RNA–Protein interactions for RNA: ENST00000397087.7

RAPGEF4-203, Transcript of Rap guanine nucleotide exchange factor 4, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF4, Length 4,120 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4-203ENST00000397087 hDV103S1A0JD37 113 aa3.63□□□□□ -1.83
RAPGEF4-203ENST00000397087 XP32Q5T750 250 aa3.63□□□□□ -1.83
RAPGEF4-203ENST00000397087 C1orf134Q5TEV5 83 aa3.63□□□□□ -1.83
RAPGEF4-203ENST00000397087 CASC2Q6XLA1 102 aa3.63□□□□□ -1.83
RAPGEF4-203ENST00000397087 KRTAP11-1Q8IUC1 163 aa3.63□□□□□ -1.83
RAPGEF4-203ENST00000397087 C8orf87E5RJ46 101 aa3.63□□□□□ -1.83
RAPGEF4-203ENST00000397087 CIRBP-AS1Q8TBR5 109 aa3.63□□□□□ -1.83
RAPGEF4-203ENST00000397087 H0Y9P7 68 aa3.62□□□□□ -1.83
RAPGEF4-203ENST00000397087 IGLV7-43P04211 117 aa3.61□□□□□ -1.83
RAPGEF4-203ENST00000397087 MMP24-AS1A0A0U1RRL7 71 aa3.61□□□□□ -1.83
RAPGEF4-203ENST00000397087 PANO1I0J062 215 aa3.59□□□□□ -1.83
RAPGEF4-203ENST00000397087 C1orf195Q5TG92 126 aa3.59□□□□□ -1.83
RAPGEF4-203ENST00000397087 SACSQ9NZJ4 4579 aa3.59□□□□□ -1.83
RAPGEF4-203ENST00000397087 C1orf64Q8NEQ6 169 aa3.59□□□□□ -1.83
RAPGEF4-203ENST00000397087 PSORS1C2Q9UIG4 136 aa3.59□□□□□ -1.83
RAPGEF4-203ENST00000397087 PLECQ15149 4684 aaKnown RBP3.59□□□□□ -1.84
RAPGEF4-203ENST00000397087 TRAV22A0A0B4J277 110 aa3.59□□□□□ -1.84
RAPGEF4-203ENST00000397087 FP248Q71RG6 208 aaPredicted RBP3.59□□□□□ -1.84
RAPGEF4-203ENST00000397087 CHKB-CPT1BH3BT56 60 aa3.58□□□□□ -1.84
RAPGEF4-203ENST00000397087 A0A1B0GVX0 72 aa3.58□□□□□ -1.84
RAPGEF4-203ENST00000397087 PRR15LQ9BU68 103 aa3.58□□□□□ -1.84
RAPGEF4-203ENST00000397087 Q1T7F1 81 aa3.57□□□□□ -1.84
RAPGEF4-203ENST00000397087 FBN3Q75N90 2809 aa3.57□□□□□ -1.84
RAPGEF4-203ENST00000397087 A8MUN3 132 aa3.57□□□□□ -1.84
RAPGEF4-203ENST00000397087 V9GYY9 64 aa3.57□□□□□ -1.84
RAPGEF4-203ENST00000397087 KRTAP13-3Q3SY46 172 aa3.56□□□□□ -1.84
RAPGEF4-203ENST00000397087 KRTAP19-1Q8IUB9 90 aa3.56□□□□□ -1.84
RAPGEF4-203ENST00000397087 C8orf17Q9NRJ1 99 aa3.56□□□□□ -1.84
RAPGEF4-203ENST00000397087 PKHD1P08F94 4074 aa3.56□□□□□ -1.84
RAPGEF4-203ENST00000397087 A6NED7 52 aa3.55□□□□□ -1.84
RAPGEF4-203ENST00000397087 DNAH11Q96DT5 4516 aa3.55□□□□□ -1.84
RAPGEF4-203ENST00000397087 SPAG11AQ6PDA7 123 aa3.55□□□□□ -1.84
RAPGEF4-203ENST00000397087 PLA2G1BP04054 148 aaKnown RBP3.55□□□□□ -1.84
RAPGEF4-203ENST00000397087 FAT2Q9NYQ8 4349 aa3.55□□□□□ -1.84
RAPGEF4-203ENST00000397087 DNHD1Q96M86 4753 aa3.55□□□□□ -1.84
RAPGEF4-203ENST00000397087 PKD1P98161 4303 aa3.55□□□□□ -1.84
RAPGEF4-203ENST00000397087 IGLV7-46A0A075B6I9 117 aa3.55□□□□□ -1.84
RAPGEF4-203ENST00000397087 PRR26Q8N8Z3 221 aa3.55□□□□□ -1.84
RAPGEF4-203ENST00000397087 LIMD2Q9BT23 127 aa3.55□□□□□ -1.84
RAPGEF4-203ENST00000397087 STARD9Q9P2P6 4700 aa3.54□□□□□ -1.84
RAPGEF4-203ENST00000397087 KRTAP4-8Q9BYQ9 185 aa3.54□□□□□ -1.84
RAPGEF4-203ENST00000397087 LOC101927531A0A1B0GV80 90 aa3.53□□□□□ -1.84
RAPGEF4-203ENST00000397087 PRO0628Q9UI54 55 aa3.53□□□□□ -1.84
RAPGEF4-203ENST00000397087 Q8N9P0 234 aaPredicted RBP3.53□□□□□ -1.84
RAPGEF4-203ENST00000397087 MRPL34Q9BQ48 92 aaKnown RBP3.53□□□□□ -1.84
RAPGEF4-203ENST00000397087 KRTAP4-12Q9BQ66 201 aa3.53□□□□□ -1.84
RAPGEF4-203ENST00000397087 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.52□□□□□ -1.85
RAPGEF4-203ENST00000397087 DMBT1Q9UGM3 2413 aaPredicted RBP3.52□□□□□ -1.85
RAPGEF4-203ENST00000397087 SPINK1P00995 79 aa3.52□□□□□ -1.85
RAPGEF4-203ENST00000397087 PMAIP1Q13794 54 aa3.51□□□□□ -1.85
RAPGEF4-203ENST00000397087 KRTAP9-2Q9BYQ4 174 aa3.51□□□□□ -1.85
RAPGEF4-203ENST00000397087 KRTAP1-4P0C5Y4 121 aa3.5□□□□□ -1.85
RAPGEF4-203ENST00000397087 IGKV2D-30A0A075B6S6 120 aa3.5□□□□□ -1.85
RAPGEF4-203ENST00000397087 A0A1B0GVY2 172 aa3.5□□□□□ -1.85
RAPGEF4-203ENST00000397087 IGKV2-30P06310 120 aa3.5□□□□□ -1.85
RAPGEF4-203ENST00000397087 A8MU10 97 aa3.49□□□□□ -1.85
RAPGEF4-203ENST00000397087 MEGF8Q7Z7M0 2845 aa3.49□□□□□ -1.85
RAPGEF4-203ENST00000397087 DNAH5Q8TE73 4624 aa3.49□□□□□ -1.85
RAPGEF4-203ENST00000397087 COA5Q86WW8 74 aa3.49□□□□□ -1.85
RAPGEF4-203ENST00000397087 KRTAP16-1A8MUX0 517 aa3.48□□□□□ -1.85
RAPGEF4-203ENST00000397087 A0A087X002 238 aa3.48□□□□□ -1.85
RAPGEF4-203ENST00000397087 NOTCH2NLQ7Z3S9 236 aa3.48□□□□□ -1.85
RAPGEF4-203ENST00000397087 KRTAP9-6A0A140TA67 174 aa3.47□□□□□ -1.85
RAPGEF4-203ENST00000397087 SMR3BP02814 79 aaPredicted RBP3.46□□□□□ -1.85
RAPGEF4-203ENST00000397087 KRTAP13-2Q52LG2 175 aa3.46□□□□□ -1.85
RAPGEF4-203ENST00000397087 FLG2Q5D862 2391 aaPredicted RBP3.46□□□□□ -1.86
RAPGEF4-203ENST00000397087 KRTAP10-1P60331 282 aa3.46□□□□□ -1.86
RAPGEF4-203ENST00000397087 KRTAP10-2P60368 255 aa3.46□□□□□ -1.86
RAPGEF4-203ENST00000397087 KRTAP10-4P60372 401 aaPredicted RBP3.45□□□□□ -1.86
RAPGEF4-203ENST00000397087 DMAC1Q96GE9 116 aa3.43□□□□□ -1.86
RAPGEF4-203ENST00000397087 LCE4AQ5TA78 99 aa3.43□□□□□ -1.86
RAPGEF4-203ENST00000397087 LINC01558Q9Y6Z2 57 aa3.43□□□□□ -1.86
RAPGEF4-203ENST00000397087 LINC00313P59037 77 aa3.42□□□□□ -1.86
RAPGEF4-203ENST00000397087 Q75L30 129 aa3.42□□□□□ -1.86
RAPGEF4-203ENST00000397087 VPS13BQ7Z7G8 4022 aa3.42□□□□□ -1.86
RAPGEF4-203ENST00000397087 APOBP04114 4563 aaKnown RBP3.41□□□□□ -1.86
RAPGEF4-203ENST00000397087 C9orf92A6NGG3 77 aa3.41□□□□□ -1.86
RAPGEF4-203ENST00000397087 C20orf166-AS1Q96NR2 134 aa3.4□□□□□ -1.86
RAPGEF4-203ENST00000397087 DYNC1H1Q14204 4646 aaKnown RBP3.4□□□□□ -1.87
RAPGEF4-203ENST00000397087 Q5VV11 94 aa3.39□□□□□ -1.87
RAPGEF4-203ENST00000397087 Q8N1X5 172 aa3.39□□□□□ -1.87
RAPGEF4-203ENST00000397087 A8MUU9 505 aa3.39□□□□□ -1.87
RAPGEF4-203ENST00000397087 Q5W150 140 aa3.39□□□□□ -1.87
RAPGEF4-203ENST00000397087 C7orf65Q6ZTY9 151 aa3.39□□□□□ -1.87
RAPGEF4-203ENST00000397087 ACYP2P14621 99 aa3.38□□□□□ -1.87
RAPGEF4-203ENST00000397087 TYMSOSQ8TAI1 123 aa3.38□□□□□ -1.87
RAPGEF4-203ENST00000397087 KRTAP9-7A8MTY7 169 aa3.38□□□□□ -1.87
RAPGEF4-203ENST00000397087 KMT2AQ03164 3969 aa3.38□□□□□ -1.87
RAPGEF4-203ENST00000397087 HRES1P13985 223 aa3.38□□□□□ -1.87
RAPGEF4-203ENST00000397087 SPINK7P58062 85 aa3.37□□□□□ -1.87
RAPGEF4-203ENST00000397087 A0A1B0GU69 56 aa3.37□□□□□ -1.87
RAPGEF4-203ENST00000397087 LINC00304Q8N9R0 145 aa3.37□□□□□ -1.87
RAPGEF4-203ENST00000397087 HSPG2P98160 4391 aa3.36□□□□□ -1.87
RAPGEF4-203ENST00000397087 TNXBP22105 4242 aa3.36□□□□□ -1.87
RAPGEF4-203ENST00000397087 KRTAP9-9Q9BYP9 154 aa3.35□□□□□ -1.87
RAPGEF4-203ENST00000397087 KRTAP9-4Q9BYQ2 154 aa3.35□□□□□ -1.87
RAPGEF4-203ENST00000397087 ATP11AUNQ6ZP68 121 aa3.33□□□□□ -1.88
RAPGEF4-203ENST00000397087 KRTAP3-1Q9BYR8 98 aa3.33□□□□□ -1.88
RAPGEF4-203ENST00000397087 PRAC1Q96KF2 57 aa3.33□□□□□ -1.88
RAPGEF4-203ENST00000397087 LCA10Q71F78 164 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms