RNA–Protein interactions for RNA: ENST00000398005.3

HMGN2P39-201, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 39, humanhuman

BASIC

Gene HMGN2P39, Length 273 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P39-201ENST00000398005 SPTA1P02549 2419 aa0.19□□□□□ -2.38
HMGN2P39-201ENST00000398005 HUWE1Q7Z6Z7 4374 aaKnown RBP0.19□□□□□ -2.38
HMGN2P39-201ENST00000398005 NCOR2Q9Y618 2525 aa0.19□□□□□ -2.38
HMGN2P39-201ENST00000398005 PRRC2CQ9Y520 2896 aaKnown RBP0.19□□□□□ -2.38
HMGN2P39-201ENST00000398005 SPRR2AP35326 72 aa0.19□□□□□ -2.38
HMGN2P39-201ENST00000398005 KRTAP6-2Q3LI66 62 aa0.19□□□□□ -2.38
HMGN2P39-201ENST00000398005 KMT2AQ03164 3969 aa0.18□□□□□ -2.38
HMGN2P39-201ENST00000398005 CHD8Q9HCK8 2581 aa0.18□□□□□ -2.38
HMGN2P39-201ENST00000398005 LPAP08519 4548 aa0.18□□□□□ -2.38
HMGN2P39-201ENST00000398005 ACANP16112 2415 aa0.17□□□□□ -2.38
HMGN2P39-201ENST00000398005 NAV2Q8IVL1 2488 aa0.17□□□□□ -2.38
HMGN2P39-201ENST00000398005 HIVEP3Q5T1R4 2406 aa0.17□□□□□ -2.38
HMGN2P39-201ENST00000398005 USP24Q9UPU5 2620 aa0.17□□□□□ -2.38
HMGN2P39-201ENST00000398005 MYCBP2O75592 4640 aa0.16□□□□□ -2.38
HMGN2P39-201ENST00000398005 CLPSL2Q6UWE3 100 aa0.16□□□□□ -2.38
HMGN2P39-201ENST00000398005 VPS13BQ7Z7G8 4022 aa0.16□□□□□ -2.38
HMGN2P39-201ENST00000398005 SYNE2Q8WXH0 6885 aaKnown RBP0.16□□□□□ -2.38
HMGN2P39-201ENST00000398005 CACNA1AO00555 2505 aa0.16□□□□□ -2.38
HMGN2P39-201ENST00000398005 HECTD1Q9ULT8 2610 aa0.16□□□□□ -2.38
HMGN2P39-201ENST00000398005 FAT4Q6V0I7 4981 aa0.15□□□□□ -2.38
HMGN2P39-201ENST00000398005 MT1AP04731 61 aa0.15□□□□□ -2.39
HMGN2P39-201ENST00000398005 SPART-AS1P0CW21 52 aa0.15□□□□□ -2.39
HMGN2P39-201ENST00000398005 SNRPGP62308 76 aaKnown RBP0.15□□□□□ -2.39
HMGN2P39-201ENST00000398005 SPRR2GQ9BYE4 73 aa0.15□□□□□ -2.39
HMGN2P39-201ENST00000398005 DSTQ03001 7570 aaKnown RBP0.15□□□□□ -2.39
HMGN2P39-201ENST00000398005 HSPG2P98160 4391 aa0.15□□□□□ -2.39
HMGN2P39-201ENST00000398005 SPTBN4Q9H254 2564 aa0.14□□□□□ -2.39
HMGN2P39-201ENST00000398005 SETXQ7Z333 2677 aaKnown RBP0.14□□□□□ -2.39
HMGN2P39-201ENST00000398005 APC2O95996 2303 aa0.14□□□□□ -2.39
HMGN2P39-201ENST00000398005 SPRR2EP22531 72 aa0.14□□□□□ -2.39
HMGN2P39-201ENST00000398005 RPL39P62891 51 aaKnown RBP0.14□□□□□ -2.39
HMGN2P39-201ENST00000398005 NSD1Q96L73 2696 aaPredicted RBP0.14□□□□□ -2.39
HMGN2P39-201ENST00000398005 COL7A1Q02388 2944 aa0.14□□□□□ -2.39
HMGN2P39-201ENST00000398005 HECTD4Q9Y4D8 3996 aa0.13□□□□□ -2.39
HMGN2P39-201ENST00000398005 PKD1L2Q7Z442 2459 aa0.13□□□□□ -2.39
HMGN2P39-201ENST00000398005 CUBNO60494 3623 aa0.13□□□□□ -2.39
HMGN2P39-201ENST00000398005 TOMM7Q9P0U1 55 aa0.13□□□□□ -2.39
HMGN2P39-201ENST00000398005 WNK1Q9H4A3 2382 aa0.13□□□□□ -2.39
HMGN2P39-201ENST00000398005 FLNBO75369 2602 aaKnown RBP0.13□□□□□ -2.39
HMGN2P39-201ENST00000398005 CREBBPQ92793 2442 aa0.13□□□□□ -2.39
HMGN2P39-201ENST00000398005 A0A0C4DFX4 3053 aa0.12□□□□□ -2.39
HMGN2P39-201ENST00000398005 FSIP2Q5CZC0 6907 aa0.12□□□□□ -2.39
HMGN2P39-201ENST00000398005 MAST4O15021 2626 aa0.12□□□□□ -2.39
HMGN2P39-201ENST00000398005 MROH2BQ7Z745 1585 aa0.12□□□□□ -2.39
HMGN2P39-201ENST00000398005 CEP290O15078 2479 aa0.12□□□□□ -2.39
HMGN2P39-201ENST00000398005 NBASA2RRP1 2371 aa0.12□□□□□ -2.39
HMGN2P39-201ENST00000398005 PDZD2O15018 2839 aa0.12□□□□□ -2.39
HMGN2P39-201ENST00000398005 SVEP1Q4LDE5 3571 aa0.11□□□□□ -2.39
HMGN2P39-201ENST00000398005 SPRR2FQ96RM1 72 aa0.11□□□□□ -2.39
HMGN2P39-201ENST00000398005 HMCN2Q8NDA2 5059 aa0.11□□□□□ -2.39
HMGN2P39-201ENST00000398005 DMXL1Q9Y485 3027 aa0.11□□□□□ -2.39
HMGN2P39-201ENST00000398005 DUOX1Q9NRD9 1551 aa0.11□□□□□ -2.39
HMGN2P39-201ENST00000398005 STAB1Q9NY15 2570 aa0.1□□□□□ -2.39
HMGN2P39-201ENST00000398005 NF1P21359 2839 aa0.1□□□□□ -2.39
HMGN2P39-201ENST00000398005 ANKHD1Q8IWZ3 2542 aaKnown RBP0.1□□□□□ -2.39
HMGN2P39-201ENST00000398005 DCHS2Q6V1P9 2916 aa0.1□□□□□ -2.39
HMGN2P39-201ENST00000398005 RPL39LQ96EH5 51 aaKnown RBP0.1□□□□□ -2.39
HMGN2P39-201ENST00000398005 SONP18583 2426 aaKnown RBP0.1□□□□□ -2.39
HMGN2P39-201ENST00000398005 IGSF10Q6WRI0 2623 aa0.1□□□□□ -2.39
HMGN2P39-201ENST00000398005 COL6A3P12111 3177 aa0.1□□□□□ -2.39
HMGN2P39-201ENST00000398005 MAP1BP46821 2468 aaKnown RBP0.09□□□□□ -2.39
HMGN2P39-201ENST00000398005 LEAP2Q969E1 77 aa0.09□□□□□ -2.4
HMGN2P39-201ENST00000398005 NEBP20929 6669 aa0.09□□□□□ -2.4
HMGN2P39-201ENST00000398005 SRRM2Q9UQ35 2752 aaKnown RBP0.09□□□□□ -2.4
HMGN2P39-201ENST00000398005 SETD2Q9BYW2 2564 aaPredicted RBP0.08□□□□□ -2.4
HMGN2P39-201ENST00000398005 GCC2Q8IWJ2 1684 aa0.08□□□□□ -2.4
HMGN2P39-201ENST00000398005 GCN1Q92616 2671 aaKnown RBP0.08□□□□□ -2.4
HMGN2P39-201ENST00000398005 KRTAP8-1Q8IUC2 63 aa0.08□□□□□ -2.4
HMGN2P39-201ENST00000398005 PKD1P98161 4303 aa0.08□□□□□ -2.4
HMGN2P39-201ENST00000398005 TRIOO75962 3097 aa0.08□□□□□ -2.4
HMGN2P39-201ENST00000398005 PKHD1L1Q86WI1 4243 aa0.08□□□□□ -2.4
HMGN2P39-201ENST00000398005 ZZEF1O43149 2961 aa0.07□□□□□ -2.4
HMGN2P39-201ENST00000398005 SPENQ96T58 3664 aaKnown RBP0.07□□□□□ -2.4
HMGN2P39-201ENST00000398005 FLGP20930 4061 aaPredicted RBP0.07□□□□□ -2.4
HMGN2P39-201ENST00000398005 SACSQ9NZJ4 4579 aa0.07□□□□□ -2.4
HMGN2P39-201ENST00000398005 DNAH3Q8TD57 4116 aa0.07□□□□□ -2.4
HMGN2P39-201ENST00000398005 SSPOA2VEC9 5147 aa0.07□□□□□ -2.4
HMGN2P39-201ENST00000398005 FLNCQ14315 2725 aa0.07□□□□□ -2.4
HMGN2P39-201ENST00000398005 ZANQ9Y493 2812 aa0.06□□□□□ -2.4
HMGN2P39-201ENST00000398005 PKHD1P08F94 4074 aa0.06□□□□□ -2.4
HMGN2P39-201ENST00000398005 MTORP42345 2549 aa0.06□□□□□ -2.4
HMGN2P39-201ENST00000398005 SMR3BP02814 79 aaPredicted RBP0.06□□□□□ -2.4
HMGN2P39-201ENST00000398005 DEFB1P60022 68 aa0.06□□□□□ -2.4
HMGN2P39-201ENST00000398005 COL6A5A8TX70 2615 aa0.06□□□□□ -2.4
HMGN2P39-201ENST00000398005 TACC2O95359 2948 aa0.06□□□□□ -2.4
HMGN2P39-201ENST00000398005 LRP1BQ9NZR2 4599 aa0.05□□□□□ -2.4
HMGN2P39-201ENST00000398005 DMBT1Q9UGM3 2413 aaPredicted RBP0.05□□□□□ -2.4
HMGN2P39-201ENST00000398005 KRTAP19-5Q3LI72 72 aa0.05□□□□□ -2.4
HMGN2P39-201ENST00000398005 HTTP42858 3142 aa0.05□□□□□ -2.4
HMGN2P39-201ENST00000398005 AKAP9Q99996 3911 aa0.05□□□□□ -2.4
HMGN2P39-201ENST00000398005 RANBP2P49792 3224 aaKnown RBP0.05□□□□□ -2.4
HMGN2P39-201ENST00000398005 ANK3Q12955 4377 aaKnown RBP0.05□□□□□ -2.4
HMGN2P39-201ENST00000398005 LAMA5O15230 3695 aa0.04□□□□□ -2.4
HMGN2P39-201ENST00000398005 KALRNO60229 2985 aa0.04□□□□□ -2.4
HMGN2P39-201ENST00000398005 LRP2P98164 4655 aa0.04□□□□□ -2.4
HMGN2P39-201ENST00000398005 ANKRD11Q6UB99 2663 aaPredicted RBP0.04□□□□□ -2.4
HMGN2P39-201ENST00000398005 KRTAP19-7Q3SYF9 63 aa0.03□□□□□ -2.4
HMGN2P39-201ENST00000398005 LINC01590Q5TEZ4 76 aa0.03□□□□□ -2.4
HMGN2P39-201ENST00000398005 ACACBO00763 2458 aa0.02□□□□□ -2.41
HMGN2P39-201ENST00000398005 TGP01266 2768 aa0.01□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 339.6 ms