RNA–Protein interactions for RNA: ENST00000397661.6

NFIX-203, Transcript of nuclear factor I X, humanhuman

TSL 5 BASIC

Gene NFIX, Length 3,143 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-203ENST00000397661 DNAH2Q9P225 4427 aa13.07□□□□□ -0.32
NFIX-203ENST00000397661 IGLV5-52A0A0A0MRZ9 124 aa13.07□□□□□ -0.32
NFIX-203ENST00000397661 LY6G6CO95867 125 aa13.06□□□□□ -0.32
NFIX-203ENST00000397661 WWC2-AS2Q96NR7 200 aa13.06□□□□□ -0.32
NFIX-203ENST00000397661 C8orf17Q9NRJ1 99 aa13.06□□□□□ -0.32
NFIX-203ENST00000397661 DYNC2H1Q8NCM8 4307 aaKnown RBP13.05□□□□□ -0.32
NFIX-203ENST00000397661 IGLV7-46A0A075B6I9 117 aa13.04□□□□□ -0.32
NFIX-203ENST00000397661 VPS13DQ5THJ4 4388 aa13.03□□□□□ -0.32
NFIX-203ENST00000397661 DNAH17Q9UFH2 4485 aa13.02□□□□□ -0.33
NFIX-203ENST00000397661 ZNF861PO60384 105 aa13□□□□□ -0.33
NFIX-203ENST00000397661 DNHD1Q96M86 4753 aa12.98□□□□□ -0.33
NFIX-203ENST00000397661 A0A1B0GVX0 72 aa12.97□□□□□ -0.33
NFIX-203ENST00000397661 DNAH6Q9C0G6 4158 aa12.96□□□□□ -0.34
NFIX-203ENST00000397661 ZNF706Q9Y5V0 76 aaPredicted RBP12.96□□□□□ -0.34
NFIX-203ENST00000397661 Q75L30 129 aa12.95□□□□□ -0.34
NFIX-203ENST00000397661 C1orf134Q5TEV5 83 aa12.94□□□□□ -0.34
NFIX-203ENST00000397661 LINC00483Q53H64 154 aa12.93□□□□□ -0.34
NFIX-203ENST00000397661 LOC101927531A0A1B0GV80 90 aa12.93□□□□□ -0.34
NFIX-203ENST00000397661 HRES1P13985 223 aa12.9□□□□□ -0.34
NFIX-203ENST00000397661 MRPL34Q9BQ48 92 aaKnown RBP12.9□□□□□ -0.34
NFIX-203ENST00000397661 PLAC8Q9NZF1 115 aa12.9□□□□□ -0.34
NFIX-203ENST00000397661 SPINK7P58062 85 aa12.9□□□□□ -0.34
NFIX-203ENST00000397661 PRR26Q8N8Z3 221 aa12.88□□□□□ -0.35
NFIX-203ENST00000397661 DNAH11Q96DT5 4516 aa12.88□□□□□ -0.35
NFIX-203ENST00000397661 TP53AIP1Q9HCN2 124 aa12.88□□□□□ -0.35
NFIX-203ENST00000397661 ATP11AUNQ6ZP68 121 aa12.87□□□□□ -0.35
NFIX-203ENST00000397661 Q6ZR54 194 aa12.87□□□□□ -0.35
NFIX-203ENST00000397661 KTN1-AS1Q86SY8 53 aa12.86□□□□□ -0.35
NFIX-203ENST00000397661 IGLV7-43P04211 117 aa12.86□□□□□ -0.35
NFIX-203ENST00000397661 KRTAP10-2P60368 255 aa12.86□□□□□ -0.35
NFIX-203ENST00000397661 Q5W150 140 aa12.85□□□□□ -0.35
NFIX-203ENST00000397661 CDC42SE1Q9NRR8 79 aa12.82□□□□□ -0.36
NFIX-203ENST00000397661 LINC01558Q9Y6Z2 57 aa12.81□□□□□ -0.36
NFIX-203ENST00000397661 ASB16-AS1Q495Z4 193 aa12.8□□□□□ -0.36
NFIX-203ENST00000397661 RBM12B-AS1Q9P1G2 102 aa12.8□□□□□ -0.36
NFIX-203ENST00000397661 A6NN06 94 aa12.77□□□□□ -0.36
NFIX-203ENST00000397661 LRP1BQ9NZR2 4599 aa12.71□□□□□ -0.38
NFIX-203ENST00000397661 ALMS1Q8TCU4 4167 aa12.69□□□□□ -0.38
NFIX-203ENST00000397661 DNAH5Q8TE73 4624 aa12.67□□□□□ -0.38
NFIX-203ENST00000397661 HYDINQ4G0P3 5121 aa12.64□□□□□ -0.39
NFIX-203ENST00000397661 KRTAP10-1P60331 282 aa12.64□□□□□ -0.39
NFIX-203ENST00000397661 LINC00313P59037 77 aa12.62□□□□□ -0.39
NFIX-203ENST00000397661 KRTAP13-2Q52LG2 175 aa12.61□□□□□ -0.39
NFIX-203ENST00000397661 C7orf65Q6ZTY9 151 aa12.6□□□□□ -0.39
NFIX-203ENST00000397661 PRAC1Q96KF2 57 aa12.57□□□□□ -0.4
NFIX-203ENST00000397661 SSBP3-AS1Q7Z2R9 100 aa12.56□□□□□ -0.4
NFIX-203ENST00000397661 SPINK1P00995 79 aa12.54□□□□□ -0.4
NFIX-203ENST00000397661 ACYP2P14621 99 aa12.54□□□□□ -0.4
NFIX-203ENST00000397661 IGKV2D-30A0A075B6S6 120 aa12.53□□□□□ -0.4
NFIX-203ENST00000397661 IGKV2-30P06310 120 aa12.53□□□□□ -0.4
NFIX-203ENST00000397661 ADM2Q7Z4H4 148 aa12.51□□□□□ -0.41
NFIX-203ENST00000397661 VPS13BQ7Z7G8 4022 aa12.5□□□□□ -0.41
NFIX-203ENST00000397661 KRTAP13-3Q3SY46 172 aa12.49□□□□□ -0.41
NFIX-203ENST00000397661 PLA2G1BP04054 148 aaKnown RBP12.46□□□□□ -0.41
NFIX-203ENST00000397661 FLG2Q5D862 2391 aaPredicted RBP12.46□□□□□ -0.41
NFIX-203ENST00000397661 A0A1B0GU69 56 aa12.44□□□□□ -0.42
NFIX-203ENST00000397661 FAT2Q9NYQ8 4349 aa12.43□□□□□ -0.42
NFIX-203ENST00000397661 C8orf87E5RJ46 101 aa12.43□□□□□ -0.42
NFIX-203ENST00000397661 C4orf48Q5BLP8 95 aa12.42□□□□□ -0.42
NFIX-203ENST00000397661 SMR3BP02814 79 aaPredicted RBP12.41□□□□□ -0.42
NFIX-203ENST00000397661 FAM229AH3BQW9 127 aa12.4□□□□□ -0.43
NFIX-203ENST00000397661 DMBT1Q9UGM3 2413 aaPredicted RBP12.39□□□□□ -0.43
NFIX-203ENST00000397661 PKHD1P08F94 4074 aa12.38□□□□□ -0.43
NFIX-203ENST00000397661 TYMSOSQ8TAI1 123 aa12.37□□□□□ -0.43
NFIX-203ENST00000397661 DMAC1Q96GE9 116 aa12.37□□□□□ -0.43
NFIX-203ENST00000397661 KRTAP1-4P0C5Y4 121 aa12.37□□□□□ -0.43
NFIX-203ENST00000397661 PKD1P98161 4303 aa12.37□□□□□ -0.43
NFIX-203ENST00000397661 Q6ZSA8 131 aa12.31□□□□□ -0.44
NFIX-203ENST00000397661 Q8N1X5 172 aa12.3□□□□□ -0.44
NFIX-203ENST00000397661 KRTAP16-1A8MUX0 517 aa12.28□□□□□ -0.44
NFIX-203ENST00000397661 MIR22HGQ0VDD5 57 aa12.25□□□□□ -0.45
NFIX-203ENST00000397661 FAT1Q14517 4588 aa12.23□□□□□ -0.45
NFIX-203ENST00000397661 C9orf92A6NGG3 77 aa12.23□□□□□ -0.45
NFIX-203ENST00000397661 UQCR11O14957 56 aa12.19□□□□□ -0.46
NFIX-203ENST00000397661 SPATA8Q6RVD6 105 aa12.18□□□□□ -0.46
NFIX-203ENST00000397661 LINC00304Q8N9R0 145 aa12.13□□□□□ -0.47
NFIX-203ENST00000397661 LINC01554Q52M75 96 aa12.05□□□□□ -0.48
NFIX-203ENST00000397661 CSAG1Q6PB30 78 aa12.04□□□□□ -0.48
NFIX-203ENST00000397661 DYNC1H1Q14204 4646 aaKnown RBP12.04□□□□□ -0.48
NFIX-203ENST00000397661 SACSQ9NZJ4 4579 aa12.02□□□□□ -0.49
NFIX-203ENST00000397661 CRIPTQ9P021 101 aa11.99□□□□□ -0.49
NFIX-203ENST00000397661 LRP1Q07954 4544 aaKnown RBP11.78□□□□□ -0.52
NFIX-203ENST00000397661 H0YAA0 97 aa11.76□□□□□ -0.53
NFIX-203ENST00000397661 APOBP04114 4563 aaKnown RBP11.75□□□□□ -0.53
NFIX-203ENST00000397661 KMT2CQ8NEZ4 4911 aaKnown RBP11.75□□□□□ -0.53
NFIX-203ENST00000397661 MYCBP2O75592 4640 aa11.74□□□□□ -0.53
NFIX-203ENST00000397661 KRTAP3-1Q9BYR8 98 aa11.72□□□□□ -0.53
NFIX-203ENST00000397661 A8MUU9 505 aa11.66□□□□□ -0.54
NFIX-203ENST00000397661 C20orf166-AS1Q96NR2 134 aa11.65□□□□□ -0.54
NFIX-203ENST00000397661 A0A1B0GU33 70 aa11.64□□□□□ -0.55
NFIX-203ENST00000397661 KRTAP10-4P60372 401 aaPredicted RBP11.64□□□□□ -0.55
NFIX-203ENST00000397661 H3BS24 57 aa11.64□□□□□ -0.55
NFIX-203ENST00000397661 A0A1B0GVY2 172 aa11.62□□□□□ -0.55
NFIX-203ENST00000397661 RPS29P62273 56 aaKnown RBP11.62□□□□□ -0.55
NFIX-203ENST00000397661 PKHD1L1Q86WI1 4243 aa11.57□□□□□ -0.56
NFIX-203ENST00000397661 A0A0D9SG42 100 aa11.55□□□□□ -0.56
NFIX-203ENST00000397661 RYR2Q92736 4967 aa11.54□□□□□ -0.56
NFIX-203ENST00000397661 H1FX-AS1Q4G0G2 97 aa11.52□□□□□ -0.57
NFIX-203ENST00000397661 HSPG2P98160 4391 aa11.5□□□□□ -0.57
NFIX-203ENST00000397661 KRTAP25-1Q3LHN0 102 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms