RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 RETNLBQ9BQ08 111 aa11.51□□□□□ -0.57
VCPKMT-202ENST00000395860 A0A1B0GVX0 72 aa11.51□□□□□ -0.57
VCPKMT-202ENST00000395860 IGHV6-1A0A0B4J1U7 121 aa11.5□□□□□ -0.57
VCPKMT-202ENST00000395860 J3QL48 77 aa11.49□□□□□ -0.57
VCPKMT-202ENST00000395860 DMBT1Q9UGM3 2413 aaPredicted RBP11.45□□□□□ -0.58
VCPKMT-202ENST00000395860 FAM236AA0A1B0GUQ0 79 aa11.44□□□□□ -0.58
VCPKMT-202ENST00000395860 FAM236BA0A1B0GV22 79 aa11.44□□□□□ -0.58
VCPKMT-202ENST00000395860 HCG22E2RYF7 251 aa11.44□□□□□ -0.58
VCPKMT-202ENST00000395860 C8orf17Q9NRJ1 99 aa11.43□□□□□ -0.58
VCPKMT-202ENST00000395860 WFDC13Q8IUB5 93 aa11.41□□□□□ -0.58
VCPKMT-202ENST00000395860 MMP24-AS1A0A0U1RRL7 71 aa11.41□□□□□ -0.58
VCPKMT-202ENST00000395860 C8orf87E5RJ46 101 aa11.4□□□□□ -0.58
VCPKMT-202ENST00000395860 NOTCH2NLQ7Z3S9 236 aa11.39□□□□□ -0.59
VCPKMT-202ENST00000395860 SCGB1A1P11684 91 aa11.38□□□□□ -0.59
VCPKMT-202ENST00000395860 LINC00313P59037 77 aa11.38□□□□□ -0.59
VCPKMT-202ENST00000395860 CASC2Q6XLA1 102 aa11.38□□□□□ -0.59
VCPKMT-202ENST00000395860 FP248Q71RG6 208 aaPredicted RBP11.37□□□□□ -0.59
VCPKMT-202ENST00000395860 hDV103S1A0JD37 113 aa11.36□□□□□ -0.59
VCPKMT-202ENST00000395860 PCP4P48539 62 aa11.33□□□□□ -0.6
VCPKMT-202ENST00000395860 IGLV7-46A0A075B6I9 117 aa11.3□□□□□ -0.6
VCPKMT-202ENST00000395860 TMEM254Q8TBM7 123 aa11.3□□□□□ -0.6
VCPKMT-202ENST00000395860 PRR4Q16378 134 aa11.29□□□□□ -0.6
VCPKMT-202ENST00000395860 C9orf92A6NGG3 77 aa11.28□□□□□ -0.6
VCPKMT-202ENST00000395860 ATOX1O00244 68 aa11.28□□□□□ -0.6
VCPKMT-202ENST00000395860 MRPL34Q9BQ48 92 aaKnown RBP11.28□□□□□ -0.6
VCPKMT-202ENST00000395860 KRTAP16-1A8MUX0 517 aa11.24□□□□□ -0.61
VCPKMT-202ENST00000395860 PCLOQ9Y6V0 5065 aa11.23□□□□□ -0.61
VCPKMT-202ENST00000395860 NDUFS5O43920 106 aa11.22□□□□□ -0.61
VCPKMT-202ENST00000395860 SMIM20Q8N5G0 67 aa11.2□□□□□ -0.62
VCPKMT-202ENST00000395860 ANAPC13Q9BS18 74 aa11.19□□□□□ -0.62
VCPKMT-202ENST00000395860 OCR1Q9BZK8 76 aa11.18□□□□□ -0.62
VCPKMT-202ENST00000395860 KRTAP13-3Q3SY46 172 aa11.18□□□□□ -0.62
VCPKMT-202ENST00000395860 Q8N9P0 234 aaPredicted RBP11.17□□□□□ -0.62
VCPKMT-202ENST00000395860 TRAV7A0A075B6U4 112 aa11.15□□□□□ -0.62
VCPKMT-202ENST00000395860 TP53AIP1Q9HCN2 124 aa11.13□□□□□ -0.63
VCPKMT-202ENST00000395860 SERP2Q8N6R1 65 aa11.13□□□□□ -0.63
VCPKMT-202ENST00000395860 TPRXLQ17RH7 258 aa11.12□□□□□ -0.63
VCPKMT-202ENST00000395860 UQCRQO14949 82 aa11.11□□□□□ -0.63
VCPKMT-202ENST00000395860 C20orf166-AS1Q96NR2 134 aa11.1□□□□□ -0.63
VCPKMT-202ENST00000395860 A8MUU9 505 aa11.08□□□□□ -0.64
VCPKMT-202ENST00000395860 XP32Q5T750 250 aa11.06□□□□□ -0.64
VCPKMT-202ENST00000395860 COX7CP15954 63 aa11.05□□□□□ -0.64
VCPKMT-202ENST00000395860 Q75L30 129 aa11.04□□□□□ -0.64
VCPKMT-202ENST00000395860 C5orf47Q569G3 176 aa11.03□□□□□ -0.64
VCPKMT-202ENST00000395860 TRAV22A0A0B4J277 110 aa11.01□□□□□ -0.65
VCPKMT-202ENST00000395860 Q5W150 140 aa11□□□□□ -0.65
VCPKMT-202ENST00000395860 H0Y9P7 68 aa11□□□□□ -0.65
VCPKMT-202ENST00000395860 MP68P56378 58 aa10.98□□□□□ -0.65
VCPKMT-202ENST00000395860 RPL37P61927 97 aaKnown RBP10.98□□□□□ -0.65
VCPKMT-202ENST00000395860 ZCCHC13Q8WW36 166 aaKnown RBP10.98□□□□□ -0.65
VCPKMT-202ENST00000395860 C20orf197Q8N268 126 aa10.94□□□□□ -0.66
VCPKMT-202ENST00000395860 CCDC179H3BU77 68 aa10.93□□□□□ -0.66
VCPKMT-202ENST00000395860 ATP11AUNQ6ZP68 121 aa10.93□□□□□ -0.66
VCPKMT-202ENST00000395860 LINC00208Q96KT6 92 aa10.92□□□□□ -0.66
VCPKMT-202ENST00000395860 LPAP08519 4548 aa10.91□□□□□ -0.66
VCPKMT-202ENST00000395860 H3BPC8 53 aa10.9□□□□□ -0.67
VCPKMT-202ENST00000395860 SNURFQ9Y675 71 aa10.89□□□□□ -0.67
VCPKMT-202ENST00000395860 A0A0U1RQV1 116 aa10.88□□□□□ -0.67
VCPKMT-202ENST00000395860 C1orf64Q8NEQ6 169 aa10.88□□□□□ -0.67
VCPKMT-202ENST00000395860 HERC1Q15751 4861 aa10.87□□□□□ -0.67
VCPKMT-202ENST00000395860 KLKP1Q107X0 134 aa10.85□□□□□ -0.67
VCPKMT-202ENST00000395860 LOC101927531A0A1B0GV80 90 aa10.83□□□□□ -0.68
VCPKMT-202ENST00000395860 PCOTHQ58A44 107 aa10.8□□□□□ -0.68
VCPKMT-202ENST00000395860 IGKV2D-30A0A075B6S6 120 aa10.8□□□□□ -0.68
VCPKMT-202ENST00000395860 IGKV2-30P06310 120 aa10.8□□□□□ -0.68
VCPKMT-202ENST00000395860 LRP2P98164 4655 aa10.77□□□□□ -0.68
VCPKMT-202ENST00000395860 CYP4F30PQ9H0H9 118 aa10.77□□□□□ -0.69
VCPKMT-202ENST00000395860 CYSTM1Q9H1C7 97 aa10.77□□□□□ -0.69
VCPKMT-202ENST00000395860 SEC61BP60468 96 aaKnown RBP10.76□□□□□ -0.69
VCPKMT-202ENST00000395860 C7orf65Q6ZTY9 151 aa10.75□□□□□ -0.69
VCPKMT-202ENST00000395860 HMCN2Q8NDA2 5059 aa10.73□□□□□ -0.69
VCPKMT-202ENST00000395860 NDUFC1O43677 76 aa10.71□□□□□ -0.69
VCPKMT-202ENST00000395860 SPINK7P58062 85 aa10.71□□□□□ -0.69
VCPKMT-202ENST00000395860 H7BZZ5 65 aa10.67□□□□□ -0.7
VCPKMT-202ENST00000395860 HRES1P13985 223 aa10.6□□□□□ -0.71
VCPKMT-202ENST00000395860 MUC17Q685J3 4493 aa10.54□□□□□ -0.72
VCPKMT-202ENST00000395860 TMEM258P61165 79 aa10.54□□□□□ -0.72
VCPKMT-202ENST00000395860 SPANXA2-OT1Q8N9U9 137 aa10.53□□□□□ -0.72
VCPKMT-202ENST00000395860 C4orf26Q17RF5 130 aa10.52□□□□□ -0.73
VCPKMT-202ENST00000395860 KRTAP4-1Q9BYQ7 146 aa10.49□□□□□ -0.73
VCPKMT-202ENST00000395860 FAM236DA0A1B0GTK5 79 aa10.47□□□□□ -0.73
VCPKMT-202ENST00000395860 FAM236CP0DP71 79 aa10.47□□□□□ -0.73
VCPKMT-202ENST00000395860 ATP5EP56381 51 aaPredicted RBP10.44□□□□□ -0.74
VCPKMT-202ENST00000395860 COX6B2Q6YFQ2 88 aa10.41□□□□□ -0.74
VCPKMT-202ENST00000395860 RBM12B-AS1Q9P1G2 102 aa10.39□□□□□ -0.75
VCPKMT-202ENST00000395860 DMAC1Q96GE9 116 aa10.39□□□□□ -0.75
VCPKMT-202ENST00000395860 MPLKIPQ8TAP9 179 aa10.38□□□□□ -0.75
VCPKMT-202ENST00000395860 A8MUN3 132 aa10.34□□□□□ -0.75
VCPKMT-202ENST00000395860 KRTAP3-1Q9BYR8 98 aa10.34□□□□□ -0.75
VCPKMT-202ENST00000395860 ACYP2P14621 99 aa10.32□□□□□ -0.76
VCPKMT-202ENST00000395860 SVIPQ8NHG7 77 aa10.29□□□□□ -0.76
VCPKMT-202ENST00000395860 UBR4Q5T4S7 5183 aa10.24□□□□□ -0.77
VCPKMT-202ENST00000395860 COA5Q86WW8 74 aa10.23□□□□□ -0.77
VCPKMT-202ENST00000395860 H1FX-AS1Q4G0G2 97 aa10.21□□□□□ -0.77
VCPKMT-202ENST00000395860 SERP1Q9Y6X1 66 aa10.21□□□□□ -0.78
VCPKMT-202ENST00000395860 MUC2Q02817 5179 aa10.19□□□□□ -0.78
VCPKMT-202ENST00000395860 CHKB-CPT1BH3BT56 60 aa10.17□□□□□ -0.78
VCPKMT-202ENST00000395860 KRTAP19-2Q3LHN2 52 aa10.16□□□□□ -0.78
VCPKMT-202ENST00000395860 RNF213Q63HN8 5207 aa10.15□□□□□ -0.78
VCPKMT-202ENST00000395860 S4R3F8 94 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms