RNA–Protein interactions for RNA: ENST00000395090.5

RTN1-203, Transcript of reticulon 1, humanhuman

TSL 2 BASIC

Gene RTN1, Length 1,609 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-203ENST00000395090 CRYGAP11844 174 aa6.7□□□□□ -1.34
RTN1-203ENST00000395090 SSBP3-AS1Q7Z2R9 100 aa6.7□□□□□ -1.34
RTN1-203ENST00000395090 KIAA1109Q2LD37 5005 aa6.7□□□□□ -1.34
RTN1-203ENST00000395090 KRTAP29-1A8MX34 341 aaPredicted RBP6.69□□□□□ -1.34
RTN1-203ENST00000395090 MOBPQ13875 183 aa6.69□□□□□ -1.34
RTN1-203ENST00000395090 KRTAP13-2Q52LG2 175 aa6.69□□□□□ -1.34
RTN1-203ENST00000395090 Q8NBF4 154 aa6.69□□□□□ -1.34
RTN1-203ENST00000395090 C9orf153Q5TBE3 101 aa6.68□□□□□ -1.34
RTN1-203ENST00000395090 ATP5EP2Q5VTU8 51 aa6.68□□□□□ -1.34
RTN1-203ENST00000395090 ATOX1O00244 68 aa6.65□□□□□ -1.34
RTN1-203ENST00000395090 IGKV3D-7A0A0C4DH55 119 aa6.64□□□□□ -1.35
RTN1-203ENST00000395090 CD164Q04900 197 aa6.64□□□□□ -1.35
RTN1-203ENST00000395090 UQCRQO14949 82 aa6.62□□□□□ -1.35
RTN1-203ENST00000395090 SS18L2Q9UHA2 77 aa6.62□□□□□ -1.35
RTN1-203ENST00000395090 TYMSOSQ8TAI1 123 aa6.61□□□□□ -1.35
RTN1-203ENST00000395090 UBL5Q9BZL1 73 aa6.61□□□□□ -1.35
RTN1-203ENST00000395090 A0A087WVE0 104 aa6.6□□□□□ -1.35
RTN1-203ENST00000395090 COX7CP15954 63 aa6.6□□□□□ -1.35
RTN1-203ENST00000395090 A0A087WSZ3 146 aa6.59□□□□□ -1.35
RTN1-203ENST00000395090 Q6ZVQ6 151 aa6.59□□□□□ -1.35
RTN1-203ENST00000395090 PKHD1L1Q86WI1 4243 aa6.58□□□□□ -1.36
RTN1-203ENST00000395090 KRTAP10-8P60410 259 aa6.58□□□□□ -1.36
RTN1-203ENST00000395090 NREPQ16612 68 aa6.58□□□□□ -1.36
RTN1-203ENST00000395090 HRCT1Q6UXD1 115 aa6.58□□□□□ -1.36
RTN1-203ENST00000395090 Q5XG85 94 aa6.57□□□□□ -1.36
RTN1-203ENST00000395090 SPAG11AQ6PDA7 123 aa6.56□□□□□ -1.36
RTN1-203ENST00000395090 SPINK1P00995 79 aa6.55□□□□□ -1.36
RTN1-203ENST00000395090 SERP2Q8N6R1 65 aa6.55□□□□□ -1.36
RTN1-203ENST00000395090 ASB16-AS1Q495Z4 193 aa6.54□□□□□ -1.36
RTN1-203ENST00000395090 LINC00472Q9H8W2 130 aa6.54□□□□□ -1.36
RTN1-203ENST00000395090 BIRC6Q9NR09 4857 aa6.54□□□□□ -1.36
RTN1-203ENST00000395090 FLG2Q5D862 2391 aaPredicted RBP6.54□□□□□ -1.36
RTN1-203ENST00000395090 RPS29P62273 56 aaKnown RBP6.54□□□□□ -1.36
RTN1-203ENST00000395090 CXCL6P80162 114 aa6.54□□□□□ -1.36
RTN1-203ENST00000395090 LINC00304Q8N9R0 145 aa6.54□□□□□ -1.36
RTN1-203ENST00000395090 Q96NJ1 140 aa6.51□□□□□ -1.37
RTN1-203ENST00000395090 OXTP01178 125 aa6.5□□□□□ -1.37
RTN1-203ENST00000395090 PRAC1Q96KF2 57 aa6.5□□□□□ -1.37
RTN1-203ENST00000395090 BPY2O14599 106 aa6.5□□□□□ -1.37
RTN1-203ENST00000395090 MT1HL1P0DM35 61 aa6.5□□□□□ -1.37
RTN1-203ENST00000395090 LIMD2Q9BT23 127 aa6.5□□□□□ -1.37
RTN1-203ENST00000395090 LRP1Q07954 4544 aaKnown RBP6.49□□□□□ -1.37
RTN1-203ENST00000395090 DSCR10P59022 87 aa6.48□□□□□ -1.37
RTN1-203ENST00000395090 CYSTM1Q9H1C7 97 aa6.48□□□□□ -1.37
RTN1-203ENST00000395090 J3KT08 172 aa6.47□□□□□ -1.37
RTN1-203ENST00000395090 DEFB116Q30KQ4 102 aa6.47□□□□□ -1.37
RTN1-203ENST00000395090 C1orf195Q5TG92 126 aa6.47□□□□□ -1.37
RTN1-203ENST00000395090 HERC2O95714 4834 aa6.46□□□□□ -1.38
RTN1-203ENST00000395090 TMEM258P61165 79 aa6.46□□□□□ -1.38
