RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 FP248Q71RG6 208 aaPredicted RBP10.77□□□□□ -0.69
TSPAN4-204ENST00000397404 HCG22E2RYF7 251 aa10.75□□□□□ -0.69
TSPAN4-204ENST00000397404 Q8N9L7 120 aa10.75□□□□□ -0.69
TSPAN4-204ENST00000397404 A0A087WVE0 104 aa10.73□□□□□ -0.69
TSPAN4-204ENST00000397404 DMBT1Q9UGM3 2413 aaPredicted RBP10.72□□□□□ -0.69
TSPAN4-204ENST00000397404 IGHV6-1A0A0B4J1U7 121 aa10.72□□□□□ -0.69
TSPAN4-204ENST00000397404 FAM236AA0A1B0GUQ0 79 aa10.72□□□□□ -0.69
TSPAN4-204ENST00000397404 FAM236BA0A1B0GV22 79 aa10.72□□□□□ -0.69
TSPAN4-204ENST00000397404 J3QL48 77 aa10.7□□□□□ -0.7
TSPAN4-204ENST00000397404 ATOX1O00244 68 aa10.7□□□□□ -0.7
TSPAN4-204ENST00000397404 SMIM20Q8N5G0 67 aa10.7□□□□□ -0.7
TSPAN4-204ENST00000397404 C8orf17Q9NRJ1 99 aa10.7□□□□□ -0.7
TSPAN4-204ENST00000397404 LINC00313P59037 77 aa10.68□□□□□ -0.7
TSPAN4-204ENST00000397404 MMP24-AS1A0A0U1RRL7 71 aa10.68□□□□□ -0.7
TSPAN4-204ENST00000397404 hDV103S1A0JD37 113 aa10.68□□□□□ -0.7
TSPAN4-204ENST00000397404 CASC2Q6XLA1 102 aa10.68□□□□□ -0.7
TSPAN4-204ENST00000397404 ABCA13Q86UQ4 5058 aa10.66□□□□□ -0.7
TSPAN4-204ENST00000397404 TMEM254Q8TBM7 123 aa10.66□□□□□ -0.7
TSPAN4-204ENST00000397404 MRPL34Q9BQ48 92 aaKnown RBP10.61□□□□□ -0.71
TSPAN4-204ENST00000397404 WFDC13Q8IUB5 93 aa10.6□□□□□ -0.71
TSPAN4-204ENST00000397404 RETNLBQ9BQ08 111 aa10.58□□□□□ -0.72
TSPAN4-204ENST00000397404 TP53AIP1Q9HCN2 124 aa10.58□□□□□ -0.72
TSPAN4-204ENST00000397404 IGLV7-46A0A075B6I9 117 aa10.55□□□□□ -0.72
TSPAN4-204ENST00000397404 TRAV7A0A075B6U4 112 aa10.53□□□□□ -0.72
TSPAN4-204ENST00000397404 NOTCH2NLQ7Z3S9 236 aa10.53□□□□□ -0.72
TSPAN4-204ENST00000397404 Q8N9P0 234 aaPredicted RBP10.53□□□□□ -0.72
TSPAN4-204ENST00000397404 ANAPC13Q9BS18 74 aa10.52□□□□□ -0.73
TSPAN4-204ENST00000397404 SERP2Q8N6R1 65 aa10.51□□□□□ -0.73
TSPAN4-204ENST00000397404 OCR1Q9BZK8 76 aa10.51□□□□□ -0.73
TSPAN4-204ENST00000397404 UQCRQO14949 82 aa10.5□□□□□ -0.73
TSPAN4-204ENST00000397404 KRTAP16-1A8MUX0 517 aa10.49□□□□□ -0.73
TSPAN4-204ENST00000397404 PRR4Q16378 134 aa10.48□□□□□ -0.73
TSPAN4-204ENST00000397404 TPRXLQ17RH7 258 aa10.48□□□□□ -0.73
TSPAN4-204ENST00000397404 NDUFS5O43920 106 aa10.46□□□□□ -0.74
TSPAN4-204ENST00000397404 C5orf47Q569G3 176 aa10.45□□□□□ -0.74
TSPAN4-204ENST00000397404 KRTAP13-3Q3SY46 172 aa10.44□□□□□ -0.74
TSPAN4-204ENST00000397404 C20orf166-AS1Q96NR2 134 aa10.44□□□□□ -0.74
TSPAN4-204ENST00000397404 COX7CP15954 63 aa10.42□□□□□ -0.74
TSPAN4-204ENST00000397404 C9orf92A6NGG3 77 aa10.42□□□□□ -0.74
TSPAN4-204ENST00000397404 A8MUU9 505 aa10.42□□□□□ -0.74
TSPAN4-204ENST00000397404 Q75L30 129 aa10.41□□□□□ -0.74
TSPAN4-204ENST00000397404 H3BPC8 53 aa10.4□□□□□ -0.74
TSPAN4-204ENST00000397404 MP68P56378 58 aa10.39□□□□□ -0.75
TSPAN4-204ENST00000397404 TRAV22A0A0B4J277 110 aa10.38□□□□□ -0.75
TSPAN4-204ENST00000397404 PCLOQ9Y6V0 5065 aa10.36□□□□□ -0.75
TSPAN4-204ENST00000397404 PCP4P48539 62 aa10.34□□□□□ -0.75
TSPAN4-204ENST00000397404 XP32Q5T750 250 aa10.31□□□□□ -0.76
TSPAN4-204ENST00000397404 H0Y9P7 68 aa10.3□□□□□ -0.76
TSPAN4-204ENST00000397404 ZCCHC13Q8WW36 166 aaKnown RBP10.3□□□□□ -0.76
TSPAN4-204ENST00000397404 RPL37P61927 97 aaKnown RBP10.29□□□□□ -0.76
TSPAN4-204ENST00000397404 KLKP1Q107X0 134 aa10.28□□□□□ -0.76
TSPAN4-204ENST00000397404 ATP11AUNQ6ZP68 121 aa10.27□□□□□ -0.77
TSPAN4-204ENST00000397404 LOC101927531A0A1B0GV80 90 aa10.26□□□□□ -0.77
TSPAN4-204ENST00000397404 NDUFC1O43677 76 aa10.24□□□□□ -0.77
TSPAN4-204ENST00000397404 C20orf197Q8N268 126 aa10.24□□□□□ -0.77
TSPAN4-204ENST00000397404 A0A0U1RQV1 116 aa10.23□□□□□ -0.77
TSPAN4-204ENST00000397404 Q5W150 140 aa10.22□□□□□ -0.77
TSPAN4-204ENST00000397404 C1orf64Q8NEQ6 169 aa10.22□□□□□ -0.77
TSPAN4-204ENST00000397404 LINC00208Q96KT6 92 aa10.22□□□□□ -0.77
TSPAN4-204ENST00000397404 CCDC179H3BU77 68 aa10.18□□□□□ -0.78
TSPAN4-204ENST00000397404 IGKV2-30P06310 120 aa10.14□□□□□ -0.79
TSPAN4-204ENST00000397404 SEC61BP60468 96 aaKnown RBP10.14□□□□□ -0.79
TSPAN4-204ENST00000397404 C7orf65Q6ZTY9 151 aa10.14□□□□□ -0.79
TSPAN4-204ENST00000397404 SNURFQ9Y675 71 aa10.12□□□□□ -0.79
TSPAN4-204ENST00000397404 HERC1Q15751 4861 aa10.11□□□□□ -0.79
TSPAN4-204ENST00000397404 CYP4F30PQ9H0H9 118 aa10.1□□□□□ -0.79
TSPAN4-204ENST00000397404 IGKV2D-30A0A075B6S6 120 aa10.05□□□□□ -0.8
TSPAN4-204ENST00000397404 LPAP08519 4548 aa10.04□□□□□ -0.8
TSPAN4-204ENST00000397404 H7BZZ5 65 aa10.04□□□□□ -0.8
TSPAN4-204ENST00000397404 SPANXA2-OT1Q8N9U9 137 aa10.03□□□□□ -0.8
TSPAN4-204ENST00000397404 HMCN2Q8NDA2 5059 aa10.03□□□□□ -0.8
TSPAN4-204ENST00000397404 LRP2P98164 4655 aa10.03□□□□□ -0.8
TSPAN4-204ENST00000397404 SPINK7P58062 85 aa10.02□□□□□ -0.81
TSPAN4-204ENST00000397404 PCOTHQ58A44 107 aa10.02□□□□□ -0.81
TSPAN4-204ENST00000397404 TMEM258P61165 79 aa10.01□□□□□ -0.81
TSPAN4-204ENST00000397404 ATP5EP56381 51 aaPredicted RBP10□□□□□ -0.81
TSPAN4-204ENST00000397404 CYSTM1Q9H1C7 97 aa9.95□□□□□ -0.82
TSPAN4-204ENST00000397404 MUC17Q685J3 4493 aa9.93□□□□□ -0.82
TSPAN4-204ENST00000397404 HRES1P13985 223 aa9.91□□□□□ -0.82
TSPAN4-204ENST00000397404 FAM236DA0A1B0GTK5 79 aa9.87□□□□□ -0.83
TSPAN4-204ENST00000397404 A8MUN3 132 aa9.87□□□□□ -0.83
TSPAN4-204ENST00000397404 FAM236CP0DP71 79 aa9.87□□□□□ -0.83
TSPAN4-204ENST00000397404 DMAC1Q96GE9 116 aa9.8□□□□□ -0.84
TSPAN4-204ENST00000397404 RBM12B-AS1Q9P1G2 102 aa9.8□□□□□ -0.84
TSPAN4-204ENST00000397404 COX6B2Q6YFQ2 88 aa9.79□□□□□ -0.84
TSPAN4-204ENST00000397404 ACYP2P14621 99 aa9.78□□□□□ -0.84
TSPAN4-204ENST00000397404 C4orf26Q17RF5 130 aa9.76□□□□□ -0.85
TSPAN4-204ENST00000397404 MPLKIPQ8TAP9 179 aa9.76□□□□□ -0.85
TSPAN4-204ENST00000397404 SERP1Q9Y6X1 66 aa9.67□□□□□ -0.86
TSPAN4-204ENST00000397404 RPS28P62857 69 aaKnown RBP9.64□□□□□ -0.87
TSPAN4-204ENST00000397404 KRTAP4-1Q9BYQ7 146 aa9.63□□□□□ -0.87
TSPAN4-204ENST00000397404 H1FX-AS1Q4G0G2 97 aa9.6□□□□□ -0.87
TSPAN4-204ENST00000397404 KRTAP3-1Q9BYR8 98 aa9.6□□□□□ -0.87
TSPAN4-204ENST00000397404 COA5Q86WW8 74 aa9.59□□□□□ -0.87
TSPAN4-204ENST00000397404 CHKB-CPT1BH3BT56 60 aa9.57□□□□□ -0.88
TSPAN4-204ENST00000397404 SPTSSBQ8NFR3 76 aa9.55□□□□□ -0.88
TSPAN4-204ENST00000397404 UBR4Q5T4S7 5183 aa9.51□□□□□ -0.89
TSPAN4-204ENST00000397404 MUC2Q02817 5179 aa9.48□□□□□ -0.89
TSPAN4-204ENST00000397404 S4R3F8 94 aa9.47□□□□□ -0.89
TSPAN4-204ENST00000397404 KRTAP19-2Q3LHN2 52 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms