RNA–Protein interactions for RNA: ENST00000394258.6

RCCD1-201, Transcript of RCC1 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RCCD1, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-201ENST00000394258 PCOTHQ58A44 107 aa11.65□□□□□ -0.54
RCCD1-201ENST00000394258 KRTAP10-2P60368 255 aa11.64□□□□□ -0.55
RCCD1-201ENST00000394258 LCA10Q71F78 164 aa11.63□□□□□ -0.55
RCCD1-201ENST00000394258 IGLV7-43P04211 117 aa11.63□□□□□ -0.55
RCCD1-201ENST00000394258 A6NED7 52 aa11.62□□□□□ -0.55
RCCD1-201ENST00000394258 LIMD2Q9BT23 127 aa11.61□□□□□ -0.55
RCCD1-201ENST00000394258 C8orf17Q9NRJ1 99 aa11.61□□□□□ -0.55
RCCD1-201ENST00000394258 SPINK6Q6UWN8 80 aa11.6□□□□□ -0.55
RCCD1-201ENST00000394258 COA5Q86WW8 74 aa11.6□□□□□ -0.55
RCCD1-201ENST00000394258 A0A087X002 238 aa11.6□□□□□ -0.55
RCCD1-201ENST00000394258 NOTCH2NLQ7Z3S9 236 aa11.6□□□□□ -0.55
RCCD1-201ENST00000394258 SPANXA2-OT1Q8N9U9 137 aa11.6□□□□□ -0.55
RCCD1-201ENST00000394258 CIRBP-AS1Q8TBR5 109 aa11.6□□□□□ -0.55
RCCD1-201ENST00000394258 NDUFS5O43920 106 aa11.59□□□□□ -0.55
RCCD1-201ENST00000394258 CDK2AP2O75956 126 aa11.59□□□□□ -0.55
RCCD1-201ENST00000394258 H3BPC8 53 aa11.58□□□□□ -0.56
RCCD1-201ENST00000394258 A0A1B0GVX0 72 aa11.57□□□□□ -0.56
RCCD1-201ENST00000394258 ASB16-AS1Q495Z4 193 aa11.56□□□□□ -0.56
RCCD1-201ENST00000394258 ALMS1Q8TCU4 4167 aa11.56□□□□□ -0.56
RCCD1-201ENST00000394258 SPAG11AQ6PDA7 123 aa11.55□□□□□ -0.56
RCCD1-201ENST00000394258 DNAH11Q96DT5 4516 aa11.55□□□□□ -0.56
RCCD1-201ENST00000394258 KTN1-AS1Q86SY8 53 aa11.53□□□□□ -0.56
RCCD1-201ENST00000394258 DNAH5Q8TE73 4624 aa11.52□□□□□ -0.56
RCCD1-201ENST00000394258 RBM12B-AS1Q9P1G2 102 aa11.52□□□□□ -0.57
RCCD1-201ENST00000394258 HYDINQ4G0P3 5121 aa11.48□□□□□ -0.57
RCCD1-201ENST00000394258 Q75L30 129 aa11.48□□□□□ -0.57
RCCD1-201ENST00000394258 IGLV7-46A0A075B6I9 117 aa11.47□□□□□ -0.57
RCCD1-201ENST00000394258 KRTAP10-1P60331 282 aa11.47□□□□□ -0.57
RCCD1-201ENST00000394258 MRPL34Q9BQ48 92 aaKnown RBP11.47□□□□□ -0.57
RCCD1-201ENST00000394258 TP53AIP1Q9HCN2 124 aa11.47□□□□□ -0.57
RCCD1-201ENST00000394258 ATP11AUNQ6ZP68 121 aa11.44□□□□□ -0.58
RCCD1-201ENST00000394258 LOC101927531A0A1B0GV80 90 aa11.43□□□□□ -0.58
RCCD1-201ENST00000394258 LRP1BQ9NZR2 4599 aa11.42□□□□□ -0.58
RCCD1-201ENST00000394258 A6NN06 94 aa11.4□□□□□ -0.58
RCCD1-201ENST00000394258 SPINK7P58062 85 aa11.4□□□□□ -0.58
RCCD1-201ENST00000394258 SSBP3-AS1Q7Z2R9 100 aa11.39□□□□□ -0.59
RCCD1-201ENST00000394258 Q5W150 140 aa11.37□□□□□ -0.59
RCCD1-201ENST00000394258 CDC42SE1Q9NRR8 79 aa11.37□□□□□ -0.59
RCCD1-201ENST00000394258 PKD1P98161 4303 aa11.37□□□□□ -0.59
RCCD1-201ENST00000394258 KRTAP13-2Q52LG2 175 aa11.36□□□□□ -0.59
RCCD1-201ENST00000394258 Q6ZSA8 131 aa11.35□□□□□ -0.59
RCCD1-201ENST00000394258 HRES1P13985 223 aa11.34□□□□□ -0.59
RCCD1-201ENST00000394258 FAT2Q9NYQ8 4349 aa11.34□□□□□ -0.59
RCCD1-201ENST00000394258 LINC01558Q9Y6Z2 57 aa11.32□□□□□ -0.6
RCCD1-201ENST00000394258 PRR26Q8N8Z3 221 aa11.3□□□□□ -0.6
RCCD1-201ENST00000394258 VPS13BQ7Z7G8 4022 aa11.29□□□□□ -0.6
RCCD1-201ENST00000394258 RETNLBQ9BQ08 111 aa11.27□□□□□ -0.6
RCCD1-201ENST00000394258 KRTAP13-3Q3SY46 172 aa11.26□□□□□ -0.61
RCCD1-201ENST00000394258 KRTAP1-4P0C5Y4 121 aa11.24□□□□□ -0.61
