KMT2AQ03164 3969 aa7.33□□□□□ -1.24
SIRPA-203ENST00000400068 COX6B2Q6YFQ2 88 aa7.3□□□□□ -1.24
SIRPA-203ENST00000400068 RPS29P62273 56 aaKnown RBP7.29□□□□□ -1.24
SIRPA-203ENST00000400068 KRTAP13-3Q3SY46 172 aa7.28□□□□□ -1.24
SIRPA-203ENST00000400068 DNAH7Q8WXX0 4024 aa7.27□□□□□ -1.25
SIRPA-203ENST00000400068 A0A1B0GVY2 172 aa7.27□□□□□ -1.25
SIRPA-203ENST00000400068 DNAH3Q8TD57 4116 aa7.24□□□□□ -1.25
SIRPA-203ENST00000400068 S4R3F8 94 aa7.24□□□□□ -1.25
SIRPA-203ENST00000400068 VPS13DQ5THJ4 4388 aa7.24□□□□□ -1.25
SIRPA-203ENST00000400068 C10orf95Q9H7T3 257 aa7.21□□□□□ -1.26
SIRPA-203ENST00000400068 H1FX-AS1Q4G0G2 97 aa7.16□□□□□ -1.26
SIRPA-203ENST00000400068 RPL37P61927 97 aaKnown RBP7.14□□□□□ -1.27
SIRPA-203ENST00000400068 DNAH5Q8TE73 4624 aa7.14□□□□□ -1.27
SIRPA-203ENST00000400068 FAT1Q14517 4588 aa7.13□□□□□ -1.27
SIRPA-203ENST00000400068 LRP1BQ9NZR2 4599 aa7.13□□□□□ -1.27
SIRPA-203ENST00000400068 XP32Q5T750 250 aa7.12□□□□□ -1.27
SIRPA-203ENST00000400068 DNAH8Q96JB1 4490 aa7.12□□□□□ -1.27
SIRPA-203ENST00000400068 DNAH17Q9UFH2 4485 aa7.11□□□□□ -1.27
SIRPA-203ENST00000400068 FRAS1Q86XX4 4008 aa7.09□□□□□ -1.27
SIRPA-203ENST00000400068 DNAH2Q9P225 4427 aa7.08□□□□□ -1.28
SIRPA-203ENST00000400068 DNAH6Q9C0G6 4158 aa7.06□□□□□ -1.28
SIRPA-203ENST00000400068 KRTAP10-8P60410 259 aa7.04□□□□□ -1.28
SIRPA-203ENST00000400068 DYNC2H1Q8NCM8 4307 aaKnown RBP6.98□□□□□ -1.29
SIRPA-203ENST00000400068 R4GN34 69 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 124 ms