RTN1-203ENST00000395090 SMIM20Q8N5G0 67 aa6.45□□□□□ -1.38
RTN1-203ENST00000395090 IGKV4-1P06312 121 aa6.44□□□□□ -1.38
RTN1-203ENST00000395090 MYCBP2O75592 4640 aa6.44□□□□□ -1.38
RTN1-203ENST00000395090 FAT3Q8TDW7 4589 aa6.44□□□□□ -1.38
RTN1-203ENST00000395090 TRAV7A0A075B6U4 112 aa6.43□□□□□ -1.38
RTN1-203ENST00000395090 A8MWP4 228 aa6.43□□□□□ -1.38
RTN1-203ENST00000395090 DMBT1Q9UGM3 2413 aaPredicted RBP6.43□□□□□ -1.38
RTN1-203ENST00000395090 TNXBP22105 4242 aa6.43□□□□□ -1.38
RTN1-203ENST00000395090 NOTCH2NLQ7Z3S9 236 aa6.43□□□□□ -1.38
RTN1-203ENST00000395090 Q8N9L7 120 aa6.42□□□□□ -1.38
RTN1-203ENST00000395090 K7EQZ3 153 aa6.41□□□□□ -1.38
RTN1-203ENST00000395090 PRR15Q8IV56 129 aa6.41□□□□□ -1.38
RTN1-203ENST00000395090 NDUFB1O75438 58 aa6.39□□□□□ -1.39
RTN1-203ENST00000395090 KLKP1Q107X0 134 aa6.39□□□□□ -1.39
RTN1-203ENST00000395090 MT3P25713 68 aa6.38□□□□□ -1.39
RTN1-203ENST00000395090 C20orf197Q8N268 126 aa6.38□□□□□ -1.39
RTN1-203ENST00000395090 A0A1B0GVX0 72 aa6.37□□□□□ -1.39
RTN1-203ENST00000395090 RPS28P62857 69 aaKnown RBP6.37□□□□□ -1.39
RTN1-203ENST00000395090 ABCA13Q86UQ4 5058 aa6.36□□□□□ -1.39
RTN1-203ENST00000395090 H7BZZ5 65 aa6.35□□□□□ -1.39
RTN1-203ENST00000395090 IGHV6-1A0A0B4J1U7 121 aa6.33□□□□□ -1.4
RTN1-203ENST00000395090 HCG22E2RYF7 251 aa6.32□□□□□ -1.4
RTN1-203ENST00000395090 RETNLBQ9BQ08 111 aa6.32□□□□□ -1.4
RTN1-203ENST00000395090 OCR1Q9BZK8 76 aa6.32□□□□□ -1.4
RTN1-203ENST00000395090 C8orf17Q9NRJ1 99 aa6.32□□□□□ -1.4
RTN1-203ENST00000395090 MMP24-AS1A0A0U1RRL7 71 aa6.32□□□□□ -1.4
RTN1-203ENST00000395090 FAM236DA0A1B0GTK5 79 aa6.32□□□□□ -1.4
RTN1-203ENST00000395090 FAM236CP0DP71 79 aa6.32□□□□□ -1.4
RTN1-203ENST00000395090 FP248Q71RG6 208 aaPredicted RBP6.32□□□□□ -1.4
RTN1-203ENST00000395090 C8orf87E5RJ46 101 aa6.31□□□□□ -1.4
RTN1-203ENST00000395090 LINC00313P59037 77 aa6.3□□□□□ -1.4
RTN1-203ENST00000395090 NDUFC1O43677 76 aa6.29□□□□□ -1.4
RTN1-203ENST00000395090 hDV103S1A0JD37 113 aa6.28□□□□□ -1.4
RTN1-203ENST00000395090 CASC2Q6XLA1 102 aa6.28□□□□□ -1.4
RTN1-203ENST00000395090 TMEM254Q8TBM7 123 aa6.28□□□□□ -1.4
RTN1-203ENST00000395090 SNURFQ9Y675 71 aa6.28□□□□□ -1.4
RTN1-203ENST00000395090 WFDC13Q8IUB5 93 aa6.28□□□□□ -1.4
RTN1-203ENST00000395090 A0A0U1RQV1 116 aa6.26□□□□□ -1.41
RTN1-203ENST00000395090 ATP5EP56381 51 aaPredicted RBP6.26□□□□□ -1.41
RTN1-203ENST00000395090 KRTAP16-1A8MUX0 517 aa6.25□□□□□ -1.41
RTN1-203ENST00000395090 IGLV7-46A0A075B6I9 117 aa6.25□□□□□ -1.41
RTN1-203ENST00000395090 MRPL34Q9BQ48 92 aaKnown RBP6.25□□□□□ -1.41
RTN1-203ENST00000395090 SERP1Q9Y6X1 66 aa6.24□□□□□ -1.41
RTN1-203ENST00000395090 KRTAP2-2Q9BYT5 123 aa6.23□□□□□ -1.41
RTN1-203ENST00000395090 KRTAP13-3Q3SY46 172 aa6.21□□□□□ -1.42
RTN1-203ENST00000395090 PCLOQ9Y6V0 5065 aa6.21□□□□□ -1.42
RTN1-203ENST00000395090 C9orf92A6NGG3 77 aa6.2□□□□□ -1.42
RTN1-203ENST00000395090 PRR4Q16378 134 aa6.2□□□□□ -1.42
RTN1-203ENST00000395090 ZCCHC13Q8WW36 166 aaKnown RBP6.18□□□□□ -1.42
RTN1-203ENST00000395090 TP53AIP1Q9HCN2 124 aa6.18□□□□□ -1.42
RTN1-203ENST00000395090 TPRXLQ17RH7 258 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms