RNA–Protein interactions for RNA: ENST00000399408.6

ABCC1-201, Transcript of ATP binding cassette subfamily C member 1, humanhuman

TSL 5 BASIC

Gene ABCC1, Length 6,594 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC1-201ENST00000399408 KRTAP21-3Q3LHN1 58 aa8.56□□□□□ -1.04
ABCC1-201ENST00000399408 DNAH14Q0VDD8 3507 aa8.52□□□□□ -1.04
ABCC1-201ENST00000399408 EYSQ5T1H1 3165 aa8.5□□□□□ -1.05
ABCC1-201ENST00000399408 ZZEF1O43149 2961 aa8.49□□□□□ -1.05
ABCC1-201ENST00000399408 PLAC4Q8WY50 150 aa8.49□□□□□ -1.05
ABCC1-201ENST00000399408 ASH1LQ9NR48 2969 aaKnown RBP8.49□□□□□ -1.05
ABCC1-201ENST00000399408 TENM4Q6N022 2769 aa8.49□□□□□ -1.05
ABCC1-201ENST00000399408 COL6A3P12111 3177 aa8.47□□□□□ -1.05
ABCC1-201ENST00000399408 REV3LO60673 3130 aa8.46□□□□□ -1.06
ABCC1-201ENST00000399408 A8MU10 97 aa8.44□□□□□ -1.06
ABCC1-201ENST00000399408 A6NN06 94 aa8.43□□□□□ -1.06
ABCC1-201ENST00000399408 CELSR2Q9HCU4 2923 aa8.42□□□□□ -1.06
ABCC1-201ENST00000399408 A8MUU9 505 aa8.42□□□□□ -1.06
ABCC1-201ENST00000399408 ZANQ9Y493 2812 aa8.41□□□□□ -1.06
ABCC1-201ENST00000399408 A0A0A0MQY5 61 aa8.39□□□□□ -1.07
ABCC1-201ENST00000399408 C20orf166-AS1Q96NR2 134 aa8.38□□□□□ -1.07
ABCC1-201ENST00000399408 TNRC18O15417 2968 aaPredicted RBP8.38□□□□□ -1.07
ABCC1-201ENST00000399408 H3BS24 57 aa8.37□□□□□ -1.07
ABCC1-201ENST00000399408 HRNRQ86YZ3 2850 aaPredicted RBP8.35□□□□□ -1.07
ABCC1-201ENST00000399408 DCHS2Q6V1P9 2916 aa8.34□□□□□ -1.07
ABCC1-201ENST00000399408 KRTAP1-4P0C5Y4 121 aa8.34□□□□□ -1.07
ABCC1-201ENST00000399408 KRTAP25-1Q3LHN0 102 aa8.32□□□□□ -1.08
ABCC1-201ENST00000399408 CRYBG3Q68DQ2 2970 aa8.3□□□□□ -1.08
ABCC1-201ENST00000399408 SPTBN5Q9NRC6 3674 aaKnown RBP8.29□□□□□ -1.08
ABCC1-201ENST00000399408 CFAP47Q6ZTR5 3102 aa8.29□□□□□ -1.08
ABCC1-201ENST00000399408 DMXL1Q9Y485 3027 aa8.26□□□□□ -1.09
ABCC1-201ENST00000399408 USP34Q70CQ2 3546 aa8.22□□□□□ -1.09
ABCC1-201ENST00000399408 XP32Q5T750 250 aa8.19□□□□□ -1.1
ABCC1-201ENST00000399408 FBN2P35556 2912 aa8.15□□□□□ -1.1
ABCC1-201ENST00000399408 NF1P21359 2839 aa8.13□□□□□ -1.11
ABCC1-201ENST00000399408 KRTAP16-1A8MUX0 517 aa8.11□□□□□ -1.11
ABCC1-201ENST00000399408 SPEGQ15772 3267 aa8.1□□□□□ -1.11
ABCC1-201ENST00000399408 TNP1P09430 55 aa8.07□□□□□ -1.12
ABCC1-201ENST00000399408 LOC400499M0QZD8 3231 aa8.06□□□□□ -1.12
ABCC1-201ENST00000399408 TPRXLQ17RH7 258 aa8.04□□□□□ -1.12
ABCC1-201ENST00000399408 TENM3Q9P273 2699 aa8.01□□□□□ -1.13
ABCC1-201ENST00000399408 TENM1Q9UKZ4 2725 aa7.98□□□□□ -1.13
ABCC1-201ENST00000399408 MXRA5Q9NR99 2828 aa7.97□□□□□ -1.13
ABCC1-201ENST00000399408 H0YAA0 97 aa7.95□□□□□ -1.14
ABCC1-201ENST00000399408 KRTAP13-3Q3SY46 172 aa7.95□□□□□ -1.14
ABCC1-201ENST00000399408 TENM2Q9NT68 2774 aa7.95□□□□□ -1.14
ABCC1-201ENST00000399408 NDUFAF8A1L188 74 aa7.92□□□□□ -1.14
ABCC1-201ENST00000399408 CELSR1Q9NYQ6 3014 aa7.89□□□□□ -1.15
ABCC1-201ENST00000399408 A0A1B0GVY2 172 aa7.89□□□□□ -1.15
ABCC1-201ENST00000399408 PP632Q6XCG6 107 aa7.88□□□□□ -1.15
ABCC1-201ENST00000399408 C10orf95Q9H7T3 257 aa7.84□□□□□ -1.15
ABCC1-201ENST00000399408 KRTAP10-8P60410 259 aa7.83□□□□□ -1.16
ABCC1-201ENST00000399408 MYO15AQ9UKN7 3530 aa7.82□□□□□ -1.16
ABCC1-201ENST00000399408 P0C880 135 aa7.79□□□□□ -1.16
ABCC1-201ENST00000399408 TGP01266 2768 aa7.78□□□□□ -1.16
ABCC1-201ENST00000399408 PDZD2O15018 2839 aa7.77□□□□□ -1.17
ABCC1-201ENST00000399408 RELNP78509 3460 aa7.75□□□□□ -1.17
ABCC1-201ENST00000399408 KRTAP10-10P60014 251 aa7.72□□□□□ -1.17
ABCC1-201ENST00000399408 PKD1L1Q8TDX9 2849 aa7.7□□□□□ -1.18
ABCC1-201ENST00000399408 DCHS1Q96JQ0 3298 aa7.69□□□□□ -1.18
ABCC1-201ENST00000399408 WDFY3Q8IZQ1 3526 aa7.68□□□□□ -1.18
ABCC1-201ENST00000399408 VWFP04275 2813 aa7.58□□□□□ -1.2
ABCC1-201ENST00000399408 OTOGQ6ZRI0 2925 aa7.57□□□□□ -1.2
ABCC1-201ENST00000399408 PRO2289Q9P1D8 64 aa7.57□□□□□ -1.2
ABCC1-201ENST00000399408 FBN1P35555 2871 aaKnown RBP7.5□□□□□ -1.21
ABCC1-201ENST00000399408 KRTAP12-2P59991 146 aa7.48□□□□□ -1.21
ABCC1-201ENST00000399408 LAMA5O15230 3695 aa7.48□□□□□ -1.21
ABCC1-201ENST00000399408 KRTAP3-1Q9BYR8 98 aa7.47□□□□□ -1.21
ABCC1-201ENST00000399408 ASPMQ8IZT6 3477 aa7.47□□□□□ -1.21
ABCC1-201ENST00000399408 ZFHX4Q86UP3 3567 aa7.47□□□□□ -1.21
ABCC1-201ENST00000399408 ANK3Q12955 4377 aaKnown RBP7.41□□□□□ -1.22
ABCC1-201ENST00000399408 NBPF19A0A087WUL8 3843 aa7.41□□□□□ -1.22
ABCC1-201ENST00000399408 KRTAP12-1P59990 96 aa7.37□□□□□ -1.23
ABCC1-201ENST00000399408 KRTAP13-4Q3LI77 160 aa7.34□□□□□ -1.23
ABCC1-201ENST00000399408 CSMD1Q96PZ7 3565 aa7.28□□□□□ -1.24
ABCC1-201ENST00000399408 DMDP11532 3685 aa7.27□□□□□ -1.25
ABCC1-201ENST00000399408 FBN3Q75N90 2809 aa7.27□□□□□ -1.25
ABCC1-201ENST00000399408 ZFHX3Q15911 3703 aa7.24□□□□□ -1.25
ABCC1-201ENST00000399408 KRTAP10-6P60371 365 aaPredicted RBP7.24□□□□□ -1.25
ABCC1-201ENST00000399408 SMG1Q96Q15 3661 aaKnown RBP7.24□□□□□ -1.25
ABCC1-201ENST00000399408 SRRM2Q9UQ35 2752 aaKnown RBP7.21□□□□□ -1.26
ABCC1-201ENST00000399408 MT1HL1P0DM35 61 aa7.19□□□□□ -1.26
ABCC1-201ENST00000399408 MEGF8Q7Z7M0 2845 aa7.17□□□□□ -1.26
ABCC1-201ENST00000399408 MUC3AQ02505 3323 aa7.17□□□□□ -1.26
ABCC1-201ENST00000399408 KRTAP10-4P60372 401 aaPredicted RBP7.08□□□□□ -1.28
ABCC1-201ENST00000399408 SVEP1Q4LDE5 3571 aa7.06□□□□□ -1.28
ABCC1-201ENST00000399408 CSMD2Q7Z408 3487 aa7.06□□□□□ -1.28
ABCC1-201ENST00000399408 TRRAPQ9Y4A5 3859 aa7.06□□□□□ -1.28
ABCC1-201ENST00000399408 KRTAP3-3Q9BYR6 98 aa7.01□□□□□ -1.29
ABCC1-201ENST00000399408 KRTAP3-2Q9BYR7 98 aa7□□□□□ -1.29
ABCC1-201ENST00000399408 COL7A1Q02388 2944 aa6.99□□□□□ -1.29
ABCC1-201ENST00000399408 SPENQ96T58 3664 aaKnown RBP6.98□□□□□ -1.29
ABCC1-201ENST00000399408 HUWE1Q7Z6Z7 4374 aaKnown RBP6.98□□□□□ -1.29
ABCC1-201ENST00000399408 KRTAP15-1Q3LI76 137 aa6.94□□□□□ -1.3
ABCC1-201ENST00000399408 KRTAP4-5Q9BYR2 181 aa6.91□□□□□ -1.3
ABCC1-201ENST00000399408 CUBNO60494 3623 aa6.86□□□□□ -1.31
ABCC1-201ENST00000399408 BSNQ9UPA5 3926 aa6.85□□□□□ -1.31
ABCC1-201ENST00000399408 ALMS1Q8TCU4 4167 aa6.78□□□□□ -1.32
ABCC1-201ENST00000399408 KRTAP10-12P60413 245 aa6.73□□□□□ -1.33
ABCC1-201ENST00000399408 DNAH9Q9NYC9 4486 aa6.65□□□□□ -1.35
ABCC1-201ENST00000399408 DNAH5Q8TE73 4624 aa6.63□□□□□ -1.35
ABCC1-201ENST00000399408 VPS13CQ709C8 3753 aa6.61□□□□□ -1.35
ABCC1-201ENST00000399408 LORP23490 312 aaPredicted RBP6.58□□□□□ -1.36
ABCC1-201ENST00000399408 KRTAP23-1A1A580 65 aa6.57□□□□□ -1.36
ABCC1-201ENST00000399408 KRTAP12-3P60328 96 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms