RNA–Protein interactions for RNA: ENST00000398645.6

KDM2A-202, Transcript of lysine demethylase 2A, humanhuman

TSL 1 (best) BASIC

Gene KDM2A, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2A-202ENST00000398645 DSPP15924 2871 aaKnown RBP10.28□□□□□ -0.76
KDM2A-202ENST00000398645 TEP1Q99973 2627 aaKnown RBP10.28□□□□□ -0.76
KDM2A-202ENST00000398645 MAP1AP78559 2803 aaPredicted RBP10.27□□□□□ -0.77
KDM2A-202ENST00000398645 ASH1LQ9NR48 2969 aaKnown RBP10.26□□□□□ -0.77
KDM2A-202ENST00000398645 MYO15AQ9UKN7 3530 aa10.26□□□□□ -0.77
KDM2A-202ENST00000398645 NOTCH1P46531 2555 aa10.23□□□□□ -0.77
KDM2A-202ENST00000398645 KRTAP10-10P60014 251 aa10.23□□□□□ -0.77
KDM2A-202ENST00000398645 APCP25054 2843 aa10.22□□□□□ -0.77
KDM2A-202ENST00000398645 BOD1L1Q8NFC6 3051 aa10.21□□□□□ -0.77
KDM2A-202ENST00000398645 FRYLO94915 3013 aa10.19□□□□□ -0.78
KDM2A-202ENST00000398645 DCHS1Q96JQ0 3298 aa10.18□□□□□ -0.78
KDM2A-202ENST00000398645 PP632Q6XCG6 107 aa10.15□□□□□ -0.78
KDM2A-202ENST00000398645 BAHCC1Q9P281 2608 aa10.15□□□□□ -0.78
KDM2A-202ENST00000398645 KRTAP1-4P0C5Y4 121 aa10.11□□□□□ -0.79
KDM2A-202ENST00000398645 SETXQ7Z333 2677 aaKnown RBP10.11□□□□□ -0.79
KDM2A-202ENST00000398645 WDFY3Q8IZQ1 3526 aa10.11□□□□□ -0.79
KDM2A-202ENST00000398645 ASPMQ8IZT6 3477 aa10.08□□□□□ -0.8
KDM2A-202ENST00000398645 ATMQ13315 3056 aa10.06□□□□□ -0.8
KDM2A-202ENST00000398645 NBEAQ8NFP9 2946 aa10.05□□□□□ -0.8
KDM2A-202ENST00000398645 HIVEP1P15822 2718 aa10.04□□□□□ -0.8
KDM2A-202ENST00000398645 COL12A1Q99715 3063 aa10.03□□□□□ -0.8
KDM2A-202ENST00000398645 ZNF292O60281 2723 aa10.01□□□□□ -0.81
KDM2A-202ENST00000398645 TACC2O95359 2948 aa10□□□□□ -0.81
KDM2A-202ENST00000398645 NSD1Q96L73 2696 aaPredicted RBP10□□□□□ -0.81
KDM2A-202ENST00000398645 ZZEF1O43149 2961 aa9.99□□□□□ -0.81
KDM2A-202ENST00000398645 ITPR2Q14571 2701 aa9.99□□□□□ -0.81
KDM2A-202ENST00000398645 KRTAP12-2P59991 146 aa9.98□□□□□ -0.81
KDM2A-202ENST00000398645 UBR5O95071 2799 aaPredicted RBP9.97□□□□□ -0.81
KDM2A-202ENST00000398645 ADGRG4Q8IZF6 3080 aa9.97□□□□□ -0.81
KDM2A-202ENST00000398645 UTP20O75691 2785 aaKnown RBP9.94□□□□□ -0.82
KDM2A-202ENST00000398645 EYSQ5T1H1 3165 aa9.94□□□□□ -0.82
KDM2A-202ENST00000398645 LOC400499M0QZD8 3231 aa9.93□□□□□ -0.82
KDM2A-202ENST00000398645 ITPR1Q14643 2758 aa9.93□□□□□ -0.82
KDM2A-202ENST00000398645 CSMD1Q96PZ7 3565 aa9.87□□□□□ -0.83
KDM2A-202ENST00000398645 PRO2289Q9P1D8 64 aa9.83□□□□□ -0.84
KDM2A-202ENST00000398645 ZFHX4Q86UP3 3567 aa9.8□□□□□ -0.84
KDM2A-202ENST00000398645 KMT2BQ9UMN6 2715 aaPredicted RBP9.79□□□□□ -0.84
KDM2A-202ENST00000398645 TPRXLQ17RH7 258 aa9.75□□□□□ -0.85
KDM2A-202ENST00000398645 KRTAP13-3Q3SY46 172 aa9.74□□□□□ -0.85
KDM2A-202ENST00000398645 IGSF10Q6WRI0 2623 aa9.73□□□□□ -0.85
KDM2A-202ENST00000398645 LAMA5O15230 3695 aa9.71□□□□□ -0.85
KDM2A-202ENST00000398645 DMXL1Q9Y485 3027 aa9.61□□□□□ -0.87
KDM2A-202ENST00000398645 CELSR2Q9HCU4 2923 aa9.61□□□□□ -0.87
KDM2A-202ENST00000398645 TNRC18O15417 2968 aaPredicted RBP9.6□□□□□ -0.87
KDM2A-202ENST00000398645 NBPF19A0A087WUL8 3843 aa9.53□□□□□ -0.88
KDM2A-202ENST00000398645 KRTAP12-1P59990 96 aa9.53□□□□□ -0.88
KDM2A-202ENST00000398645 RELNP78509 3460 aa9.49□□□□□ -0.89
KDM2A-202ENST00000398645 KRTAP13-4Q3LI77 160 aa9.49□□□□□ -0.89
KDM2A-202ENST00000398645 KRTAP15-1Q3LI76 137 aa9.49□□□□□ -0.89
KDM2A-202ENST00000398645 CRCT1Q9UGL9 99 aa9.47□□□□□ -0.89
KDM2A-202ENST00000398645 DCHS2Q6V1P9 2916 aa9.43□□□□□ -0.9
KDM2A-202ENST00000398645 TGP01266 2768 aa9.4□□□□□ -0.9
KDM2A-202ENST00000398645 CELSR1Q9NYQ6 3014 aa9.39□□□□□ -0.91
KDM2A-202ENST00000398645 SMG1Q96Q15 3661 aaKnown RBP9.35□□□□□ -0.91
KDM2A-202ENST00000398645 KRTAP3-1Q9BYR8 98 aa9.31□□□□□ -0.92
KDM2A-202ENST00000398645 FBN2P35556 2912 aa9.27□□□□□ -0.93
KDM2A-202ENST00000398645 DMDP11532 3685 aa9.26□□□□□ -0.93
KDM2A-202ENST00000398645 SVEP1Q4LDE5 3571 aa9.25□□□□□ -0.93
KDM2A-202ENST00000398645 HRNRQ86YZ3 2850 aaPredicted RBP9.24□□□□□ -0.93
KDM2A-202ENST00000398645 SPENQ96T58 3664 aaKnown RBP9.22□□□□□ -0.93
KDM2A-202ENST00000398645 NF1P21359 2839 aa9.21□□□□□ -0.94
KDM2A-202ENST00000398645 TENM2Q9NT68 2774 aa9.19□□□□□ -0.94
KDM2A-202ENST00000398645 KRTAP21-3Q3LHN1 58 aa9.17□□□□□ -0.94
KDM2A-202ENST00000398645 CUBNO60494 3623 aa9.16□□□□□ -0.94
KDM2A-202ENST00000398645 TENM4Q6N022 2769 aa9.16□□□□□ -0.94
KDM2A-202ENST00000398645 TENM1Q9UKZ4 2725 aa9.16□□□□□ -0.94
KDM2A-202ENST00000398645 FLNCQ14315 2725 aa9.13□□□□□ -0.95
KDM2A-202ENST00000398645 ZANQ9Y493 2812 aa9.1□□□□□ -0.95
KDM2A-202ENST00000398645 KRTAP10-6P60371 365 aaPredicted RBP9.01□□□□□ -0.97
KDM2A-202ENST00000398645 NIPBLQ6KC79 2804 aaeCLIP8.94□□□□□ -0.984e-7■■■■■ 50.1
KDM2A-202ENST00000398645 MXRA5Q9NR99 2828 aa8.92□□□□□ -0.98
KDM2A-202ENST00000398645 VWFP04275 2813 aa8.9□□□□□ -0.98
KDM2A-202ENST00000398645 TENM3Q9P273 2699 aa8.86□□□□□ -0.99
KDM2A-202ENST00000398645 PKD1L1Q8TDX9 2849 aa8.81□□□□□ -1
KDM2A-202ENST00000398645 CSMD2Q7Z408 3487 aa8.79□□□□□ -1
KDM2A-202ENST00000398645 KRTAP10-12P60413 245 aa8.79□□□□□ -1
KDM2A-202ENST00000398645 PDZD2O15018 2839 aa8.75□□□□□ -1.01
KDM2A-202ENST00000398645 ZFHX3Q15911 3703 aa8.73□□□□□ -1.01
KDM2A-202ENST00000398645 ANK3Q12955 4377 aaKnown RBP8.73□□□□□ -1.01
KDM2A-202ENST00000398645 INE1O15225 51 aa8.72□□□□□ -1.01
KDM2A-202ENST00000398645 VPS13CQ709C8 3753 aa8.65□□□□□ -1.03
KDM2A-202ENST00000398645 LCE3AQ5TA76 89 aa8.64□□□□□ -1.03
KDM2A-202ENST00000398645 KRTAP3-3Q9BYR6 98 aa8.64□□□□□ -1.03
KDM2A-202ENST00000398645 CSMD3Q7Z407 3707 aa8.64□□□□□ -1.03
KDM2A-202ENST00000398645 KRTAP3-2Q9BYR7 98 aa8.63□□□□□ -1.03
KDM2A-202ENST00000398645 MUC3AQ02505 3323 aa8.58□□□□□ -1.04
KDM2A-202ENST00000398645 TRRAPQ9Y4A5 3859 aa8.53□□□□□ -1.04
KDM2A-202ENST00000398645 KRTAP10-5P60370 271 aa8.53□□□□□ -1.04
KDM2A-202ENST00000398645 KRTAP12-3P60328 96 aa8.52□□□□□ -1.05
KDM2A-202ENST00000398645 HUWE1Q7Z6Z7 4374 aaKnown RBP8.52□□□□□ -1.05
KDM2A-202ENST00000398645 KRTAP4-5Q9BYR2 181 aa8.49□□□□□ -1.05
KDM2A-202ENST00000398645 LORP23490 312 aaPredicted RBP8.48□□□□□ -1.05
KDM2A-202ENST00000398645 MEGF8Q7Z7M0 2845 aa8.43□□□□□ -1.06
KDM2A-202ENST00000398645 BSNQ9UPA5 3926 aa8.41□□□□□ -1.06
KDM2A-202ENST00000398645 MT1HL1P0DM35 61 aa8.4□□□□□ -1.06
KDM2A-202ENST00000398645 SRRM2Q9UQ35 2752 aaKnown RBP8.39□□□□□ -1.07
KDM2A-202ENST00000398645 FBN3Q75N90 2809 aa8.36□□□□□ -1.07
KDM2A-202ENST00000398645 AKAP9Q99996 3911 aa8.3□□□□□ -1.08
KDM2A-202ENST00000398645 FBN1P35555 2871 aaKnown RBP8.25□□□□□ -1.09
KDM2A-202ENST00000398645 COL7A1Q02388 2944 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 120.5 ms