RCCD1-201ENST00000394258 LINC00313P59037 77 aa11.24□□□□□ -0.61
RCCD1-201ENST00000394258 C7orf65Q6ZTY9 151 aa11.22□□□□□ -0.61
RCCD1-201ENST00000394258 PKHD1P08F94 4074 aa11.2□□□□□ -0.62
RCCD1-201ENST00000394258 C8orf87E5RJ46 101 aa11.2□□□□□ -0.62
RCCD1-201ENST00000394258 PLA2G1BP04054 148 aaKnown RBP11.2□□□□□ -0.62
RCCD1-201ENST00000394258 PRAC1Q96KF2 57 aa11.18□□□□□ -0.62
RCCD1-201ENST00000394258 ADM2Q7Z4H4 148 aa11.13□□□□□ -0.63
RCCD1-201ENST00000394258 TYMSOSQ8TAI1 123 aa11.12□□□□□ -0.63
RCCD1-201ENST00000394258 C4orf48Q5BLP8 95 aa11.12□□□□□ -0.63
RCCD1-201ENST00000394258 SMR3BP02814 79 aaPredicted RBP11.1□□□□□ -0.63
RCCD1-201ENST00000394258 FAM229AH3BQW9 127 aa11.07□□□□□ -0.64
RCCD1-201ENST00000394258 KRTAP16-1A8MUX0 517 aa11.06□□□□□ -0.64
RCCD1-201ENST00000394258 SACSQ9NZJ4 4579 aa11.04□□□□□ -0.64
RCCD1-201ENST00000394258 SPINK1P00995 79 aa10.99□□□□□ -0.65
RCCD1-201ENST00000394258 IGKV2-30P06310 120 aa10.99□□□□□ -0.65
RCCD1-201ENST00000394258 ACYP2P14621 99 aa10.99□□□□□ -0.65
RCCD1-201ENST00000394258 IGKV2D-30A0A075B6S6 120 aa10.98□□□□□ -0.65
RCCD1-201ENST00000394258 KRTAP21-3Q3LHN1 58 aa10.97□□□□□ -0.65
RCCD1-201ENST00000394258 DMAC1Q96GE9 116 aa10.96□□□□□ -0.66
RCCD1-201ENST00000394258 LINC00304Q8N9R0 145 aa10.94□□□□□ -0.66
RCCD1-201ENST00000394258 DYNC1H1Q14204 4646 aaKnown RBP10.93□□□□□ -0.66
RCCD1-201ENST00000394258 FAT1Q14517 4588 aa10.93□□□□□ -0.66
RCCD1-201ENST00000394258 A0A1B0GU69 56 aa10.92□□□□□ -0.66
RCCD1-201ENST00000394258 A0A1B0GVY2 172 aa10.82□□□□□ -0.68
RCCD1-201ENST00000394258 C9orf92A6NGG3 77 aa10.81□□□□□ -0.68
RCCD1-201ENST00000394258 LINC01554Q52M75 96 aa10.8□□□□□ -0.68
RCCD1-201ENST00000394258 MIR22HGQ0VDD5 57 aa10.8□□□□□ -0.68
RCCD1-201ENST00000394258 SPATA8Q6RVD6 105 aa10.78□□□□□ -0.68
RCCD1-201ENST00000394258 APOBP04114 4563 aaKnown RBP10.77□□□□□ -0.69
RCCD1-201ENST00000394258 H3BS24 57 aa10.76□□□□□ -0.69
RCCD1-201ENST00000394258 KRTAP10-4P60372 401 aaPredicted RBP10.76□□□□□ -0.69
RCCD1-201ENST00000394258 RPS29P62273 56 aaKnown RBP10.74□□□□□ -0.69
RCCD1-201ENST00000394258 UQCR11O14957 56 aa10.73□□□□□ -0.69
RCCD1-201ENST00000394258 Q8N1X5 172 aa10.72□□□□□ -0.69
RCCD1-201ENST00000394258 KMT2CQ8NEZ4 4911 aaKnown RBP10.72□□□□□ -0.69
RCCD1-201ENST00000394258 CSAG1Q6PB30 78 aa10.7□□□□□ -0.7
RCCD1-201ENST00000394258 RYR2Q92736 4967 aa10.67□□□□□ -0.7
RCCD1-201ENST00000394258 PKHD1L1Q86WI1 4243 aa10.64□□□□□ -0.71
RCCD1-201ENST00000394258 FLG2Q5D862 2391 aaPredicted RBP10.6□□□□□ -0.71
RCCD1-201ENST00000394258 A8MUU9 505 aa10.57□□□□□ -0.72
RCCD1-201ENST00000394258 C20orf166-AS1Q96NR2 134 aa10.57□□□□□ -0.72
RCCD1-201ENST00000394258 LRP1Q07954 4544 aaKnown RBP10.54□□□□□ -0.72
RCCD1-201ENST00000394258 DMBT1Q9UGM3 2413 aaPredicted RBP10.52□□□□□ -0.73
RCCD1-201ENST00000394258 KRTAP3-1Q9BYR8 98 aa10.47□□□□□ -0.73
RCCD1-201ENST00000394258 Q5VSD8 79 aa10.41□□□□□ -0.74
RCCD1-201ENST00000394258 HSPG2P98160 4391 aa10.38□□□□□ -0.75
RCCD1-201ENST00000394258 TNXBP22105 4242 aa10.37□□□□□ -0.75
RCCD1-201ENST00000394258 FAT3Q8TDW7 4589 aa10.36□□□□□ -0.75
RCCD1-201ENST00000394258 H0YAA0 97 aa10.36□□□□□ -0.75
RCCD1-201ENST00000394258 KRTAP10-8P60410 259 aa10.34□□□□□ -0.75
RCCD1-201ENST00000394258 CRIPTQ9P021 101 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms