RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 DNHD1Q96M86 4753 aa9.64□□□□□ -0.87
CHMP1A-201ENST00000397901 NUPR2A6NF83 97 aa9.64□□□□□ -0.87
CHMP1A-201ENST00000397901 Q96NJ1 140 aa9.62□□□□□ -0.87
CHMP1A-201ENST00000397901 NBDYA0A0U1RRE5 68 aa9.62□□□□□ -0.87
CHMP1A-201ENST00000397901 H3BS24 57 aa9.61□□□□□ -0.87
CHMP1A-201ENST00000397901 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.61□□□□□ -0.87
CHMP1A-201ENST00000397901 ADM2Q7Z4H4 148 aa9.6□□□□□ -0.87
CHMP1A-201ENST00000397901 MEGF8Q7Z7M0 2845 aa9.59□□□□□ -0.87
CHMP1A-201ENST00000397901 Q6ZRN7 208 aaPredicted RBP9.59□□□□□ -0.87
CHMP1A-201ENST00000397901 A0A087X002 238 aa9.58□□□□□ -0.88
CHMP1A-201ENST00000397901 C8orf17Q9NRJ1 99 aa9.58□□□□□ -0.88
CHMP1A-201ENST00000397901 PRR26Q8N8Z3 221 aa9.57□□□□□ -0.88
CHMP1A-201ENST00000397901 IGHV6-1A0A0B4J1U7 121 aa9.57□□□□□ -0.88
CHMP1A-201ENST00000397901 HECTD4Q9Y4D8 3996 aa9.56□□□□□ -0.88
CHMP1A-201ENST00000397901 SPACA4Q8TDM5 124 aa9.56□□□□□ -0.88
CHMP1A-201ENST00000397901 ANAPC11Q9NYG5 84 aa9.55□□□□□ -0.88
CHMP1A-201ENST00000397901 RTL8CO15255 209 aa9.53□□□□□ -0.88
CHMP1A-201ENST00000397901 LINC00483Q53H64 154 aa9.51□□□□□ -0.89
CHMP1A-201ENST00000397901 DNAH2Q9P225 4427 aa9.51□□□□□ -0.89
CHMP1A-201ENST00000397901 KMT2AQ03164 3969 aa9.51□□□□□ -0.89
CHMP1A-201ENST00000397901 A0A1B0GVX0 72 aa9.51□□□□□ -0.89
CHMP1A-201ENST00000397901 FRAS1Q86XX4 4008 aa9.51□□□□□ -0.89
CHMP1A-201ENST00000397901 MRPL34Q9BQ48 92 aaKnown RBP9.5□□□□□ -0.89
CHMP1A-201ENST00000397901 CDK2AP2O75956 126 aa9.49□□□□□ -0.89
CHMP1A-201ENST00000397901 WWC2-AS2Q96NR7 200 aa9.49□□□□□ -0.89
CHMP1A-201ENST00000397901 ACYP2P14621 99 aa9.49□□□□□ -0.89
CHMP1A-201ENST00000397901 SPATA8Q6RVD6 105 aa9.49□□□□□ -0.89
CHMP1A-201ENST00000397901 PSORS1C2Q9UIG4 136 aa9.49□□□□□ -0.89
CHMP1A-201ENST00000397901 DNAH8Q96JB1 4490 aa9.48□□□□□ -0.89
CHMP1A-201ENST00000397901 NOTCH2NLQ7Z3S9 236 aa9.48□□□□□ -0.89
CHMP1A-201ENST00000397901 ZNF706Q9Y5V0 76 aaPredicted RBP9.47□□□□□ -0.89
CHMP1A-201ENST00000397901 A0A087WTM6 91 aa9.45□□□□□ -0.9
CHMP1A-201ENST00000397901 DNAH17Q9UFH2 4485 aa9.45□□□□□ -0.9
CHMP1A-201ENST00000397901 IGLV5-52A0A0A0MRZ9 124 aa9.44□□□□□ -0.9
CHMP1A-201ENST00000397901 A0A1B0GU69 56 aa9.44□□□□□ -0.9
CHMP1A-201ENST00000397901 SPINK6Q6UWN8 80 aa9.43□□□□□ -0.9
CHMP1A-201ENST00000397901 ALMS1Q8TCU4 4167 aa9.42□□□□□ -0.9
CHMP1A-201ENST00000397901 ZNF861PO60384 105 aa9.41□□□□□ -0.9
CHMP1A-201ENST00000397901 MIR22HGQ0VDD5 57 aa9.39□□□□□ -0.91
CHMP1A-201ENST00000397901 KRTAP21-3Q3LHN1 58 aa9.38□□□□□ -0.91
CHMP1A-201ENST00000397901 DNAH6Q9C0G6 4158 aa9.38□□□□□ -0.91
CHMP1A-201ENST00000397901 RETNLBQ9BQ08 111 aa9.37□□□□□ -0.91
CHMP1A-201ENST00000397901 UQCR11O14957 56 aa9.37□□□□□ -0.91
CHMP1A-201ENST00000397901 DMAC1Q96GE9 116 aa9.37□□□□□ -0.91
CHMP1A-201ENST00000397901 FBN3Q75N90 2809 aa9.37□□□□□ -0.91
CHMP1A-201ENST00000397901 KRTAP13-3Q3SY46 172 aa9.36□□□□□ -0.91
CHMP1A-201ENST00000397901 CSAG1Q6PB30 78 aa9.36□□□□□ -0.91
CHMP1A-201ENST00000397901 Q5W150 140 aa9.35□□□□□ -0.91
CHMP1A-201ENST00000397901 TGP01266 2768 aa9.34□□□□□ -0.91
CHMP1A-201ENST00000397901 CIRBP-AS1Q8TBR5 109 aa9.34□□□□□ -0.91
CHMP1A-201ENST00000397901 C1orf134Q5TEV5 83 aa9.29□□□□□ -0.92
CHMP1A-201ENST00000397901 IGLV7-43P04211 117 aa9.28□□□□□ -0.92
CHMP1A-201ENST00000397901 DNAH11Q96DT5 4516 aa9.26□□□□□ -0.93
CHMP1A-201ENST00000397901 DNAH5Q8TE73 4624 aa9.25□□□□□ -0.93
CHMP1A-201ENST00000397901 LY6G6CO95867 125 aa9.24□□□□□ -0.93
CHMP1A-201ENST00000397901 PKD1P98161 4303 aa9.17□□□□□ -0.94
CHMP1A-201ENST00000397901 SSBP3-AS1Q7Z2R9 100 aa9.16□□□□□ -0.94
CHMP1A-201ENST00000397901 FAT2Q9NYQ8 4349 aa9.15□□□□□ -0.94
CHMP1A-201ENST00000397901 HYDINQ4G0P3 5121 aa9.14□□□□□ -0.95
CHMP1A-201ENST00000397901 FAM229AH3BQW9 127 aa9.13□□□□□ -0.95
CHMP1A-201ENST00000397901 KRTAP10-2P60368 255 aa9.13□□□□□ -0.95
CHMP1A-201ENST00000397901 IGKV2-30P06310 120 aa9.12□□□□□ -0.95
CHMP1A-201ENST00000397901 KRTAP13-2Q52LG2 175 aa9.09□□□□□ -0.95
CHMP1A-201ENST00000397901 KRTAP25-1Q3LHN0 102 aa9.05□□□□□ -0.96
CHMP1A-201ENST00000397901 LRP1BQ9NZR2 4599 aa9.04□□□□□ -0.96
CHMP1A-201ENST00000397901 ROMO1P60602 79 aa9.04□□□□□ -0.96
CHMP1A-201ENST00000397901 Q6ZSA8 131 aa9.03□□□□□ -0.96
CHMP1A-201ENST00000397901 IGKV2D-30A0A075B6S6 120 aa9.02□□□□□ -0.97
CHMP1A-201ENST00000397901 KRTAP16-1A8MUX0 517 aa9.02□□□□□ -0.97
CHMP1A-201ENST00000397901 KRTAP10-1P60331 282 aa9.01□□□□□ -0.97
CHMP1A-201ENST00000397901 A8MUU9 505 aa8.98□□□□□ -0.97
CHMP1A-201ENST00000397901 SACSQ9NZJ4 4579 aa8.97□□□□□ -0.97
CHMP1A-201ENST00000397901 VPS13BQ7Z7G8 4022 aa8.95□□□□□ -0.98
CHMP1A-201ENST00000397901 KRTAP1-4P0C5Y4 121 aa8.94□□□□□ -0.98
CHMP1A-201ENST00000397901 LINC00304Q8N9R0 145 aa8.91□□□□□ -0.98
CHMP1A-201ENST00000397901 PKHD1P08F94 4074 aa8.89□□□□□ -0.99
CHMP1A-201ENST00000397901 H0YAA0 97 aa8.88□□□□□ -0.99
CHMP1A-201ENST00000397901 SPINK1P00995 79 aa8.87□□□□□ -0.99
CHMP1A-201ENST00000397901 TYMSOSQ8TAI1 123 aa8.85□□□□□ -0.99
CHMP1A-201ENST00000397901 Q8N1X5 172 aa8.82□□□□□ -1
CHMP1A-201ENST00000397901 DYNC1H1Q14204 4646 aaKnown RBP8.79□□□□□ -1
CHMP1A-201ENST00000397901 P0C880 135 aa8.76□□□□□ -1.01
CHMP1A-201ENST00000397901 A0A1B0GU33 70 aa8.75□□□□□ -1.01
CHMP1A-201ENST00000397901 H1FX-AS1Q4G0G2 97 aa8.7□□□□□ -1.02
CHMP1A-201ENST00000397901 APOBP04114 4563 aaKnown RBP8.7□□□□□ -1.02
CHMP1A-201ENST00000397901 A0A1B0GVY2 172 aa8.69□□□□□ -1.02
CHMP1A-201ENST00000397901 K7ERS5 55 aa8.68□□□□□ -1.02
CHMP1A-201ENST00000397901 RYR2Q92736 4967 aa8.68□□□□□ -1.02
CHMP1A-201ENST00000397901 C9orf92A6NGG3 77 aa8.66□□□□□ -1.02
CHMP1A-201ENST00000397901 CRIPTQ9P021 101 aa8.66□□□□□ -1.02
CHMP1A-201ENST00000397901 FAT1Q14517 4588 aa8.63□□□□□ -1.03
CHMP1A-201ENST00000397901 KMT2CQ8NEZ4 4911 aaKnown RBP8.62□□□□□ -1.03
CHMP1A-201ENST00000397901 SMR3BP02814 79 aaPredicted RBP8.62□□□□□ -1.03
CHMP1A-201ENST00000397901 PKHD1L1Q86WI1 4243 aa8.59□□□□□ -1.03
CHMP1A-201ENST00000397901 RPS29P62273 56 aaKnown RBP8.59□□□□□ -1.03
CHMP1A-201ENST00000397901 KRTAP10-4P60372 401 aaPredicted RBP8.58□□□□□ -1.04
CHMP1A-201ENST00000397901 FLG2Q5D862 2391 aaPredicted RBP8.56□□□□□ -1.04
CHMP1A-201ENST00000397901 KRTAP3-1Q9BYR8 98 aa8.55□□□□□ -1.04
CHMP1A-201ENST00000397901 C20orf166-AS1Q96NR2 134 aa8.54□□□□□ -1.04
CHMP1A-201ENST00000397901 SPINT4Q6UDR6 99 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms