RNA–Protein interactions for RNA: ENST00000394803.9

UBE2D3-208, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-208ENST00000394803 HRES1P13985 223 aa5.97□□□□□ -1.45
UBE2D3-208ENST00000394803 DNAH10Q8IVF4 4471 aa5.96□□□□□ -1.46
UBE2D3-208ENST00000394803 IGLV7-43P04211 117 aa5.95□□□□□ -1.46
UBE2D3-208ENST00000394803 ACYP2P14621 99 aa5.95□□□□□ -1.46
UBE2D3-208ENST00000394803 SPAG11AQ6PDA7 123 aa5.95□□□□□ -1.46
UBE2D3-208ENST00000394803 DNAH9Q9NYC9 4486 aa5.94□□□□□ -1.46
UBE2D3-208ENST00000394803 KTN1-AS1Q86SY8 53 aa5.94□□□□□ -1.46
UBE2D3-208ENST00000394803 SPTSSBQ8NFR3 76 aa5.94□□□□□ -1.46
UBE2D3-208ENST00000394803 FBN3Q75N90 2809 aa5.94□□□□□ -1.46
UBE2D3-208ENST00000394803 C4orf48Q5BLP8 95 aa5.93□□□□□ -1.46
UBE2D3-208ENST00000394803 SPINK6Q6UWN8 80 aa5.93□□□□□ -1.46
UBE2D3-208ENST00000394803 LCA10Q71F78 164 aa5.93□□□□□ -1.46
UBE2D3-208ENST00000394803 FAM229AH3BQW9 127 aa5.92□□□□□ -1.46
UBE2D3-208ENST00000394803 CIRBP-AS1Q8TBR5 109 aa5.92□□□□□ -1.46
UBE2D3-208ENST00000394803 STAB2Q8WWQ8 2551 aa5.92□□□□□ -1.46
UBE2D3-208ENST00000394803 C1orf134Q5TEV5 83 aa5.91□□□□□ -1.46
UBE2D3-208ENST00000394803 TGP01266 2768 aa5.91□□□□□ -1.46
UBE2D3-208ENST00000394803 TENM2Q9NT68 2774 aa5.91□□□□□ -1.46
UBE2D3-208ENST00000394803 KRTAP13-3Q3SY46 172 aa5.91□□□□□ -1.46
UBE2D3-208ENST00000394803 ANAPC11Q9NYG5 84 aa5.9□□□□□ -1.46
UBE2D3-208ENST00000394803 A0A087X002 238 aa5.9□□□□□ -1.47
UBE2D3-208ENST00000394803 LINC00313P59037 77 aa5.9□□□□□ -1.47
UBE2D3-208ENST00000394803 NOTCH2NLQ7Z3S9 236 aa5.9□□□□□ -1.47
UBE2D3-208ENST00000394803 SRRM2Q9UQ35 2752 aaKnown RBP5.89□□□□□ -1.47
UBE2D3-208ENST00000394803 A6NN06 94 aa5.87□□□□□ -1.47
UBE2D3-208ENST00000394803 A8MU10 97 aa5.87□□□□□ -1.47
UBE2D3-208ENST00000394803 DMAC1Q96GE9 116 aa5.87□□□□□ -1.47
UBE2D3-208ENST00000394803 Q5W150 140 aa5.87□□□□□ -1.47
UBE2D3-208ENST00000394803 CSMD3Q7Z407 3707 aa5.86□□□□□ -1.47
UBE2D3-208ENST00000394803 LYSTQ99698 3801 aa5.85□□□□□ -1.47
UBE2D3-208ENST00000394803 C7orf65Q6ZTY9 151 aa5.84□□□□□ -1.47
UBE2D3-208ENST00000394803 STARD9Q9P2P6 4700 aa5.84□□□□□ -1.48
UBE2D3-208ENST00000394803 VPS13DQ5THJ4 4388 aa5.83□□□□□ -1.48
UBE2D3-208ENST00000394803 IGKV2-30P06310 120 aa5.83□□□□□ -1.48
UBE2D3-208ENST00000394803 SPINK7P58062 85 aa5.83□□□□□ -1.48
UBE2D3-208ENST00000394803 PRR26Q8N8Z3 221 aa5.82□□□□□ -1.48
UBE2D3-208ENST00000394803 DNAH7Q8WXX0 4024 aa5.81□□□□□ -1.48
UBE2D3-208ENST00000394803 PLECQ15149 4684 aaKnown RBP5.8□□□□□ -1.48
UBE2D3-208ENST00000394803 A0A1B0GU69 56 aa5.8□□□□□ -1.48
UBE2D3-208ENST00000394803 DNAH17Q9UFH2 4485 aa5.78□□□□□ -1.48
UBE2D3-208ENST00000394803 LY6G6CO95867 125 aa5.76□□□□□ -1.49
UBE2D3-208ENST00000394803 DNAH8Q96JB1 4490 aa5.76□□□□□ -1.49
UBE2D3-208ENST00000394803 RBM12B-AS1Q9P1G2 102 aa5.75□□□□□ -1.49
UBE2D3-208ENST00000394803 KRTAP16-1A8MUX0 517 aa5.74□□□□□ -1.49
UBE2D3-208ENST00000394803 KRTAP13-2Q52LG2 175 aa5.74□□□□□ -1.49
UBE2D3-208ENST00000394803 HECTD4Q9Y4D8 3996 aa5.74□□□□□ -1.49
UBE2D3-208ENST00000394803 UQCR11O14957 56 aa5.74□□□□□ -1.49
UBE2D3-208ENST00000394803 Q6ZSA8 131 aa5.74□□□□□ -1.49
UBE2D3-208ENST00000394803 SPATA8Q6RVD6 105 aa5.72□□□□□ -1.49
UBE2D3-208ENST00000394803 ALMS1Q8TCU4 4167 aa5.72□□□□□ -1.49
UBE2D3-208ENST00000394803 SPINK1P00995 79 aa5.72□□□□□ -1.49
UBE2D3-208ENST00000394803 IGKV2D-30A0A075B6S6 120 aa5.71□□□□□ -1.5
UBE2D3-208ENST00000394803 RETNLBQ9BQ08 111 aa5.71□□□□□ -1.5
UBE2D3-208ENST00000394803 KRTAP10-2P60368 255 aa5.7□□□□□ -1.5
UBE2D3-208ENST00000394803 MIR22HGQ0VDD5 57 aa5.7□□□□□ -1.5
UBE2D3-208ENST00000394803 RPS29P62273 56 aaKnown RBP5.69□□□□□ -1.5
UBE2D3-208ENST00000394803 TYMSOSQ8TAI1 123 aa5.68□□□□□ -1.5
UBE2D3-208ENST00000394803 KRTAP1-4P0C5Y4 121 aa5.67□□□□□ -1.5
UBE2D3-208ENST00000394803 DNAH6Q9C0G6 4158 aa5.66□□□□□ -1.5
UBE2D3-208ENST00000394803 DNAH2Q9P225 4427 aa5.66□□□□□ -1.5
UBE2D3-208ENST00000394803 PLA2G1BP04054 148 aaKnown RBP5.66□□□□□ -1.5
UBE2D3-208ENST00000394803 HYDINQ4G0P3 5121 aa5.66□□□□□ -1.5
UBE2D3-208ENST00000394803 KMT2AQ03164 3969 aa5.65□□□□□ -1.5
UBE2D3-208ENST00000394803 KRTAP10-1P60331 282 aa5.64□□□□□ -1.51
UBE2D3-208ENST00000394803 FRAS1Q86XX4 4008 aa5.64□□□□□ -1.51
UBE2D3-208ENST00000394803 KMT2CQ8NEZ4 4911 aaKnown RBP5.61□□□□□ -1.51
UBE2D3-208ENST00000394803 LINC00304Q8N9R0 145 aa5.6□□□□□ -1.51
