RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 C4orf26Q17RF5 130 aa3.53□□□□□ -1.84
PTPRD-206ENST00000397617 ST20-AS1Q8NBB2 130 aa3.53□□□□□ -1.84
PTPRD-206ENST00000397617 CRIPTQ9P021 101 aa3.53□□□□□ -1.84
PTPRD-206ENST00000397617 COX6B2Q6YFQ2 88 aa3.53□□□□□ -1.84
PTPRD-206ENST00000397617 PCOTHQ58A44 107 aa3.53□□□□□ -1.84
PTPRD-206ENST00000397617 A0A087WVE0 104 aa3.52□□□□□ -1.85
PTPRD-206ENST00000397617 A0A1B0GVX0 72 aa3.52□□□□□ -1.85
PTPRD-206ENST00000397617 Q75L30 129 aa3.51□□□□□ -1.85
PTPRD-206ENST00000397617 PSPHP1O15172 72 aa3.51□□□□□ -1.85
PTPRD-206ENST00000397617 A8MUN3 132 aa3.5□□□□□ -1.85
PTPRD-206ENST00000397617 DMAC1Q96GE9 116 aa3.5□□□□□ -1.85
PTPRD-206ENST00000397617 RBM12B-AS1Q9P1G2 102 aa3.5□□□□□ -1.85
PTPRD-206ENST00000397617 Q8N9P0 234 aaPredicted RBP3.49□□□□□ -1.85
PTPRD-206ENST00000397617 MMP24-AS1A0A0U1RRL7 71 aa3.49□□□□□ -1.85
PTPRD-206ENST00000397617 K7EQZ3 153 aa3.49□□□□□ -1.85
PTPRD-206ENST00000397617 C8orf17Q9NRJ1 99 aa3.48□□□□□ -1.85
PTPRD-206ENST00000397617 PANO1I0J062 215 aa3.48□□□□□ -1.85
PTPRD-206ENST00000397617 MRPL34Q9BQ48 92 aaKnown RBP3.48□□□□□ -1.85
PTPRD-206ENST00000397617 LINC00304Q8N9R0 145 aa3.47□□□□□ -1.85
PTPRD-206ENST00000397617 KRTAP11-1Q8IUC1 163 aa3.46□□□□□ -1.85
PTPRD-206ENST00000397617 FP248Q71RG6 208 aaPredicted RBP3.46□□□□□ -1.86
PTPRD-206ENST00000397617 LUZP6Q538Z0 58 aa3.46□□□□□ -1.86
PTPRD-206ENST00000397617 PRR26Q8N8Z3 221 aa3.45□□□□□ -1.86
PTPRD-206ENST00000397617 KRTAP1-4P0C5Y4 121 aa3.45□□□□□ -1.86
PTPRD-206ENST00000397617 Q96NJ1 140 aa3.45□□□□□ -1.86
PTPRD-206ENST00000397617 SPINT4Q6UDR6 99 aa3.44□□□□□ -1.86
PTPRD-206ENST00000397617 IGLV7-46A0A075B6I9 117 aa3.44□□□□□ -1.86
PTPRD-206ENST00000397617 DNAH9Q9NYC9 4486 aa3.44□□□□□ -1.86
PTPRD-206ENST00000397617 MIR22HGQ0VDD5 57 aa3.44□□□□□ -1.86
PTPRD-206ENST00000397617 KRTAP10-1P60331 282 aa3.43□□□□□ -1.86
PTPRD-206ENST00000397617 COA5Q86WW8 74 aa3.43□□□□□ -1.86
PTPRD-206ENST00000397617 VPS13DQ5THJ4 4388 aa3.43□□□□□ -1.86
PTPRD-206ENST00000397617 A0A1B0GVY2 172 aa3.42□□□□□ -1.86
PTPRD-206ENST00000397617 CAMK2N1Q7Z7J9 78 aa3.42□□□□□ -1.86
PTPRD-206ENST00000397617 KRTAP10-2P60368 255 aa3.42□□□□□ -1.86
PTPRD-206ENST00000397617 A0A0A0MQY5 61 aa3.41□□□□□ -1.86
PTPRD-206ENST00000397617 LINC01554Q52M75 96 aa3.41□□□□□ -1.86
PTPRD-206ENST00000397617 CSMD3Q7Z407 3707 aa3.41□□□□□ -1.86
PTPRD-206ENST00000397617 PRKDCP78527 4128 aaKnown RBP3.41□□□□□ -1.86
PTPRD-206ENST00000397617 DEFB116Q30KQ4 102 aa3.41□□□□□ -1.86
PTPRD-206ENST00000397617 DNHD1Q96M86 4753 aa3.41□□□□□ -1.86
PTPRD-206ENST00000397617 PLECQ15149 4684 aaKnown RBP3.4□□□□□ -1.86
PTPRD-206ENST00000397617 KRTAP13-3Q3SY46 172 aa3.4□□□□□ -1.86
PTPRD-206ENST00000397617 DYNC2H1Q8NCM8 4307 aaKnown RBP3.4□□□□□ -1.87
PTPRD-206ENST00000397617 DNAH1Q9P2D7 4330 aa3.4□□□□□ -1.87
PTPRD-206ENST00000397617 KRTAP13-2Q52LG2 175 aa3.39□□□□□ -1.87
PTPRD-206ENST00000397617 HUWE1Q7Z6Z7 4374 aaKnown RBP3.38□□□□□ -1.87
PTPRD-206ENST00000397617 LINC01558Q9Y6Z2 57 aa3.38□□□□□ -1.87
PTPRD-206ENST00000397617 HRES1P13985 223 aa3.38□□□□□ -1.87
PTPRD-206ENST00000397617 NOTCH2NLQ7Z3S9 236 aa3.37□□□□□ -1.87
PTPRD-206ENST00000397617 A8MUU9 505 aa3.37□□□□□ -1.87
PTPRD-206ENST00000397617 KRTAP10-4P60372 401 aaPredicted RBP3.37□□□□□ -1.87
PTPRD-206ENST00000397617 C20orf166-AS1Q96NR2 134 aa3.37□□□□□ -1.87
PTPRD-206ENST00000397617 SEC61BP60468 96 aaKnown RBP3.36□□□□□ -1.87
PTPRD-206ENST00000397617 DNAH7Q8WXX0 4024 aa3.35□□□□□ -1.87
PTPRD-206ENST00000397617 OXTP01178 125 aa3.34□□□□□ -1.87
PTPRD-206ENST00000397617 DNAH6Q9C0G6 4158 aa3.34□□□□□ -1.87
PTPRD-206ENST00000397617 DNAH17Q9UFH2 4485 aa3.33□□□□□ -1.88
PTPRD-206ENST00000397617 DNAH10Q8IVF4 4471 aa3.33□□□□□ -1.88
PTPRD-206ENST00000397617 KRTAP16-1A8MUX0 517 aa3.33□□□□□ -1.88
PTPRD-206ENST00000397617 CSAG1Q6PB30 78 aa3.33□□□□□ -1.88
PTPRD-206ENST00000397617 KRTAP10-8P60410 259 aa3.32□□□□□ -1.88
PTPRD-206ENST00000397617 STARD9Q9P2P6 4700 aa3.32□□□□□ -1.88
PTPRD-206ENST00000397617 CYSTM1Q9H1C7 97 aa3.32□□□□□ -1.88
PTPRD-206ENST00000397617 H3BS24 57 aa3.31□□□□□ -1.88
PTPRD-206ENST00000397617 ALMS1Q8TCU4 4167 aa3.3□□□□□ -1.88
PTPRD-206ENST00000397617 DNAH2Q9P225 4427 aa3.3□□□□□ -1.88
PTPRD-206ENST00000397617 Q5W150 140 aa3.28□□□□□ -1.88
PTPRD-206ENST00000397617 DNAH11Q96DT5 4516 aa3.28□□□□□ -1.88
PTPRD-206ENST00000397617 CMYA5Q8N3K9 4069 aa3.28□□□□□ -1.89
PTPRD-206ENST00000397617 Q8N1X5 172 aa3.28□□□□□ -1.89
PTPRD-206ENST00000397617 M0R2T5 61 aa3.27□□□□□ -1.89
PTPRD-206ENST00000397617 A0A1B0GU33 70 aa3.27□□□□□ -1.89
PTPRD-206ENST00000397617 RYR1P21817 5038 aa3.26□□□□□ -1.89
PTPRD-206ENST00000397617 HECTD4Q9Y4D8 3996 aa3.25□□□□□ -1.89
PTPRD-206ENST00000397617 A0A0G2JQZ4 141 aa3.25□□□□□ -1.89
PTPRD-206ENST00000397617 Q5VV11 94 aa3.25□□□□□ -1.89
PTPRD-206ENST00000397617 TPRXLQ17RH7 258 aa3.25□□□□□ -1.89
PTPRD-206ENST00000397617 ANAPC11Q9NYG5 84 aa3.24□□□□□ -1.89
PTPRD-206ENST00000397617 C9orf92A6NGG3 77 aa3.23□□□□□ -1.89
PTPRD-206ENST00000397617 KIAA1109Q2LD37 5005 aa3.22□□□□□ -1.89
PTPRD-206ENST00000397617 R4GN34 69 aa3.22□□□□□ -1.89
PTPRD-206ENST00000397617 DNAH5Q8TE73 4624 aa3.22□□□□□ -1.89
PTPRD-206ENST00000397617 Q5VSD8 79 aa3.21□□□□□ -1.9
PTPRD-206ENST00000397617 XP32Q5T750 250 aa3.2□□□□□ -1.9
PTPRD-206ENST00000397617 SPATA8Q6RVD6 105 aa3.2□□□□□ -1.9
PTPRD-206ENST00000397617 RPL37P61927 97 aaKnown RBP3.19□□□□□ -1.9
PTPRD-206ENST00000397617 A0A0D9SG42 100 aa3.19□□□□□ -1.9
PTPRD-206ENST00000397617 LYSTQ99698 3801 aa3.19□□□□□ -1.9
PTPRD-206ENST00000397617 SMR3BP02814 79 aaPredicted RBP3.19□□□□□ -1.9
PTPRD-206ENST00000397617 PLAC4Q8WY50 150 aa3.19□□□□□ -1.9
PTPRD-206ENST00000397617 RYR2Q92736 4967 aa3.19□□□□□ -1.9
PTPRD-206ENST00000397617 ROMO1P60602 79 aa3.19□□□□□ -1.9
PTPRD-206ENST00000397617 S4R3F8 94 aa3.18□□□□□ -1.9
PTPRD-206ENST00000397617 A6NN06 94 aa3.18□□□□□ -1.9
PTPRD-206ENST00000397617 DYNC1H1Q14204 4646 aaKnown RBP3.17□□□□□ -1.9
PTPRD-206ENST00000397617 SPINK7P58062 85 aa3.16□□□□□ -1.9
PTPRD-206ENST00000397617 MT1HL1P0DM35 61 aa3.15□□□□□ -1.9
PTPRD-206ENST00000397617 LRP1BQ9NZR2 4599 aa3.14□□□□□ -1.91
PTPRD-206ENST00000397617 H0YAA0 97 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 168.2 ms