UBE2D3-208ENST00000394803 SACSQ9NZJ4 4579 aa5.56□□□□□ -1.52
UBE2D3-208ENST00000394803 DNAH11Q96DT5 4516 aa5.56□□□□□ -1.52
UBE2D3-208ENST00000394803 RYR2Q92736 4967 aa5.55□□□□□ -1.52
UBE2D3-208ENST00000394803 RYR3Q15413 4870 aa5.53□□□□□ -1.52
UBE2D3-208ENST00000394803 DNAH5Q8TE73 4624 aa5.52□□□□□ -1.53
UBE2D3-208ENST00000394803 Q8N1X5 172 aa5.52□□□□□ -1.53
UBE2D3-208ENST00000394803 C20orf166-AS1Q96NR2 134 aa5.52□□□□□ -1.53
UBE2D3-208ENST00000394803 A8MUU9 505 aa5.51□□□□□ -1.53
UBE2D3-208ENST00000394803 J3QL48 77 aa5.51□□□□□ -1.53
UBE2D3-208ENST00000394803 PRAC1Q96KF2 57 aa5.51□□□□□ -1.53
UBE2D3-208ENST00000394803 LINC01554Q52M75 96 aa5.5□□□□□ -1.53
UBE2D3-208ENST00000394803 ADM2Q7Z4H4 148 aa5.46□□□□□ -1.54
UBE2D3-208ENST00000394803 PKD1P98161 4303 aa5.45□□□□□ -1.54
UBE2D3-208ENST00000394803 A0A1B0GU33 70 aa5.44□□□□□ -1.54
UBE2D3-208ENST00000394803 LRP1BQ9NZR2 4599 aa5.44□□□□□ -1.54
UBE2D3-208ENST00000394803 FAT2Q9NYQ8 4349 aa5.43□□□□□ -1.54
UBE2D3-208ENST00000394803 K7ERS5 55 aa5.43□□□□□ -1.54
UBE2D3-208ENST00000394803 C9orf92A6NGG3 77 aa5.42□□□□□ -1.54
UBE2D3-208ENST00000394803 H1FX-AS1Q4G0G2 97 aa5.42□□□□□ -1.54
UBE2D3-208ENST00000394803 CSAG1Q6PB30 78 aa5.41□□□□□ -1.54
UBE2D3-208ENST00000394803 H0YAA0 97 aa5.4□□□□□ -1.55
UBE2D3-208ENST00000394803 VPS13BQ7Z7G8 4022 aa5.39□□□□□ -1.55
UBE2D3-208ENST00000394803 COX6B2Q6YFQ2 88 aa5.39□□□□□ -1.55
UBE2D3-208ENST00000394803 PKHD1P08F94 4074 aa5.38□□□□□ -1.55
UBE2D3-208ENST00000394803 KRTAP3-1Q9BYR8 98 aa5.36□□□□□ -1.55
UBE2D3-208ENST00000394803 SMR3BP02814 79 aaPredicted RBP5.35□□□□□ -1.55
UBE2D3-208ENST00000394803 EPPK1P58107 5090 aaKnown RBP5.34□□□□□ -1.55
UBE2D3-208ENST00000394803 KRTAP10-4P60372 401 aaPredicted RBP5.31□□□□□ -1.56
UBE2D3-208ENST00000394803 KRTAP25-1Q3LHN0 102 aa5.31□□□□□ -1.56
UBE2D3-208ENST00000394803 DYNC1H1Q14204 4646 aaKnown RBP5.3□□□□□ -1.56
UBE2D3-208ENST00000394803 A0A1B0GVY2 172 aa5.3□□□□□ -1.56
UBE2D3-208ENST00000394803 PKHD1L1Q86WI1 4243 aa5.28□□□□□ -1.56
UBE2D3-208ENST00000394803 RPL37P61927 97 aaKnown RBP5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms